Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:110558936-112628949

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213 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sbf2 7 110308013 to 110614922 306909 - protein coding gene SET binding factor 2
Gm46027 7 110598953 to 110602925 3972 - lncRNA gene predicted gene, 46027
Tssr74260 7 110611659 to 110611662 3 - TSS region transcription start site region 74260
Cpgi19574 7 110614042 to 110615520 1478 CpG island CpG island 19574
Tssr68499 7 110614331 to 110614351 20 + TSS region transcription start site region 68499
Tssr74261 7 110614888 to 110614928 40 - TSS region transcription start site region 74261
Cpgi19575 7 110626252 to 110626613 361 CpG island CpG island 19575
Gm28863 7 110626281 to 110639358 13077 - antisense lncRNA gene predicted gene 28863
Cpgi19576 7 110627486 to 110627790 304 CpG island CpG island 19576
Tssr68500 7 110627650 to 110627666 16 + TSS region transcription start site region 68500
Adm 7 110627669 to 110629819 2150 + protein coding gene adrenomedullin
Cpgi19577 7 110627935 to 110629272 1337 CpG island CpG island 19577
Tssr68501 7 110628534 to 110628545 11 + TSS region transcription start site region 68501
Tssr68502 7 110629526 to 110629531 5 + TSS region transcription start site region 68502
Cpgi19578 7 110630305 to 110630803 498 CpG island CpG island 19578
Tssr74262 7 110648729 to 110648738 9 - TSS region transcription start site region 74262
Tssr74263 7 110648766 to 110648784 18 - TSS region transcription start site region 74263
Tssr74264 7 110648817 to 110648833 16 - TSS region transcription start site region 74264
Gm21123 7 110690163 to 110699732 9569 - lincRNA gene predicted gene, 21123
Gm18907 7 110712972 to 110713492 520 - pseudogene predicted gene, 18907
Gm39068 7 110739661 to 110743500 3839 + lncRNA gene predicted gene, 39068
D7Mit369 7 110756413 to 110756537 124 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 369
B430319F04Rik 7 110766677 to 110769345 2668 - unclassified gene RIKEN cDNA B430319F04 gene
Tssr68503 7 110768063 to 110768100 37 + TSS region transcription start site region 68503
Cpgi19579 7 110768083 to 110769233 1150 CpG island CpG island 19579
Tssr68504 7 110768106 to 110768127 21 + TSS region transcription start site region 68504
Tssr68505 7 110768138 to 110768156 18 + TSS region transcription start site region 68505
Tssr68506 7 110768169 to 110768193 24 + TSS region transcription start site region 68506
Ampd3 7 110768206 to 110812405 44199 + protein coding gene adenosine monophosphate deaminase 3
Tssr68507 7 110768615 to 110768634 19 + TSS region transcription start site region 68507
Tssr68508 7 110768830 to 110768847 17 + TSS region transcription start site region 68508
Tssr74265 7 110769301 to 110769365 64 - TSS region transcription start site region 74265
Tssr68509 7 110770626 to 110770633 7 + TSS region transcription start site region 68509
Tssr68510 7 110772732 to 110772754 22 + TSS region transcription start site region 68510
Tssr68511 7 110772762 to 110772767 5 + TSS region transcription start site region 68511
Tssr68512 7 110772782 to 110772793 11 + TSS region transcription start site region 68512
Tssr68513 7 110772806 to 110772807 1 + TSS region transcription start site region 68513
Tssr68514 7 110772841 to 110772857 16 + TSS region transcription start site region 68514
Tssr74266 7 110773278 to 110773302 24 - TSS region transcription start site region 74266
Tssr68515 7 110773405 to 110773423 18 + TSS region transcription start site region 68515
Tssr68516 7 110773618 to 110773641 23 + TSS region transcription start site region 68516
Tssr68517 7 110773658 to 110773685 27 + TSS region transcription start site region 68517
Tssr68518 7 110773850 to 110773862 12 + TSS region transcription start site region 68518
Tssr68519 7 110773866 to 110773934 68 + TSS region transcription start site region 68519
Tssr68520 7 110774240 to 110774252 12 + TSS region transcription start site region 68520
Tssr68521 7 110777554 to 110777574 20 + TSS region transcription start site region 68521
Tssr68522 7 110777653 to 110777697 44 + TSS region transcription start site region 68522
Gm39069 7 110779268 to 110782800 3532 - lncRNA gene predicted gene, 39069
Tssr68523 7 110783493 to 110783496 3 + TSS region transcription start site region 68523
Tssr74267 7 110785129 to 110785135 6 - TSS region transcription start site region 74267
