Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:110186659-111036662

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109 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19573 7 110221564 to 110222304 740 CpG island CpG island 19573
Tssr68493 7 110221697 to 110221708 11 + TSS region transcription start site region 68493
Swap70 7 110221711 to 110283506 61795 + protein coding gene SWA-70 protein
Tssr68494 7 110221724 to 110221739 15 + TSS region transcription start site region 68494
Tssr68495 7 110221742 to 110221766 24 + TSS region transcription start site region 68495
Tssr68496 7 110237739 to 110237741 2 + TSS region transcription start site region 68496
Tssr68497 7 110237878 to 110237881 3 + TSS region transcription start site region 68497
Tssr68498 7 110241605 to 110241609 4 + TSS region transcription start site region 68498
Tssr2369 7 110243570 to 110243574 4 + TSS region transcription start site region 2369
Gm45515 7 110277782 to 110281527 3745 - antisense lncRNA gene predicted gene 45515
Gm32861 7 110285502 to 110289142 3640 - lncRNA gene predicted gene, 32861
Tssr74255 7 110288228 to 110288236 8 - TSS region transcription start site region 74255
Tssr74256 7 110293463 to 110293467 4 - TSS region transcription start site region 74256
Gm9132 7 110302001 to 110302832 831 + pseudogene predicted gene 9132
D7Mit328 7 110302821 to 110302932 111 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 328
Sbf2 7 110308013 to 110614922 306909 - protein coding gene SET binding factor 2
Tssr74257 7 110372653 to 110372696 43 - TSS region transcription start site region 74257
Tssr74258 7 110372712 to 110372724 12 - TSS region transcription start site region 74258
Gm9064 7 110425070 to 110425602 532 + pseudogene predicted gene 9064
Tssr74259 7 110464634 to 110464667 33 - TSS region transcription start site region 74259
Gm17219 7 110522066 to 110522658 592 + pseudogene predicted gene 17219
Gm10087 7 110526792 to 110527121 329 + pseudogene predicted gene 10087
Gm46027 7 110598953 to 110602925 3972 - lncRNA gene predicted gene, 46027
Tssr74260 7 110611659 to 110611662 3 - TSS region transcription start site region 74260
Cpgi19574 7 110614042 to 110615520 1478 CpG island CpG island 19574
Tssr68499 7 110614331 to 110614351 20 + TSS region transcription start site region 68499
Tssr74261 7 110614888 to 110614928 40 - TSS region transcription start site region 74261
Cpgi19575 7 110626252 to 110626613 361 CpG island CpG island 19575
Gm28863 7 110626281 to 110639358 13077 - antisense lncRNA gene predicted gene 28863
Cpgi19576 7 110627486 to 110627790 304 CpG island CpG island 19576
Tssr68500 7 110627650 to 110627666 16 + TSS region transcription start site region 68500
Adm 7 110627669 to 110629819 2150 + protein coding gene adrenomedullin
Cpgi19577 7 110627935 to 110629272 1337 CpG island CpG island 19577
Tssr68501 7 110628534 to 110628545 11 + TSS region transcription start site region 68501
Tssr68502 7 110629526 to 110629531 5 + TSS region transcription start site region 68502
Cpgi19578 7 110630305 to 110630803 498 CpG island CpG island 19578
Tssr74262 7 110648729 to 110648738 9 - TSS region transcription start site region 74262
Tssr74263 7 110648766 to 110648784 18 - TSS region transcription start site region 74263
Tssr74264 7 110648817 to 110648833 16 - TSS region transcription start site region 74264
Gm21123 7 110690163 to 110699732 9569 - lincRNA gene predicted gene, 21123
Gm18907 7 110712972 to 110713492 520 - pseudogene predicted gene, 18907
Gm39068 7 110739661 to 110743500 3839 + lncRNA gene predicted gene, 39068
D7Mit369 7 110756413 to 110756537 124 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 369
B430319F04Rik 7 110766677 to 110769345 2668 - unclassified gene RIKEN cDNA B430319F04 gene
Tssr68503 7 110768063 to 110768100 37 + TSS region transcription start site region 68503
Cpgi19579 7 110768083 to 110769233 1150 CpG island CpG island 19579
Tssr68504 7 110768106 to 110768127 21 + TSS region transcription start site region 68504
Tssr68505 7 110768138 to 110768156 18 + TSS region transcription start site region 68505
Tssr68506 7 110768169 to 110768193 24 + TSS region transcription start site region 68506
Ampd3 7 110768206 to 110812405 44199 + protein coding gene adenosine monophosphate deaminase 3
Tssr68507 7 110768615 to 110768634 19 + TSS region transcription start site region 68507
Tssr68508 7 110768830 to 110768847 17 + TSS region transcription start site region 68508
Tssr74265 7 110769301 to 110769365 64 - TSS region transcription start site region 74265
Tssr68509 7 110770626 to 110770633 7 + TSS region transcription start site region 68509
Tssr68510 7 110772732 to 110772754 22 + TSS region transcription start site region 68510
