Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:110812169-111152180

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ampd3 7 110768206 to 110812405 44199 + protein coding gene adenosine monophosphate deaminase 3
Rnf141 7 110800432 to 110844457 44025 - protein coding gene ring finger protein 141
Cpgi19580 7 110843898 to 110844569 671 CpG island CpG island 19580
Tssr74268 7 110844376 to 110844451 75 - TSS region transcription start site region 74268
Lyve1 7 110850607 to 110862953 12346 - protein coding gene lymphatic vessel endothelial hyaluronan receptor 1
Tssr74269 7 110851618 to 110851631 13 - TSS region transcription start site region 74269
Tssr2370 7 110859660 to 110859691 31 - TSS region transcription start site region 2370
Tssr74270 7 110862921 to 110862938 17 - TSS region transcription start site region 74270
Tssr74271 7 110862944 to 110862960 16 - TSS region transcription start site region 74271
Tssr74272 7 110862963 to 110862970 7 - TSS region transcription start site region 74272
Tssr2371 7 110863014 to 110863024 10 - TSS region transcription start site region 2371
Tssr74273 7 110863247 to 110863253 6 - TSS region transcription start site region 74273
Mrvi1 7 110868266 to 110982461 114195 - protein coding gene MRV integration site 1
Gm16336 7 110904985 to 110905851 866 + antisense lncRNA gene predicted gene 16336
Tssr74274 7 110926679 to 110926705 26 - TSS region transcription start site region 74274
Tssr68528 7 110951033 to 110951080 47 + TSS region transcription start site region 68528
Tssr68529 7 110955961 to 110955975 14 + TSS region transcription start site region 68529
Tssr74275 7 110956881 to 110956892 11 - TSS region transcription start site region 74275
Tssr74276 7 110982049 to 110982108 59 - TSS region transcription start site region 74276
Tssr74277 7 110982169 to 110982180 11 - TSS region transcription start site region 74277
Tssr74278 7 110982443 to 110982468 25 - TSS region transcription start site region 74278
Tssr74279 7 110982472 to 110982483 11 - TSS region transcription start site region 74279
Tssr74280 7 110990387 to 110990390 3 - TSS region transcription start site region 74280
Tssr68530 7 111025101 to 111025123 22 + TSS region transcription start site region 68530
Cpgi19581 7 111028637 to 111029468 831 CpG island CpG island 19581
Tssr68531 7 111028737 to 111028750 13 + TSS region transcription start site region 68531
Tssr68532 7 111028765 to 111028785 20 + TSS region transcription start site region 68532
Ctr9 7 111028951 to 111056377 27426 + protein coding gene CTR9 homolog, Paf1/RNA polymerase II complex component
Tssr68533 7 111028961 to 111028972 11 + TSS region transcription start site region 68533
Tssr68534 7 111028979 to 111029005 26 + TSS region transcription start site region 68534
Tssr68535 7 111029007 to 111029018 11 + TSS region transcription start site region 68535
Tssr68536 7 111029019 to 111029030 11 + TSS region transcription start site region 68536
Tssr68537 7 111056777 to 111056781 4 + TSS region transcription start site region 68537
Eif4g2 7 111067985 to 111083030 15045 - protein coding gene eukaryotic translation initiation factor 4, gamma 2
Tssr74281 7 111072730 to 111072765 35 - TSS region transcription start site region 74281
Tssr74282 7 111074062 to 111074104 42 - TSS region transcription start site region 74282
Tssr74283 7 111074477 to 111074514 37 - TSS region transcription start site region 74283
Tssr74284 7 111074722 to 111074745 23 - TSS region transcription start site region 74284
Tssr74285 7 111074818 to 111074838 20 - TSS region transcription start site region 74285
Tssr74286 7 111075611 to 111075669 58 - TSS region transcription start site region 74286
Gm23262 7 111076060 to 111076227 167 - snoRNA gene predicted gene, 23262
Tssr74287 7 111076155 to 111076176 21 - TSS region transcription start site region 74287
Tssr74288 7 111076178 to 111076194 16 - TSS region transcription start site region 74288
Tssr74289 7 111076217 to 111076231 14 - TSS region transcription start site region 74289
Tssr74290 7 111076384 to 111076398 14 - TSS region transcription start site region 74290
Tssr74291 7 111078121 to 111078139 18 - TSS region transcription start site region 74291
Tssr74292 7 111078504 to 111078555 51 - TSS region transcription start site region 74292
Tssr74293 7 111078556 to 111078568 12 - TSS region transcription start site region 74293
Tssr74294 7 111079316 to 111079337 21 - TSS region transcription start site region 74294
Tssr68538 7 111080175 to 111080193 18 + TSS region transcription start site region 68538
Tssr74295 7 111080289 to 111080313 24 - TSS region transcription start site region 74295
Tssr2372 7 111080317 to 111080322 5 - TSS region transcription start site region 2372
Tssr74296 7 111080931 to 111080946 15 - TSS region transcription start site region 74296
Tssr74297 7 111081596 to 111081637 41 - TSS region transcription start site region 74297
Cpgi19582 7 111081971 to 111083602 1631 CpG island CpG island 19582
Tssr74298 7 111082026 to 111082055 29 - TSS region transcription start site region 74298
Tssr74299 7 111082215 to 111082251 36 - TSS region transcription start site region 74299
Tssr74300 7 111082447 to 111082506 59 - TSS region transcription start site region 74300
Tssr74301 7 111082529 to 111082540 11 - TSS region transcription start site region 74301
Tssr74302 7 111082608 to 111082631 23 - TSS region transcription start site region 74302
Tssr74303 7 111082997 to 111083037 40 - TSS region transcription start site region 74303
Tssr68539 7 111083174 to 111083205 31 + TSS region transcription start site region 68539
Tssr68540 7 111083210 to 111083227 17 + TSS region transcription start site region 68540
Tssr68541 7 111083324 to 111083344 20 + TSS region transcription start site region 68541
Gm45378 7 111090106 to 111092816 2710 - unclassified gene predicted gene 45378
1700012D14Rik 7 111117673 to 111122675 5002 - lncRNA gene RIKEN cDNA 1700012D14 gene
Cpgi19583 7 111122057 to 111123204 1147 CpG island CpG island 19583
Tssr68542 7 111122175 to 111122196 21 + TSS region transcription start site region 68542
Tssr74304 7 111122668 to 111122709 41 - TSS region transcription start site region 74304
Tssr68543 7 111122835 to 111122870 35 + TSS region transcription start site region 68543