Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:111049231-112139245

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctr9 7 111028951 to 111056377 27426 + protein coding gene CTR9 homolog, Paf1/RNA polymerase II complex component
Tssr68537 7 111056777 to 111056781 4 + TSS region transcription start site region 68537
Eif4g2 7 111067985 to 111083030 15045 - protein coding gene eukaryotic translation initiation factor 4, gamma 2
Tssr74281 7 111072730 to 111072765 35 - TSS region transcription start site region 74281
Tssr74282 7 111074062 to 111074104 42 - TSS region transcription start site region 74282
Tssr74283 7 111074477 to 111074514 37 - TSS region transcription start site region 74283
Tssr74284 7 111074722 to 111074745 23 - TSS region transcription start site region 74284
Tssr74285 7 111074818 to 111074838 20 - TSS region transcription start site region 74285
Tssr74286 7 111075611 to 111075669 58 - TSS region transcription start site region 74286
Gm23262 7 111076060 to 111076227 167 - snoRNA gene predicted gene, 23262
Tssr74287 7 111076155 to 111076176 21 - TSS region transcription start site region 74287
Tssr74288 7 111076178 to 111076194 16 - TSS region transcription start site region 74288
Tssr74289 7 111076217 to 111076231 14 - TSS region transcription start site region 74289
Tssr74290 7 111076384 to 111076398 14 - TSS region transcription start site region 74290
Tssr74291 7 111078121 to 111078139 18 - TSS region transcription start site region 74291
Tssr74292 7 111078504 to 111078555 51 - TSS region transcription start site region 74292
Tssr74293 7 111078556 to 111078568 12 - TSS region transcription start site region 74293
Tssr74294 7 111079316 to 111079337 21 - TSS region transcription start site region 74294
Tssr68538 7 111080175 to 111080193 18 + TSS region transcription start site region 68538
Tssr74295 7 111080289 to 111080313 24 - TSS region transcription start site region 74295
Tssr2372 7 111080317 to 111080322 5 - TSS region transcription start site region 2372
Tssr74296 7 111080931 to 111080946 15 - TSS region transcription start site region 74296
Tssr74297 7 111081596 to 111081637 41 - TSS region transcription start site region 74297
Cpgi19582 7 111081971 to 111083602 1631 CpG island CpG island 19582
Tssr74298 7 111082026 to 111082055 29 - TSS region transcription start site region 74298
Tssr74299 7 111082215 to 111082251 36 - TSS region transcription start site region 74299
Tssr74300 7 111082447 to 111082506 59 - TSS region transcription start site region 74300
Tssr74301 7 111082529 to 111082540 11 - TSS region transcription start site region 74301
Tssr74302 7 111082608 to 111082631 23 - TSS region transcription start site region 74302
Tssr74303 7 111082997 to 111083037 40 - TSS region transcription start site region 74303
Tssr68539 7 111083174 to 111083205 31 + TSS region transcription start site region 68539
Tssr68540 7 111083210 to 111083227 17 + TSS region transcription start site region 68540
Tssr68541 7 111083324 to 111083344 20 + TSS region transcription start site region 68541
Gm45378 7 111090106 to 111092816 2710 - unclassified gene predicted gene 45378
1700012D14Rik 7 111117673 to 111122675 5002 - lncRNA gene RIKEN cDNA 1700012D14 gene
Cpgi19583 7 111122057 to 111123204 1147 CpG island CpG island 19583
Tssr68542 7 111122175 to 111122196 21 + TSS region transcription start site region 68542
Tssr74304 7 111122668 to 111122709 41 - TSS region transcription start site region 74304
Tssr68543 7 111122835 to 111122870 35 + TSS region transcription start site region 68543
Tssr68544 7 111156224 to 111156233 9 + TSS region transcription start site region 68544
Gm33098 7 111210366 to 111220995 10629 + lncRNA gene predicted gene, 33098
Gm33145 7 111282910 to 111285680 2770 - lncRNA gene predicted gene, 33145
Tssr68545 7 111325978 to 111325983 5 + TSS region transcription start site region 68545
D7Mit150 7 111329661 to 111329803 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 150
5430402P08Rik 7 111366298 to 111395608 29310 + lincRNA gene RIKEN cDNA 5430402P08 gene
Gm5338 7 111386694 to 111387332 638 - pseudogene predicted gene 5338
Galnt18 7 111471661 to 111779977 308316 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 18
D7Mit356 7 111514329 to 111514441 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 356
D7Mit97 7 111560855 to 111560995 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 97
Tssr74305 7 111593845 to 111593871 26 - TSS region transcription start site region 74305
Tssr74306 7 111593936 to 111593949 13 - TSS region transcription start site region 74306
Tssr74307 7 111593978 to 111593990 12 - TSS region transcription start site region 74307
Tssr74308 7 111594231 to 111594245 14 - TSS region transcription start site region 74308
Tssr2373 7 111692814 to 111692852 38 - TSS region transcription start site region 2373
Tssr74309 7 111735948 to 111735976 28 - TSS region transcription start site region 74309
Tssr74310 7 111736017 to 111736044 27 - TSS region transcription start site region 74310
Tssr74311 7 111736047 to 111736064 17 - TSS region transcription start site region 74311
Tssr74312 7 111736141 to 111736153 12 - TSS region transcription start site region 74312
Cpgi19584 7 111778958 to 111780330 1372 CpG island CpG island 19584
Tssr74313 7 111779963 to 111779993 30 - TSS region transcription start site region 74313
Tssr74314 7 111780054 to 111780068 14 - TSS region transcription start site region 74314
Gm25787 7 111792920 to 111793011 91 - miRNA gene predicted gene, 25787
Gm45588 7 111857926 to 111858555 629 - pseudogene predicted gene 45588
Gm23345 7 111947181 to 111947330 149 - snRNA gene predicted gene, 23345
Tssr74315 7 112003823 to 112003828 5 - TSS region transcription start site region 74315
Gm33204 7 112009776 to 112012475 2699 + lncRNA gene predicted gene, 33204
Gm3960 7 112021951 to 112023495 1544 - unclassified gene predicted gene 3960
Cpgi19585 7 112022903 to 112024168 1265 CpG island CpG island 19585
Tssr68546 7 112023251 to 112023317 66 + TSS region transcription start site region 68546
Tssr68547 7 112023433 to 112023444 11 + TSS region transcription start site region 68547
Tssr68548 7 112023447 to 112023462 15 + TSS region transcription start site region 68548
Tssr68549 7 112023469 to 112023566 97 + TSS region transcription start site region 68549
Usp47 7 112023483 to 112111386 87903 + protein coding gene ubiquitin specific peptidase 47
Tssr68550 7 112023577 to 112023590 13 + TSS region transcription start site region 68550
Tssr74316 7 112024045 to 112024073 28 - TSS region transcription start site region 74316
Tssr74317 7 112024111 to 112024154 43 - TSS region transcription start site region 74317
Tssr68551 7 112074651 to 112074677 26 + TSS region transcription start site region 68551
Tssr68552 7 112077836 to 112077849 13 + TSS region transcription start site region 68552
Tssr68553 7 112082461 to 112082494 33 + TSS region transcription start site region 68553
D7Ertd602e 7 112082811 to 112083043 232 DNA segment DNA segment, Chr 7, ERATO Doi 602, expressed
Tssr68554 7 112083116 to 112083141 25 + TSS region transcription start site region 68554
Tssr68555 7 112093077 to 112093127 50 + TSS region transcription start site region 68555
Dkk3 7 112116017 to 112159057 43040 - protein coding gene dickkopf WNT signaling pathway inhibitor 3