Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:114885342-116045348

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Mit98 7 114917267 to 114917439 172 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 98
Rps4l-ps 7 114926959 to 114927726 767 - pseudogene ribosomal protein S4-like, pseudogene
Cpgi19602 7 114927061 to 114927815 754 CpG island CpG island 19602
Tssr74357 7 114927779 to 114927781 2 - TSS region transcription start site region 74357
Gm22669 7 114936545 to 114936862 317 + unclassified non-coding RNA gene predicted gene, 22669
Gm45020 7 114942122 to 114948497 6375 - lincRNA gene predicted gene 45020
A730082K24Rik 7 114948650 to 114983960 35310 + lincRNA gene RIKEN cDNA A730082K24 gene
Tssr68681 7 115020323 to 115020336 13 + TSS region transcription start site region 68681
Gm34225 7 115031937 to 115066824 34887 + lincRNA gene predicted gene, 34225
Tssr68682 7 115110012 to 115110016 4 + TSS region transcription start site region 68682
Gm34282 7 115132426 to 115171203 38777 + lncRNA gene predicted gene, 34282
Tssr68683 7 115171988 to 115172003 15 + TSS region transcription start site region 68683
Rpl19-ps10 7 115172056 to 115172385 329 + pseudogene ribosomal protein L19, pseudogene 10
Gm27684 7 115172273 to 115172352 79 + miRNA gene predicted gene, 27684
Tssr74358 7 115312914 to 115312919 5 - TSS region transcription start site region 74358
D7Mit99 7 115375979 to 115376135 156 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 99
Gm45999 7 115392184 to 115398303 6119 - lncRNA gene predicted gene, 45999
Tssr68684 7 115465342 to 115465348 6 + TSS region transcription start site region 68684
Sox6 7 115470872 to 116038796 567924 - protein coding gene SRY (sex determining region Y)-box 6
Tssr74359 7 115550575 to 115550601 26 - TSS region transcription start site region 74359
D7Mit253.1 7 115565540 to 115565649 109 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 253.1
D7Dcr48 7 115565680 to 115565778 98 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 48
D7Mit253 7 115565687 to 115565775 88 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 253
Eae26 7 115565687 to 115565775 88 QTL experimental allergic encephalomyelitis susceptibility 26
Tssr74360 7 115597891 to 115597928 37 - TSS region transcription start site region 74360
Tssr74361 7 115664054 to 115664058 4 - TSS region transcription start site region 74361
Tssr74362 7 115697188 to 115697220 32 - TSS region transcription start site region 74362
Tssr74363 7 115698184 to 115698206 22 - TSS region transcription start site region 74363
Tssr74364 7 115722738 to 115722741 3 - TSS region transcription start site region 74364
Tssr74365 7 115725006 to 115725009 3 - TSS region transcription start site region 74365
Tssr74366 7 115737934 to 115737936 2 - TSS region transcription start site region 74366
Asrq7 7 115795739 to 115795739 0 QTL acoustic startle response 7
Tssr74367 7 115824699 to 115824752 53 - TSS region transcription start site region 74367
Tssr74368 7 115841620 to 115841624 4 - TSS region transcription start site region 74368
D7Mit237 7 115842797 to 115842920 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 237
Tssr74369 7 115846080 to 115846112 32 - TSS region transcription start site region 74369
Tssr74370 7 115846118 to 115846154 36 - TSS region transcription start site region 74370
Tssr74371 7 115846158 to 115846159 1 - TSS region transcription start site region 74371
Tssr74372 7 115846162 to 115846173 11 - TSS region transcription start site region 74372
Tssr74373 7 115859820 to 115859846 26 - TSS region transcription start site region 74373
Tssr74374 7 115859847 to 115859864 17 - TSS region transcription start site region 74374
Mdq11 7 115893951 to 115893951 0 QTL mammary ductal QTL 11
Tssr74375 7 115953298 to 115953328 30 - TSS region transcription start site region 74375
Tssr74376 7 115953345 to 115953355 10 - TSS region transcription start site region 74376
Tssr68685 7 115995266 to 115995286 20 + TSS region transcription start site region 68685
Gm45025 7 115995274 to 116014145 18871 + antisense lncRNA gene predicted gene 45025
Tssr74377 7 116030971 to 116031000 29 - TSS region transcription start site region 74377
Tssr74378 7 116031092 to 116031122 30 - TSS region transcription start site region 74378
Cpgi19603 7 116031298 to 116032524 1226 CpG island CpG island 19603
Tssr68686 7 116031920 to 116031932 12 + TSS region transcription start site region 68686
Sox6os 7 116031979 to 116032550 571 + antisense lncRNA gene SRY (sex determining region Y)-box 6, opposite strand
Tssr68687 7 116031996 to 116032009 13 + TSS region transcription start site region 68687
Cpgi19604 7 116033464 to 116034792 1328 CpG island CpG island 19604
Tssr74379 7 116033606 to 116033624 18 - TSS region transcription start site region 74379
Tssr74380 7 116033811 to 116033822 11 - TSS region transcription start site region 74380
Tssr74381 7 116033863 to 116033895 32 - TSS region transcription start site region 74381
Tssr74382 7 116034309 to 116034338 29 - TSS region transcription start site region 74382
Tssr74383 7 116034390 to 116034417 27 - TSS region transcription start site region 74383
Tssr74384 7 116034463 to 116034543 80 - TSS region transcription start site region 74384
Tssr74385 7 116034597 to 116034619 22 - TSS region transcription start site region 74385
Tssr74386 7 116038734 to 116038750 16 - TSS region transcription start site region 74386
Tssr74387 7 116038804 to 116038818 14 - TSS region transcription start site region 74387
Cpgi19605 7 116039427 to 116040499 1072 CpG island CpG island 19605
Tssr74388 7 116039564 to 116039577 13 - TSS region transcription start site region 74388