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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:114432056-115912385

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pde3b 7 114415281 to 114539251 123970 + protein coding gene phosphodiesterase 3B, cGMP-inhibited
Tssr74351 7 114447395 to 114447422 27 - TSS region transcription start site region 74351
Tssr74352 7 114479912 to 114479925 13 - TSS region transcription start site region 74352
Tssr68648 7 114482706 to 114482716 10 + TSS region transcription start site region 68648
Tssr68649 7 114494563 to 114494576 13 + TSS region transcription start site region 68649
Tssr68650 7 114502423 to 114502429 6 + TSS region transcription start site region 68650
Tssr68651 7 114536790 to 114536810 20 + TSS region transcription start site region 68651
Cyp2r1 7 114549682 to 114562972 13290 - protein coding gene cytochrome P450, family 2, subfamily r, polypeptide 1
Cpgi19599 7 114562464 to 114563215 751 CpG island CpG island 19599
Tssr74353 7 114562945 to 114562989 44 - TSS region transcription start site region 74353
Tssr68652 7 114570963 to 114570987 24 + TSS region transcription start site region 68652
Calca 7 114631478 to 114636357 4879 - protein coding gene calcitonin/calcitonin-related polypeptide, alpha
Tssr74354 7 114634140 to 114634158 18 - TSS region transcription start site region 74354
Cpgi19600 7 114635788 to 114636373 585 CpG island CpG island 19600
Tssr74355 7 114636299 to 114636315 16 - TSS region transcription start site region 74355
Tssr2380 7 114667937 to 114667941 4 + TSS region transcription start site region 2380
Tssr68653 7 114698498 to 114698501 3 + TSS region transcription start site region 68653
Gm18599 7 114698520 to 114699644 1124 - pseudogene predicted gene, 18599
Gm15500 7 114705216 to 114706234 1018 - pseudogene predicted pseudogene 15500
Tssr74356 7 114706237 to 114706241 4 - TSS region transcription start site region 74356
Tssr68654 7 114717279 to 114717290 11 + TSS region transcription start site region 68654
Tssr68655 7 114717293 to 114717305 12 + TSS region transcription start site region 68655
Tssr68656 7 114717329 to 114717346 17 + TSS region transcription start site region 68656
Tssr68657 7 114717429 to 114717448 19 + TSS region transcription start site region 68657
Calcb 7 114718643 to 114723365 4722 + protein coding gene calcitonin-related polypeptide, beta
Tssr68658 7 114718643 to 114718661 18 + TSS region transcription start site region 68658
Tssr68659 7 114719586 to 114719621 35 + TSS region transcription start site region 68659
Tssr68660 7 114722191 to 114722208 17 + TSS region transcription start site region 68660
Tssr68661 7 114722244 to 114722259 15 + TSS region transcription start site region 68661
Tssr68662 7 114722451 to 114722483 32 + TSS region transcription start site region 68662
Tssr68663 7 114722781 to 114722795 14 + TSS region transcription start site region 68663
Insc 7 114743694 to 114850383 106689 + protein coding gene INSC spindle orientation adaptor protein
Tssr68664 7 114743715 to 114743733 18 + TSS region transcription start site region 68664
Tssr68665 7 114745526 to 114745536 10 + TSS region transcription start site region 68665
Cpgi19601 7 114745584 to 114745988 404 CpG island CpG island 19601
Tssr68666 7 114745674 to 114745683 9 + TSS region transcription start site region 68666
Tssr68667 7 114745685 to 114745718 33 + TSS region transcription start site region 68667
Tssr68668 7 114745907 to 114745931 24 + TSS region transcription start site region 68668
Tssr68669 7 114745939 to 114745950 11 + TSS region transcription start site region 68669
Tssr68670 7 114753698 to 114753713 15 + TSS region transcription start site region 68670
Tssr68671 7 114753759 to 114753764 5 + TSS region transcription start site region 68671
Tssr68672 7 114753780 to 114753793 13 + TSS region transcription start site region 68672
Tssr68673 7 114753795 to 114753828 33 + TSS region transcription start site region 68673
Tssr68674 7 114753832 to 114753837 5 + TSS region transcription start site region 68674
Tssr68675 7 114768752 to 114768763 11 + TSS region transcription start site region 68675
