Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:113275998-114533370

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arntl 7 113207465 to 113314126 106661 + protein coding gene aryl hydrocarbon receptor nuclear translocator-like
Tssr68609 7 113289713 to 113289717 4 + TSS region transcription start site region 68609
Gm45355 7 113292944 to 113295337 2393 - antisense lncRNA gene predicted gene 45355
Tssr68610 7 113295320 to 113295333 13 + TSS region transcription start site region 68610
Tssr68611 7 113295487 to 113295511 24 + TSS region transcription start site region 68611
Tssr68612 7 113295515 to 113295526 11 + TSS region transcription start site region 68612
Btbd10 7 113315626 to 113369392 53766 - protein coding gene BTB (POZ) domain containing 10
Gm15994 7 113324258 to 113324659 401 + pseudogene predicted gene 15994
Tssr74325 7 113347273 to 113347293 20 - TSS region transcription start site region 74325
Tssr74326 7 113347376 to 113347413 37 - TSS region transcription start site region 74326
Tssr74327 7 113368543 to 113368549 6 - TSS region transcription start site region 74327
Tssr74328 7 113368811 to 113368839 28 - TSS region transcription start site region 74328
Cpgi19592 7 113368863 to 113370031 1168 CpG island CpG island 19592
Tssr68613 7 113368946 to 113368955 9 + TSS region transcription start site region 68613
Tssr74329 7 113369299 to 113369310 11 - TSS region transcription start site region 74329
Tssr74330 7 113369326 to 113369395 69 - TSS region transcription start site region 74330
Tssr68614 7 113369468 to 113369509 41 + TSS region transcription start site region 68614
Pth 7 113385580 to 113388570 2990 - protein coding gene parathyroid hormone
Tssr74331 7 113388563 to 113388578 15 - TSS region transcription start site region 74331
Tssr68615 7 113392388 to 113392389 1 + TSS region transcription start site region 68615
Tssr68616 7 113419735 to 113419738 3 + TSS region transcription start site region 68616
Gm45614 7 113420374 to 113421094 720 + pseudogene predicted gene 45614
Gm18780 7 113448346 to 113448919 573 - pseudogene predicted gene, 18780
Tssr68617 7 113512817 to 113512820 3 + TSS region transcription start site region 68617
Cpgi19593 7 113513040 to 113514523 1483 CpG island CpG island 19593
Tssr68618 7 113513815 to 113513827 12 + TSS region transcription start site region 68618
Tssr68619 7 113513829 to 113513846 17 + TSS region transcription start site region 68619
Far1 7 113513834 to 113570888 57054 + protein coding gene fatty acyl CoA reductase 1
Tssr68620 7 113513854 to 113513909 55 + TSS region transcription start site region 68620
Tssr68621 7 113514085 to 113514109 24 + TSS region transcription start site region 68621
Tssr68622 7 113514111 to 113514139 28 + TSS region transcription start site region 68622
Tssr68623 7 113514164 to 113514169 5 + TSS region transcription start site region 68623
Far1os 7 113538026 to 113564987 26961 - antisense lncRNA gene fatty acyl CoA reductase 1, opposite strand
Tssr68624 7 113556774 to 113556823 49 + TSS region transcription start site region 68624
Tssr74332 7 113564961 to 113564969 8 - TSS region transcription start site region 74332
Tssr74333 7 113564972 to 113564986 14 - TSS region transcription start site region 74333
Gm33828 7 113592773 to 113593815 1042 + pseudogene predicted gene, 33828
Gm45612 7 113592862 to 113593021 159 + pseudogene predicted gene 45612
Tssr2376 7 113621597 to 113621606 9 + TSS region transcription start site region 2376
Gm23700 7 113666915 to 113667016 101 - miRNA gene predicted gene, 23700
Gm39072 7 113669626 to 113684665 15039 - lncRNA gene predicted gene, 39072
Tssr74334 7 113699769 to 113699771 2 - TSS region transcription start site region 74334
Gm5600 7 113706094 to 113711001 4907 - lincRNA gene predicted gene 5600
Gm29507 7 113729654 to 113752166 22512 + lincRNA gene predicted gene 29507
Tssr2377 7 113760218 to 113760221 3 + TSS region transcription start site region 2377
Cpgi19594 7 113765632 to 113767023 1391 CpG island CpG island 19594
Tssr68625 7 113765775 to 113765795 20 + TSS region transcription start site region 68625
Tssr68626 7 113765837 to 113765847 10 + TSS region transcription start site region 68626
Tssr68627 7 113765906 to 113765911 5 + TSS region transcription start site region 68627
Spon1 7 113765998 to 114043370 277372 + protein coding gene spondin 1, (f-spondin) extracellular matrix protein
Tssr68628 7 113766025 to 113766039 14 + TSS region transcription start site region 68628
Tssr68629 7 113766044 to 113766063 19 + TSS region transcription start site region 68629
