Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:113696375-114666407

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr74334 7 113699769 to 113699771 2 - TSS region transcription start site region 74334
Gm5600 7 113706094 to 113711001 4907 - lincRNA gene predicted gene 5600
Gm29507 7 113729654 to 113752166 22512 + lincRNA gene predicted gene 29507
Tssr2377 7 113760218 to 113760221 3 + TSS region transcription start site region 2377
Cpgi19594 7 113765632 to 113767023 1391 CpG island CpG island 19594
Tssr68625 7 113765775 to 113765795 20 + TSS region transcription start site region 68625
Tssr68626 7 113765837 to 113765847 10 + TSS region transcription start site region 68626
Tssr68627 7 113765906 to 113765911 5 + TSS region transcription start site region 68627
Spon1 7 113765998 to 114043370 277372 + protein coding gene spondin 1, (f-spondin) extracellular matrix protein
Tssr68628 7 113766025 to 113766039 14 + TSS region transcription start site region 68628
Tssr68629 7 113766044 to 113766063 19 + TSS region transcription start site region 68629
Tssr68630 7 113766083 to 113766098 15 + TSS region transcription start site region 68630
Tssr68631 7 113766119 to 113766199 80 + TSS region transcription start site region 68631
Tssr68632 7 113766241 to 113766255 14 + TSS region transcription start site region 68632
Tssr74335 7 113816981 to 113816992 11 - TSS region transcription start site region 74335
Tssr68633 7 114041030 to 114041062 32 + TSS region transcription start site region 68633
Rras2 7 114046782 to 114117781 70999 - protein coding gene related RAS viral (r-ras) oncogene 2
Tssr74336 7 114070172 to 114070192 20 - TSS region transcription start site region 74336
Gm45615 7 114086898 to 114088357 1459 + antisense lncRNA gene predicted gene 45615
Tssr68634 7 114088228 to 114088238 10 + TSS region transcription start site region 68634
Cpgi19595 7 114116727 to 114118181 1454 CpG island CpG island 19595
Tssr74337 7 114117735 to 114117750 15 - TSS region transcription start site region 74337
Tssr74338 7 114117761 to 114117787 26 - TSS region transcription start site region 74338
Tssr68635 7 114139642 to 114139664 22 + TSS region transcription start site region 68635
Tssr2378 7 114152268 to 114152271 3 + TSS region transcription start site region 2378
Tssr2379 7 114152605 to 114152610 5 + TSS region transcription start site region 2379
Tssr68636 7 114181375 to 114181407 32 + TSS region transcription start site region 68636
Gm45454 7 114208634 to 114209088 454 - pseudogene predicted gene 45454
Copb1 7 114215559 to 114254680 39121 - protein coding gene coatomer protein complex, subunit beta 1
Tssr74339 7 114234996 to 114235009 13 - TSS region transcription start site region 74339
Tssr74340 7 114237622 to 114237631 9 - TSS region transcription start site region 74340
Cpgi19596 7 114254060 to 114254884 824 CpG island CpG island 19596
Tssr74341 7 114254648 to 114254657 9 - TSS region transcription start site region 74341
Tssr74342 7 114254659 to 114254733 74 - TSS region transcription start site region 74342
Psma1 7 114264606 to 114276118 11512 - protein coding gene proteasome (prosome, macropain) subunit, alpha type 1
Cpgi19597 7 114275717 to 114276408 691 CpG island CpG island 19597
Tssr74343 7 114276042 to 114276102 60 - TSS region transcription start site region 74343
Tssr74344 7 114276107 to 114276125 18 - TSS region transcription start site region 74344
Tssr68637 7 114276302 to 114276331 29 + TSS region transcription start site region 68637
Tssr68638 7 114290337 to 114290354 17 + TSS region transcription start site region 68638
Tssr68639 7 114291611 to 114291626 15 + TSS region transcription start site region 68639
Tssr68640 7 114297534 to 114297541 7 + TSS region transcription start site region 68640
4933406I18Rik 7 114315479 to 114415161 99682 - lincRNA gene RIKEN cDNA 4933406I18 gene
Tssr68641 7 114316712 to 114316724 12 + TSS region transcription start site region 68641
Tssr74345 7 114317517 to 114317528 11 - TSS region transcription start site region 74345
Tssr68642 7 114317645 to 114317662 17 + TSS region transcription start site region 68642
Tssr68643 7 114317664 to 114317675 11 + TSS region transcription start site region 68643
A930016I07Rik 7 114364335 to 114365214 879 unclassified gene RIKEN cDNA A930016I07 gene
Cpgi19598 7 114414459 to 114416777 2318 CpG island CpG island 19598
Tssr74346 7 114415037 to 114415061 24 - TSS region transcription start site region 74346
Tssr74347 7 114415128 to 114415166 38 - TSS region transcription start site region 74347
Tssr68644 7 114415205 to 114415267 62 + TSS region transcription start site region 68644
Tssr68645 7 114415272 to 114415297 25 + TSS region transcription start site region 68645
Pde3b 7 114415281 to 114539251 123970 + protein coding gene phosphodiesterase 3B, cGMP-inhibited
Tssr68646 7 114415377 to 114415384 7 + TSS region transcription start site region 68646
Tssr74348 7 114416483 to 114416532 49 - TSS region transcription start site region 74348
Tssr74349 7 114416603 to 114416620 17 - TSS region transcription start site region 74349
Tssr74350 7 114416626 to 114416637 11 - TSS region transcription start site region 74350
Tssr68647 7 114416705 to 114416719 14 + TSS region transcription start site region 68647
Tssr74351 7 114447395 to 114447422 27 - TSS region transcription start site region 74351
Tssr74352 7 114479912 to 114479925 13 - TSS region transcription start site region 74352
Tssr68648 7 114482706 to 114482716 10 + TSS region transcription start site region 68648
Tssr68649 7 114494563 to 114494576 13 + TSS region transcription start site region 68649
Tssr68650 7 114502423 to 114502429 6 + TSS region transcription start site region 68650
Tssr68651 7 114536790 to 114536810 20 + TSS region transcription start site region 68651
Cyp2r1 7 114549682 to 114562972 13290 - protein coding gene cytochrome P450, family 2, subfamily r, polypeptide 1
Cpgi19599 7 114562464 to 114563215 751 CpG island CpG island 19599
Tssr74353 7 114562945 to 114562989 44 - TSS region transcription start site region 74353
Tssr68652 7 114570963 to 114570987 24 + TSS region transcription start site region 68652
Calca 7 114631478 to 114636357 4879 - protein coding gene calcitonin/calcitonin-related polypeptide, alpha
Tssr74354 7 114634140 to 114634158 18 - TSS region transcription start site region 74354
Cpgi19600 7 114635788 to 114636373 585 CpG island CpG island 19600
Tssr74355 7 114636299 to 114636315 16 - TSS region transcription start site region 74355