Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:112456616-113256625

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Parva 7 112427706 to 112591688 163982 + protein coding gene parvin, alpha
Gm45998 7 112459572 to 112465909 6337 + lncRNA gene predicted gene, 45998
Tssr68579 7 112500012 to 112500014 2 + TSS region transcription start site region 68579
Tssr68580 7 112519612 to 112519650 38 + TSS region transcription start site region 68580
Parvaos 7 112526972 to 112535683 8711 - antisense lncRNA gene parvin, alpha, opposite strand
Tssr74321 7 112535560 to 112535577 17 - TSS region transcription start site region 74321
2310014F06Rik 7 112612560 to 112680081 67521 - bidirectional promoter lncRNA gene RIKEN cDNA 2310014F06 gene
Gm24154 7 112618096 to 112618225 129 - snoRNA gene predicted gene, 24154
Gm45473 7 112652782 to 112653397 615 + pseudogene predicted gene 45473
Gm40451 7 112668458 to 112672262 3804 - lncRNA gene predicted gene, 40451
Cpgi19589 7 112678570 to 112680346 1776 CpG island CpG island 19589
Tssr68581 7 112679314 to 112679325 11 + TSS region transcription start site region 68581
Tead1 7 112679320 to 112906805 227485 + protein coding gene TEA domain family member 1
Tssr68582 7 112679327 to 112679373 46 + TSS region transcription start site region 68582
Tssr68583 7 112679378 to 112679387 9 + TSS region transcription start site region 68583
Tssr68584 7 112679401 to 112679422 21 + TSS region transcription start site region 68584
Tssr68585 7 112679426 to 112679431 5 + TSS region transcription start site region 68585
Tssr68586 7 112679443 to 112679466 23 + TSS region transcription start site region 68586
Tssr2374 7 112681050 to 112681069 19 - TSS region transcription start site region 2374
Tssr68587 7 112682725 to 112682729 4 + TSS region transcription start site region 68587
Tssr68588 7 112687222 to 112687225 3 + TSS region transcription start site region 68588
Tssr74322 7 112688510 to 112688520 10 - TSS region transcription start site region 74322
D7Mit370 7 112697610 to 112697705 95 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 370
Gm44462 7 112713951 to 112714079 128 + miRNA gene predicted gene, 44462
Tssr68589 7 112742025 to 112742060 35 + TSS region transcription start site region 68589
Tssr68590 7 112742070 to 112742080 10 + TSS region transcription start site region 68590
Tssr68591 7 112755685 to 112755690 5 + TSS region transcription start site region 68591
Tssr2375 7 112802923 to 112802925 2 + TSS region transcription start site region 2375
Tssr68592 7 112809797 to 112809810 13 + TSS region transcription start site region 68592
Tssr68593 7 112816123 to 112816132 9 + TSS region transcription start site region 68593
Tssr68594 7 112853153 to 112853158 5 + TSS region transcription start site region 68594
Tssr68595 7 112856598 to 112856613 15 + TSS region transcription start site region 68595
Tssr68596 7 112856616 to 112856625 9 + TSS region transcription start site region 68596
Tssr68597 7 112856631 to 112856636 5 + TSS region transcription start site region 68597
Tssr68598 7 112899009 to 112899013 4 + TSS region transcription start site region 68598
Tssr68599 7 112899940 to 112899953 13 + TSS region transcription start site region 68599
Tssr68600 7 112904901 to 112904906 5 + TSS region transcription start site region 68600
Tssr68601 7 112933861 to 112933878 17 + TSS region transcription start site region 68601
D7Mit222 7 112934466 to 112934612 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 222
D7Dcr47 7 112934478 to 112934618 140 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 47
Cia7 7 112934612 to 85716387 -27218225 QTL collagen induced arthritis QTL 7
Cpgi19590 7 112953678 to 112955549 1871 CpG island CpG island 19590
Tssr68602 7 112953955 to 112953975 20 + TSS region transcription start site region 68602
Rassf10 7 112953962 to 112957457 3495 + protein coding gene Ras association (RalGDS/AF-6) domain family (N-terminal) member 10
Gm5599 7 112972096 to 112972883 787 - pseudogene predicted gene 5599
Gm33586 7 112983903 to 113010892 26989 + lincRNA gene predicted gene, 33586
Tssr68603 7 112993896 to 112993908 12 + TSS region transcription start site region 68603
Gm33527 7 112994293 to 113004975 10682 - lncRNA gene predicted gene, 33527
Gm40452 7 113048895 to 113050767 1872 - lncRNA gene predicted gene, 40452
4930543E12Rik 7 113100236 to 113142015 41779 - lincRNA gene RIKEN cDNA 4930543E12 gene
Gm23662 7 113119698 to 113119808 110 + rRNA gene predicted gene, 23662
Gm33659 7 113151601 to 113157621 6020 + lncRNA gene predicted gene, 33659
Cpgi19591 7 113206805 to 113208755 1950 CpG island CpG island 19591
Tssr74323 7 113207092 to 113207111 19 - TSS region transcription start site region 74323
Arntl 7 113207465 to 113314126 106661 + protein coding gene aryl hydrocarbon receptor nuclear translocator-like
Tssr68604 7 113207500 to 113207595 95 + TSS region transcription start site region 68604
Tssr68605 7 113218433 to 113218438 5 + TSS region transcription start site region 68605
Tssr68606 7 113220644 to 113220652 8 + TSS region transcription start site region 68606
Tssr68607 7 113237318 to 113237323 5 + TSS region transcription start site region 68607
Tssr68608 7 113239663 to 113239670 7 + TSS region transcription start site region 68608
Gm33721 7 113243592 to 113262903 19311 - lncRNA gene predicted gene, 33721