Ssial3 7 110792641 to 110792834 193 QTL susceptibility to sialadenitis 3
D7Mit53 7 110792641 to 110792834 193 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 53
Rnf141 7 110800432 to 110844457 44025 - protein coding gene ring finger protein 141
Gm47282 7 110802481 to 110802587 106 + miRNA gene predicted gene, 47282
Tssr68524 7 110803088 to 110803101 13 + TSS region transcription start site region 68524
Tssr68525 7 110806159 to 110806186 27 + TSS region transcription start site region 68525
Tssr68526 7 110808803 to 110808821 18 + TSS region transcription start site region 68526
Tssr68527 7 110808825 to 110808854 29 + TSS region transcription start site region 68527
Cpgi19580 7 110843898 to 110844569 671 CpG island CpG island 19580
Tssr74268 7 110844376 to 110844451 75 - TSS region transcription start site region 74268
Lyve1 7 110850607 to 110862953 12346 - protein coding gene lymphatic vessel endothelial hyaluronan receptor 1
Tssr74269 7 110851618 to 110851631 13 - TSS region transcription start site region 74269
Tssr2370 7 110859660 to 110859691 31 - TSS region transcription start site region 2370
Tssr74270 7 110862921 to 110862938 17 - TSS region transcription start site region 74270
Tssr74271 7 110862944 to 110862960 16 - TSS region transcription start site region 74271
Tssr74272 7 110862963 to 110862970 7 - TSS region transcription start site region 74272
Tssr2371 7 110863014 to 110863024 10 - TSS region transcription start site region 2371
Tssr74273 7 110863247 to 110863253 6 - TSS region transcription start site region 74273
Mrvi1 7 110868266 to 110982461 114195 - protein coding gene MRV integration site 1
Gm16336 7 110904985 to 110905851 866 + antisense lncRNA gene predicted gene 16336
Tssr74274 7 110926679 to 110926705 26 - TSS region transcription start site region 74274
Tssr68528 7 110951033 to 110951080 47 + TSS region transcription start site region 68528
Tssr68529 7 110955961 to 110955975 14 + TSS region transcription start site region 68529
Tssr74275 7 110956881 to 110956892 11 - TSS region transcription start site region 74275
Tssr74276 7 110982049 to 110982108 59 - TSS region transcription start site region 74276
Tssr74277 7 110982169 to 110982180 11 - TSS region transcription start site region 74277
Tssr74278 7 110982443 to 110982468 25 - TSS region transcription start site region 74278
Tssr74279 7 110982472 to 110982483 11 - TSS region transcription start site region 74279
Tssr74280 7 110990387 to 110990390 3 - TSS region transcription start site region 74280
Tssr68530 7 111025101 to 111025123 22 + TSS region transcription start site region 68530
Cpgi19581 7 111028637 to 111029468 831 CpG island CpG island 19581
Tssr68531 7 111028737 to 111028750 13 + TSS region transcription start site region 68531
Tssr68532 7 111028765 to 111028785 20 + TSS region transcription start site region 68532
Ctr9 7 111028951 to 111056377 27426 + protein coding gene CTR9 homolog, Paf1/RNA polymerase II complex component
Tssr68533 7 111028961 to 111028972 11 + TSS region transcription start site region 68533
Tssr68534 7 111028979 to 111029005 26 + TSS region transcription start site region 68534
Tssr68535 7 111029007 to 111029018 11 + TSS region transcription start site region 68535
Tssr68536 7 111029019 to 111029030 11 + TSS region transcription start site region 68536
Tssr68537 7 111056777 to 111056781 4 + TSS region transcription start site region 68537
Eif4g2 7 111067985 to 111083030 15045 - protein coding gene eukaryotic translation initiation factor 4, gamma 2
Tssr74281 7 111072730 to 111072765 35 - TSS region transcription start site region 74281
Tssr74282 7 111074062 to 111074104 42 - TSS region transcription start site region 74282
Tssr74283 7 111074477 to 111074514 37 - TSS region transcription start site region 74283
Tssr74284 7 111074722 to 111074745 23 - TSS region transcription start site region 74284
Tssr74285 7 111074818 to 111074838 20 - TSS region transcription start site region 74285
Tssr74286 7 111075611 to 111075669 58 - TSS region transcription start site region 74286
Gm23262 7 111076060 to 111076227 167 - snoRNA gene predicted gene, 23262
Tssr74287 7 111076155 to 111076176 21 - TSS region transcription start site region 74287
Tssr74288 7 111076178 to 111076194 16 - TSS region transcription start site region 74288
