Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:110144634-110784667

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19572 7 110164288 to 110165075 787 CpG island CpG island 19572
Tssr68492 7 110164315 to 110164321 6 + TSS region transcription start site region 68492
Tssr74253 7 110164868 to 110164875 7 - TSS region transcription start site region 74253
Tssr2367 7 110164881 to 110164926 45 - TSS region transcription start site region 2367
Tssr2368 7 110166226 to 110166259 33 - TSS region transcription start site region 2368
Tssr74254 7 110166352 to 110166363 11 - TSS region transcription start site region 74254
Cpgi19573 7 110221564 to 110222304 740 CpG island CpG island 19573
Tssr68493 7 110221697 to 110221708 11 + TSS region transcription start site region 68493
Swap70 7 110221711 to 110283506 61795 + protein coding gene SWA-70 protein
Tssr68494 7 110221724 to 110221739 15 + TSS region transcription start site region 68494
Tssr68495 7 110221742 to 110221766 24 + TSS region transcription start site region 68495
Tssr68496 7 110237739 to 110237741 2 + TSS region transcription start site region 68496
Tssr68497 7 110237878 to 110237881 3 + TSS region transcription start site region 68497
Tssr68498 7 110241605 to 110241609 4 + TSS region transcription start site region 68498
Tssr2369 7 110243570 to 110243574 4 + TSS region transcription start site region 2369
Gm45515 7 110277782 to 110281527 3745 - antisense lncRNA gene predicted gene 45515
Gm32861 7 110285502 to 110289142 3640 - lncRNA gene predicted gene, 32861
Tssr74255 7 110288228 to 110288236 8 - TSS region transcription start site region 74255
Tssr74256 7 110293463 to 110293467 4 - TSS region transcription start site region 74256
Gm9132 7 110302001 to 110302832 831 + pseudogene predicted gene 9132
D7Mit328 7 110302821 to 110302932 111 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 328
Sbf2 7 110308013 to 110614922 306909 - protein coding gene SET binding factor 2
Tssr74257 7 110372653 to 110372696 43 - TSS region transcription start site region 74257
Tssr74258 7 110372712 to 110372724 12 - TSS region transcription start site region 74258
Gm9064 7 110425070 to 110425602 532 + pseudogene predicted gene 9064
Tssr74259 7 110464634 to 110464667 33 - TSS region transcription start site region 74259
Gm17219 7 110522066 to 110522658 592 + pseudogene predicted gene 17219
Gm10087 7 110526792 to 110527121 329 + pseudogene predicted gene 10087
Gm46027 7 110598953 to 110602925 3972 - lncRNA gene predicted gene, 46027
Tssr74260 7 110611659 to 110611662 3 - TSS region transcription start site region 74260
Cpgi19574 7 110614042 to 110615520 1478 CpG island CpG island 19574
Tssr68499 7 110614331 to 110614351 20 + TSS region transcription start site region 68499
Tssr74261 7 110614888 to 110614928 40 - TSS region transcription start site region 74261
Cpgi19575 7 110626252 to 110626613 361 CpG island CpG island 19575
Gm28863 7 110626281 to 110639358 13077 - antisense lncRNA gene predicted gene 28863
Cpgi19576 7 110627486 to 110627790 304 CpG island CpG island 19576
Tssr68500 7 110627650 to 110627666 16 + TSS region transcription start site region 68500
Adm 7 110627669 to 110629819 2150 + protein coding gene adrenomedullin
Cpgi19577 7 110627935 to 110629272 1337 CpG island CpG island 19577
Tssr68501 7 110628534 to 110628545 11 + TSS region transcription start site region 68501
Tssr68502 7 110629526 to 110629531 5 + TSS region transcription start site region 68502
Cpgi19578 7 110630305 to 110630803 498 CpG island CpG island 19578
Tssr74262 7 110648729 to 110648738 9 - TSS region transcription start site region 74262
Tssr74263 7 110648766 to 110648784 18 - TSS region transcription start site region 74263
Tssr74264 7 110648817 to 110648833 16 - TSS region transcription start site region 74264
Gm21123 7 110690163 to 110699732 9569 - lincRNA gene predicted gene, 21123
Gm18907 7 110712972 to 110713492 520 - pseudogene predicted gene, 18907
Gm39068 7 110739661 to 110743500 3839 + lncRNA gene predicted gene, 39068
D7Mit369 7 110756413 to 110756537 124 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 369
B430319F04Rik 7 110766677 to 110769345 2668 - unclassified gene RIKEN cDNA B430319F04 gene
Tssr68503 7 110768063 to 110768100 37 + TSS region transcription start site region 68503
Cpgi19579 7 110768083 to 110769233 1150 CpG island CpG island 19579
Tssr68504 7 110768106 to 110768127 21 + TSS region transcription start site region 68504
Tssr68505 7 110768138 to 110768156 18 + TSS region transcription start site region 68505
Tssr68506 7 110768169 to 110768193 24 + TSS region transcription start site region 68506
Ampd3 7 110768206 to 110812405 44199 + protein coding gene adenosine monophosphate deaminase 3
Tssr68507 7 110768615 to 110768634 19 + TSS region transcription start site region 68507
Tssr68508 7 110768830 to 110768847 17 + TSS region transcription start site region 68508
Tssr74265 7 110769301 to 110769365 64 - TSS region transcription start site region 74265
Tssr68509 7 110770626 to 110770633 7 + TSS region transcription start site region 68509
Tssr68510 7 110772732 to 110772754 22 + TSS region transcription start site region 68510
Tssr68511 7 110772762 to 110772767 5 + TSS region transcription start site region 68511
Tssr68512 7 110772782 to 110772793 11 + TSS region transcription start site region 68512
Tssr68513 7 110772806 to 110772807 1 + TSS region transcription start site region 68513
Tssr68514 7 110772841 to 110772857 16 + TSS region transcription start site region 68514
Tssr74266 7 110773278 to 110773302 24 - TSS region transcription start site region 74266
Tssr68515 7 110773405 to 110773423 18 + TSS region transcription start site region 68515
Tssr68516 7 110773618 to 110773641 23 + TSS region transcription start site region 68516
Tssr68517 7 110773658 to 110773685 27 + TSS region transcription start site region 68517
Tssr68518 7 110773850 to 110773862 12 + TSS region transcription start site region 68518
Tssr68519 7 110773866 to 110773934 68 + TSS region transcription start site region 68519
Tssr68520 7 110774240 to 110774252 12 + TSS region transcription start site region 68520
Tssr68521 7 110777554 to 110777574 20 + TSS region transcription start site region 68521
Tssr68522 7 110777653 to 110777697 44 + TSS region transcription start site region 68522
Gm39069 7 110779268 to 110782800 3532 - lncRNA gene predicted gene, 39069
Tssr68523 7 110783493 to 110783496 3 + TSS region transcription start site region 68523