Tssr68676 7 114768767 to 114768781 14 + TSS region transcription start site region 68676
Tssr68677 7 114768784 to 114768798 14 + TSS region transcription start site region 68677
Tssr68678 7 114768881 to 114768891 10 + TSS region transcription start site region 68678
Gm24982 7 114832383 to 114832514 131 - snoRNA gene predicted gene, 24982
Tssr68679 7 114846304 to 114846323 19 + TSS region transcription start site region 68679
Tssr68680 7 114846325 to 114846338 13 + TSS region transcription start site region 68680
Gm45017 7 114851344 to 114854571 3227 - lincRNA gene predicted gene 45017
D7Mit98 7 114917267 to 114917439 172 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 98
Rps4l-ps 7 114926959 to 114927726 767 - pseudogene ribosomal protein S4-like, pseudogene
Cpgi19602 7 114927061 to 114927815 754 CpG island CpG island 19602
Tssr74357 7 114927779 to 114927781 2 - TSS region transcription start site region 74357
Gm22669 7 114936545 to 114936862 317 + unclassified non-coding RNA gene predicted gene, 22669
Gm45020 7 114942122 to 114948497 6375 - lincRNA gene predicted gene 45020
A730082K24Rik 7 114948650 to 114983960 35310 + lincRNA gene RIKEN cDNA A730082K24 gene
Tssr68681 7 115020323 to 115020336 13 + TSS region transcription start site region 68681
Gm34225 7 115031937 to 115066824 34887 + lincRNA gene predicted gene, 34225
Tssr68682 7 115110012 to 115110016 4 + TSS region transcription start site region 68682
Gm34282 7 115132426 to 115171203 38777 + lncRNA gene predicted gene, 34282
Tssr68683 7 115171988 to 115172003 15 + TSS region transcription start site region 68683
Rpl19-ps10 7 115172056 to 115172385 329 + pseudogene ribosomal protein L19, pseudogene 10
Gm27684 7 115172273 to 115172352 79 + miRNA gene predicted gene, 27684
Tssr74358 7 115312914 to 115312919 5 - TSS region transcription start site region 74358
D7Mit99 7 115375979 to 115376135 156 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 99
Gm45999 7 115392184 to 115398303 6119 - lncRNA gene predicted gene, 45999
Tssr68684 7 115465342 to 115465348 6 + TSS region transcription start site region 68684
Sox6 7 115470872 to 116038796 567924 - protein coding gene SRY (sex determining region Y)-box 6
Tssr74359 7 115550575 to 115550601 26 - TSS region transcription start site region 74359
D7Mit253.1 7 115565540 to 115565649 109 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 253.1
D7Dcr48 7 115565680 to 115565778 98 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 48
D7Mit253 7 115565687 to 115565775 88 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 253
Eae26 7 115565687 to 115565775 88 QTL experimental allergic encephalomyelitis susceptibility 26
Tssr74360 7 115597891 to 115597928 37 - TSS region transcription start site region 74360
Tssr74361 7 115664054 to 115664058 4 - TSS region transcription start site region 74361
Tssr74362 7 115697188 to 115697220 32 - TSS region transcription start site region 74362
Tssr74363 7 115698184 to 115698206 22 - TSS region transcription start site region 74363
Tssr74364 7 115722738 to 115722741 3 - TSS region transcription start site region 74364
Tssr74365 7 115725006 to 115725009 3 - TSS region transcription start site region 74365
Tssr74366 7 115737934 to 115737936 2 - TSS region transcription start site region 74366
Asrq7 7 115795739 to 115795739 0 QTL acoustic startle response 7
Tssr74367 7 115824699 to 115824752 53 - TSS region transcription start site region 74367
Tssr74368 7 115841620 to 115841624 4 - TSS region transcription start site region 74368
D7Mit237 7 115842797 to 115842920 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 237
Tssr74369 7 115846080 to 115846112 32 - TSS region transcription start site region 74369
Tssr74370 7 115846118 to 115846154 36 - TSS region transcription start site region 74370
Tssr74371 7 115846158 to 115846159 1 - TSS region transcription start site region 74371
Tssr74372 7 115846162 to 115846173 11 - TSS region transcription start site region 74372
Tssr74373 7 115859820 to 115859846 26 - TSS region transcription start site region 74373
Tssr74374 7 115859847 to 115859864 17 - TSS region transcription start site region 74374
Mdq11 7 115893951 to 115893951 0 QTL mammary ductal QTL 11