Tssr74289 7 111076217 to 111076231 14 - TSS region transcription start site region 74289
Tssr74290 7 111076384 to 111076398 14 - TSS region transcription start site region 74290
Tssr74291 7 111078121 to 111078139 18 - TSS region transcription start site region 74291
Tssr74292 7 111078504 to 111078555 51 - TSS region transcription start site region 74292
Tssr74293 7 111078556 to 111078568 12 - TSS region transcription start site region 74293
Tssr74294 7 111079316 to 111079337 21 - TSS region transcription start site region 74294
Tssr68538 7 111080175 to 111080193 18 + TSS region transcription start site region 68538
Tssr74295 7 111080289 to 111080313 24 - TSS region transcription start site region 74295
Tssr2372 7 111080317 to 111080322 5 - TSS region transcription start site region 2372
Tssr74296 7 111080931 to 111080946 15 - TSS region transcription start site region 74296
Tssr74297 7 111081596 to 111081637 41 - TSS region transcription start site region 74297
Cpgi19582 7 111081971 to 111083602 1631 CpG island CpG island 19582
Tssr74298 7 111082026 to 111082055 29 - TSS region transcription start site region 74298
Tssr74299 7 111082215 to 111082251 36 - TSS region transcription start site region 74299
Tssr74300 7 111082447 to 111082506 59 - TSS region transcription start site region 74300
Tssr74301 7 111082529 to 111082540 11 - TSS region transcription start site region 74301
Tssr74302 7 111082608 to 111082631 23 - TSS region transcription start site region 74302
Tssr74303 7 111082997 to 111083037 40 - TSS region transcription start site region 74303
Tssr68539 7 111083174 to 111083205 31 + TSS region transcription start site region 68539
Tssr68540 7 111083210 to 111083227 17 + TSS region transcription start site region 68540
Tssr68541 7 111083324 to 111083344 20 + TSS region transcription start site region 68541
Gm45378 7 111090106 to 111092816 2710 - unclassified gene predicted gene 45378
1700012D14Rik 7 111117673 to 111122675 5002 - lncRNA gene RIKEN cDNA 1700012D14 gene
Cpgi19583 7 111122057 to 111123204 1147 CpG island CpG island 19583
Tssr68542 7 111122175 to 111122196 21 + TSS region transcription start site region 68542
Tssr74304 7 111122668 to 111122709 41 - TSS region transcription start site region 74304
Tssr68543 7 111122835 to 111122870 35 + TSS region transcription start site region 68543
Tssr68544 7 111156224 to 111156233 9 + TSS region transcription start site region 68544
Gm33098 7 111210366 to 111220995 10629 + lncRNA gene predicted gene, 33098
Gm33145 7 111282910 to 111285680 2770 - lncRNA gene predicted gene, 33145
Tssr68545 7 111325978 to 111325983 5 + TSS region transcription start site region 68545
D7Mit150 7 111329661 to 111329803 142 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 150
5430402P08Rik 7 111366298 to 111395608 29310 + lincRNA gene RIKEN cDNA 5430402P08 gene
Gm5338 7 111386694 to 111387332 638 - pseudogene predicted gene 5338
Galnt18 7 111471661 to 111779977 308316 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 18
D7Mit356 7 111514329 to 111514441 112 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 356
D7Mit97 7 111560855 to 111560995 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 97
Tssr74305 7 111593845 to 111593871 26 - TSS region transcription start site region 74305
Tssr74306 7 111593936 to 111593949 13 - TSS region transcription start site region 74306
Tssr74307 7 111593978 to 111593990 12 - TSS region transcription start site region 74307
Tssr74308 7 111594231 to 111594245 14 - TSS region transcription start site region 74308
Tssr2373 7 111692814 to 111692852 38 - TSS region transcription start site region 2373
Tssr74309 7 111735948 to 111735976 28 - TSS region transcription start site region 74309
Tssr74310 7 111736017 to 111736044 27 - TSS region transcription start site region 74310
Tssr74311 7 111736047 to 111736064 17 - TSS region transcription start site region 74311
Tssr74312 7 111736141 to 111736153 12 - TSS region transcription start site region 74312
Cpgi19584 7 111778958 to 111780330 1372 CpG island CpG island 19584
Tssr74313 7 111779963 to 111779993 30 - TSS region transcription start site region 74313
Tssr74314 7 111780054 to 111780068 14 - TSS region transcription start site region 74314
Gm25787 7 111792920 to 111793011 91 - miRNA gene predicted gene, 25787
Gm45588 7 111857926 to 111858555 629 - pseudogene predicted gene 45588