Tssr68630 7 113766083 to 113766098 15 + TSS region transcription start site region 68630
Tssr68631 7 113766119 to 113766199 80 + TSS region transcription start site region 68631
Tssr68632 7 113766241 to 113766255 14 + TSS region transcription start site region 68632
Tssr74335 7 113816981 to 113816992 11 - TSS region transcription start site region 74335
Tssr68633 7 114041030 to 114041062 32 + TSS region transcription start site region 68633
Rras2 7 114046782 to 114117781 70999 - protein coding gene related RAS viral (r-ras) oncogene 2
Tssr74336 7 114070172 to 114070192 20 - TSS region transcription start site region 74336
Gm45615 7 114086898 to 114088357 1459 + antisense lncRNA gene predicted gene 45615
Tssr68634 7 114088228 to 114088238 10 + TSS region transcription start site region 68634
Cpgi19595 7 114116727 to 114118181 1454 CpG island CpG island 19595
Tssr74337 7 114117735 to 114117750 15 - TSS region transcription start site region 74337
Tssr74338 7 114117761 to 114117787 26 - TSS region transcription start site region 74338
Tssr68635 7 114139642 to 114139664 22 + TSS region transcription start site region 68635
Tssr2378 7 114152268 to 114152271 3 + TSS region transcription start site region 2378
Tssr2379 7 114152605 to 114152610 5 + TSS region transcription start site region 2379
Tssr68636 7 114181375 to 114181407 32 + TSS region transcription start site region 68636
Gm45454 7 114208634 to 114209088 454 - pseudogene predicted gene 45454
Copb1 7 114215559 to 114254680 39121 - protein coding gene coatomer protein complex, subunit beta 1
Tssr74339 7 114234996 to 114235009 13 - TSS region transcription start site region 74339
Tssr74340 7 114237622 to 114237631 9 - TSS region transcription start site region 74340
Cpgi19596 7 114254060 to 114254884 824 CpG island CpG island 19596
Tssr74341 7 114254648 to 114254657 9 - TSS region transcription start site region 74341
Tssr74342 7 114254659 to 114254733 74 - TSS region transcription start site region 74342
Psma1 7 114264606 to 114276118 11512 - protein coding gene proteasome (prosome, macropain) subunit, alpha type 1
Cpgi19597 7 114275717 to 114276408 691 CpG island CpG island 19597
Tssr74343 7 114276042 to 114276102 60 - TSS region transcription start site region 74343
Tssr74344 7 114276107 to 114276125 18 - TSS region transcription start site region 74344
Tssr68637 7 114276302 to 114276331 29 + TSS region transcription start site region 68637
Tssr68638 7 114290337 to 114290354 17 + TSS region transcription start site region 68638
Tssr68639 7 114291611 to 114291626 15 + TSS region transcription start site region 68639
Tssr68640 7 114297534 to 114297541 7 + TSS region transcription start site region 68640
4933406I18Rik 7 114315479 to 114415161 99682 - lincRNA gene RIKEN cDNA 4933406I18 gene
Tssr68641 7 114316712 to 114316724 12 + TSS region transcription start site region 68641
Tssr74345 7 114317517 to 114317528 11 - TSS region transcription start site region 74345
Tssr68642 7 114317645 to 114317662 17 + TSS region transcription start site region 68642
Tssr68643 7 114317664 to 114317675 11 + TSS region transcription start site region 68643
A930016I07Rik 7 114364335 to 114365214 879 unclassified gene RIKEN cDNA A930016I07 gene
Cpgi19598 7 114414459 to 114416777 2318 CpG island CpG island 19598
Tssr74346 7 114415037 to 114415061 24 - TSS region transcription start site region 74346
Tssr74347 7 114415128 to 114415166 38 - TSS region transcription start site region 74347
Tssr68644 7 114415205 to 114415267 62 + TSS region transcription start site region 68644
Tssr68645 7 114415272 to 114415297 25 + TSS region transcription start site region 68645
Pde3b 7 114415281 to 114539251 123970 + protein coding gene phosphodiesterase 3B, cGMP-inhibited
Tssr68646 7 114415377 to 114415384 7 + TSS region transcription start site region 68646
Tssr74348 7 114416483 to 114416532 49 - TSS region transcription start site region 74348
Tssr74349 7 114416603 to 114416620 17 - TSS region transcription start site region 74349
Tssr74350 7 114416626 to 114416637 11 - TSS region transcription start site region 74350
Tssr68647 7 114416705 to 114416719 14 + TSS region transcription start site region 68647
Tssr74351 7 114447395 to 114447422 27 - TSS region transcription start site region 74351
Tssr74352 7 114479912 to 114479925 13 - TSS region transcription start site region 74352
Tssr68648 7 114482706 to 114482716 10 + TSS region transcription start site region 68648
Tssr68649 7 114494563 to 114494576 13 + TSS region transcription start site region 68649
Tssr68650 7 114502423 to 114502429 6 + TSS region transcription start site region 68650