Tssr68511 7 110772762 to 110772767 5 + TSS region transcription start site region 68511
Tssr68512 7 110772782 to 110772793 11 + TSS region transcription start site region 68512
Tssr68513 7 110772806 to 110772807 1 + TSS region transcription start site region 68513
Tssr68514 7 110772841 to 110772857 16 + TSS region transcription start site region 68514
Tssr74266 7 110773278 to 110773302 24 - TSS region transcription start site region 74266
Tssr68515 7 110773405 to 110773423 18 + TSS region transcription start site region 68515
Tssr68516 7 110773618 to 110773641 23 + TSS region transcription start site region 68516
Tssr68517 7 110773658 to 110773685 27 + TSS region transcription start site region 68517
Tssr68518 7 110773850 to 110773862 12 + TSS region transcription start site region 68518
Tssr68519 7 110773866 to 110773934 68 + TSS region transcription start site region 68519
Tssr68520 7 110774240 to 110774252 12 + TSS region transcription start site region 68520
Tssr68521 7 110777554 to 110777574 20 + TSS region transcription start site region 68521
Tssr68522 7 110777653 to 110777697 44 + TSS region transcription start site region 68522
Gm39069 7 110779268 to 110782800 3532 - lncRNA gene predicted gene, 39069
Tssr68523 7 110783493 to 110783496 3 + TSS region transcription start site region 68523
Tssr74267 7 110785129 to 110785135 6 - TSS region transcription start site region 74267
Ssial3 7 110792641 to 110792834 193 QTL susceptibility to sialadenitis 3
D7Mit53 7 110792641 to 110792834 193 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 53
Rnf141 7 110800432 to 110844457 44025 - protein coding gene ring finger protein 141
Gm47282 7 110802481 to 110802587 106 + miRNA gene predicted gene, 47282
Tssr68524 7 110803088 to 110803101 13 + TSS region transcription start site region 68524
Tssr68525 7 110806159 to 110806186 27 + TSS region transcription start site region 68525
Tssr68526 7 110808803 to 110808821 18 + TSS region transcription start site region 68526
Tssr68527 7 110808825 to 110808854 29 + TSS region transcription start site region 68527
Cpgi19580 7 110843898 to 110844569 671 CpG island CpG island 19580
Tssr74268 7 110844376 to 110844451 75 - TSS region transcription start site region 74268
Lyve1 7 110850607 to 110862953 12346 - protein coding gene lymphatic vessel endothelial hyaluronan receptor 1
Tssr74269 7 110851618 to 110851631 13 - TSS region transcription start site region 74269
Tssr2370 7 110859660 to 110859691 31 - TSS region transcription start site region 2370
Tssr74270 7 110862921 to 110862938 17 - TSS region transcription start site region 74270
Tssr74271 7 110862944 to 110862960 16 - TSS region transcription start site region 74271
Tssr74272 7 110862963 to 110862970 7 - TSS region transcription start site region 74272
Tssr2371 7 110863014 to 110863024 10 - TSS region transcription start site region 2371
Tssr74273 7 110863247 to 110863253 6 - TSS region transcription start site region 74273
Mrvi1 7 110868266 to 110982461 114195 - protein coding gene MRV integration site 1
Gm16336 7 110904985 to 110905851 866 + antisense lncRNA gene predicted gene 16336
Tssr74274 7 110926679 to 110926705 26 - TSS region transcription start site region 74274
Tssr68528 7 110951033 to 110951080 47 + TSS region transcription start site region 68528
Tssr68529 7 110955961 to 110955975 14 + TSS region transcription start site region 68529
Tssr74275 7 110956881 to 110956892 11 - TSS region transcription start site region 74275
Tssr74276 7 110982049 to 110982108 59 - TSS region transcription start site region 74276
Tssr74277 7 110982169 to 110982180 11 - TSS region transcription start site region 74277
Tssr74278 7 110982443 to 110982468 25 - TSS region transcription start site region 74278
Tssr74279 7 110982472 to 110982483 11 - TSS region transcription start site region 74279
Tssr74280 7 110990387 to 110990390 3 - TSS region transcription start site region 74280
Tssr68530 7 111025101 to 111025123 22 + TSS region transcription start site region 68530
Cpgi19581 7 111028637 to 111029468 831 CpG island CpG island 19581
Tssr68531 7 111028737 to 111028750 13 + TSS region transcription start site region 68531
Tssr68532 7 111028765 to 111028785 20 + TSS region transcription start site region 68532
Ctr9 7 111028951 to 111056377 27426 + protein coding gene CTR9 homolog, Paf1/RNA polymerase II complex component
Tssr68533 7 111028961 to 111028972 11 + TSS region transcription start site region 68533
Tssr68534 7 111028979 to 111029005 26 + TSS region transcription start site region 68534
Tssr68535 7 111029007 to 111029018 11 + TSS region transcription start site region 68535
Tssr68536 7 111029019 to 111029030 11 + TSS region transcription start site region 68536