Gm23345 7 111947181 to 111947330 149 - snRNA gene predicted gene, 23345
Tssr74315 7 112003823 to 112003828 5 - TSS region transcription start site region 74315
Gm33204 7 112009776 to 112012475 2699 + lncRNA gene predicted gene, 33204
Gm3960 7 112021951 to 112023495 1544 - unclassified gene predicted gene 3960
Cpgi19585 7 112022903 to 112024168 1265 CpG island CpG island 19585
Tssr68546 7 112023251 to 112023317 66 + TSS region transcription start site region 68546
Tssr68547 7 112023433 to 112023444 11 + TSS region transcription start site region 68547
Tssr68548 7 112023447 to 112023462 15 + TSS region transcription start site region 68548
Tssr68549 7 112023469 to 112023566 97 + TSS region transcription start site region 68549
Usp47 7 112023483 to 112111386 87903 + protein coding gene ubiquitin specific peptidase 47
Tssr68550 7 112023577 to 112023590 13 + TSS region transcription start site region 68550
Tssr74316 7 112024045 to 112024073 28 - TSS region transcription start site region 74316
Tssr74317 7 112024111 to 112024154 43 - TSS region transcription start site region 74317
Tssr68551 7 112074651 to 112074677 26 + TSS region transcription start site region 68551
Tssr68552 7 112077836 to 112077849 13 + TSS region transcription start site region 68552
Tssr68553 7 112082461 to 112082494 33 + TSS region transcription start site region 68553
D7Ertd602e 7 112082811 to 112083043 232 DNA segment DNA segment, Chr 7, ERATO Doi 602, expressed
Tssr68554 7 112083116 to 112083141 25 + TSS region transcription start site region 68554
Tssr68555 7 112093077 to 112093127 50 + TSS region transcription start site region 68555
Dkk3 7 112116017 to 112159057 43040 - protein coding gene dickkopf WNT signaling pathway inhibitor 3
Tssr74318 7 112140390 to 112140401 11 - TSS region transcription start site region 74318
Cpgi19586 7 112158257 to 112158481 224 CpG island CpG island 19586
Tssr74319 7 112158403 to 112158458 55 - TSS region transcription start site region 74319
Tssr74320 7 112159034 to 112159095 61 - TSS region transcription start site region 74320
Gm39071 7 112186831 to 112187850 1019 - lncRNA gene predicted gene, 39071
Gm39070 7 112199555 to 112203992 4437 + lncRNA gene predicted gene, 39070
D7Mit281 7 112212330 to 112212440 110 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 281
Gm33247 7 112216936 to 112217834 898 + lncRNA gene predicted gene, 33247
Cpgi19587 7 112225395 to 112226643 1248 CpG island CpG island 19587
Mical2 7 112225836 to 112355194 129358 + protein coding gene microtubule associated monooxygenase, calponin and LIM domain containing 2
Tssr68556 7 112225837 to 112225848 11 + TSS region transcription start site region 68556
Tssr68557 7 112225857 to 112225900 43 + TSS region transcription start site region 68557
Tssr68558 7 112226751 to 112226789 38 + TSS region transcription start site region 68558
Tssr68559 7 112238502 to 112238513 11 + TSS region transcription start site region 68559
Tssr68560 7 112238527 to 112238538 11 + TSS region transcription start site region 68560
Tssr68561 7 112241863 to 112241874 11 + TSS region transcription start site region 68561
Tssr68562 7 112283647 to 112283652 5 + TSS region transcription start site region 68562
Tssr68563 7 112310600 to 112310604 4 + TSS region transcription start site region 68563
Tssr68564 7 112336593 to 112336606 13 + TSS region transcription start site region 68564
Tssr68565 7 112342399 to 112342403 4 + TSS region transcription start site region 68565
Tssr68566 7 112354559 to 112354572 13 + TSS region transcription start site region 68566
Tssr68567 7 112354823 to 112354840 17 + TSS region transcription start site region 68567
Tssr68568 7 112361633 to 112361645 12 + TSS region transcription start site region 68568
Micalcl 7 112368308 to 112413104 44796 + protein coding gene MICAL C-terminal like
Tssr68569 7 112374839 to 112374864 25 + TSS region transcription start site region 68569
Tssr68570 7 112375213 to 112375259 46 + TSS region transcription start site region 68570
Tssr68571 7 112391195 to 112391210 15 + TSS region transcription start site region 68571
Tssr68572 7 112391249 to 112391269 20 + TSS region transcription start site region 68572
Tssr68573 7 112427025 to 112427038 13 + TSS region transcription start site region 68573
Cpgi19588 7 112427500 to 112428458 958 CpG island CpG island 19588