Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:110022653-110722696

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ipo7 7 110018274 to 110056609 38335 + protein coding gene importin 7
Tssr68480 7 110023109 to 110023119 10 + TSS region transcription start site region 68480
Gm25636 7 110023210 to 110023342 132 + snoRNA gene predicted gene, 25636
Tssr68481 7 110029746 to 110029761 15 + TSS region transcription start site region 68481
Tssr68482 7 110044120 to 110044125 5 + TSS region transcription start site region 68482
Tssr68483 7 110046349 to 110046354 5 + TSS region transcription start site region 68483
Snora23 7 110046364 to 110046547 183 + snoRNA gene small nucleolar RNA, H/ACA box 23
AA474408 7 110057987 to 110061325 3338 - unclassified gene expressed sequence AA474408
Tssr74242 7 110059677 to 110059734 57 - TSS region transcription start site region 74242
Tssr74243 7 110059738 to 110059749 11 - TSS region transcription start site region 74243
Tssr74244 7 110060804 to 110060819 15 - TSS region transcription start site region 74244
Cpgi19570 7 110060878 to 110062285 1407 CpG island CpG island 19570
Tssr74245 7 110061319 to 110061341 22 - TSS region transcription start site region 74245
Tssr74246 7 110061353 to 110061364 11 - TSS region transcription start site region 74246
Tssr74247 7 110061538 to 110061552 14 - TSS region transcription start site region 74247
Zfp143 7 110061670 to 110095396 33726 + protein coding gene zinc finger protein 143
Tssr68484 7 110061703 to 110061732 29 + TSS region transcription start site region 68484
Tssr68485 7 110061803 to 110061817 14 + TSS region transcription start site region 68485
Tssr68486 7 110062104 to 110062123 19 + TSS region transcription start site region 68486
D7Wsu130e 7 110118864 to 110120016 1152 unclassified gene DNA segment, Chr 7, Wayne State University 130, expressed
Gm45819 7 110119990 to 110121740 1750 + unclassified gene predicted gene 45819
Tssr74248 7 110120326 to 110120332 6 - TSS region transcription start site region 74248
Cpgi19571 7 110121423 to 110123392 1969 CpG island CpG island 19571
Tssr74249 7 110121579 to 110121593 14 - TSS region transcription start site region 74249
Tssr68487 7 110122033 to 110122135 102 + TSS region transcription start site region 68487
Wee1 7 110122046 to 110143286 21240 + protein coding gene WEE 1 homolog 1 (S. pombe)
Tssr68488 7 110122253 to 110122295 42 + TSS region transcription start site region 68488
Tssr68489 7 110122299 to 110122323 24 + TSS region transcription start site region 68489
Tssr68490 7 110122507 to 110122579 72 + TSS region transcription start site region 68490
Tssr68491 7 110122719 to 110122778 59 + TSS region transcription start site region 68491
Tssr74250 7 110122890 to 110122903 13 - TSS region transcription start site region 74250
Tssr74251 7 110122919 to 110122944 25 - TSS region transcription start site region 74251
Tssr74252 7 110123001 to 110123029 28 - TSS region transcription start site region 74252
Cpgi19572 7 110164288 to 110165075 787 CpG island CpG island 19572
Tssr68492 7 110164315 to 110164321 6 + TSS region transcription start site region 68492
Tssr74253 7 110164868 to 110164875 7 - TSS region transcription start site region 74253
Tssr2367 7 110164881 to 110164926 45 - TSS region transcription start site region 2367
Tssr2368 7 110166226 to 110166259 33 - TSS region transcription start site region 2368
Tssr74254 7 110166352 to 110166363 11 - TSS region transcription start site region 74254
Cpgi19573 7 110221564 to 110222304 740 CpG island CpG island 19573
Tssr68493 7 110221697 to 110221708 11 + TSS region transcription start site region 68493
Swap70 7 110221711 to 110283506 61795 + protein coding gene SWA-70 protein
Tssr68494 7 110221724 to 110221739 15 + TSS region transcription start site region 68494
Tssr68495 7 110221742 to 110221766 24 + TSS region transcription start site region 68495
Tssr68496 7 110237739 to 110237741 2 + TSS region transcription start site region 68496
Tssr68497 7 110237878 to 110237881 3 + TSS region transcription start site region 68497
Tssr68498 7 110241605 to 110241609 4 + TSS region transcription start site region 68498
Tssr2369 7 110243570 to 110243574 4 + TSS region transcription start site region 2369
Gm45515 7 110277782 to 110281527 3745 - antisense lncRNA gene predicted gene 45515
Gm32861 7 110285502 to 110289142 3640 - lncRNA gene predicted gene, 32861
Tssr74255 7 110288228 to 110288236 8 - TSS region transcription start site region 74255
Tssr74256 7 110293463 to 110293467 4 - TSS region transcription start site region 74256
Gm9132 7 110302001 to 110302832 831 + pseudogene predicted gene 9132
D7Mit328 7 110302821 to 110302932 111 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 328
Sbf2 7 110308013 to 110614922 306909 - protein coding gene SET binding factor 2
Tssr74257 7 110372653 to 110372696 43 - TSS region transcription start site region 74257
Tssr74258 7 110372712 to 110372724 12 - TSS region transcription start site region 74258
Gm9064 7 110425070 to 110425602 532 + pseudogene predicted gene 9064
Tssr74259 7 110464634 to 110464667 33 - TSS region transcription start site region 74259
Gm17219 7 110522066 to 110522658 592 + pseudogene predicted gene 17219
Gm10087 7 110526792 to 110527121 329 + pseudogene predicted gene 10087
Gm46027 7 110598953 to 110602925 3972 - lncRNA gene predicted gene, 46027
Tssr74260 7 110611659 to 110611662 3 - TSS region transcription start site region 74260
Cpgi19574 7 110614042 to 110615520 1478 CpG island CpG island 19574
Tssr68499 7 110614331 to 110614351 20 + TSS region transcription start site region 68499
Tssr74261 7 110614888 to 110614928 40 - TSS region transcription start site region 74261
Cpgi19575 7 110626252 to 110626613 361 CpG island CpG island 19575
Gm28863 7 110626281 to 110639358 13077 - antisense lncRNA gene predicted gene 28863
Cpgi19576 7 110627486 to 110627790 304 CpG island CpG island 19576
Tssr68500 7 110627650 to 110627666 16 + TSS region transcription start site region 68500
Adm 7 110627669 to 110629819 2150 + protein coding gene adrenomedullin
Cpgi19577 7 110627935 to 110629272 1337 CpG island CpG island 19577
Tssr68501 7 110628534 to 110628545 11 + TSS region transcription start site region 68501
Tssr68502 7 110629526 to 110629531 5 + TSS region transcription start site region 68502
Cpgi19578 7 110630305 to 110630803 498 CpG island CpG island 19578
Tssr74262 7 110648729 to 110648738 9 - TSS region transcription start site region 74262
Tssr74263 7 110648766 to 110648784 18 - TSS region transcription start site region 74263
Tssr74264 7 110648817 to 110648833 16 - TSS region transcription start site region 74264
Gm21123 7 110690163 to 110699732 9569 - lincRNA gene predicted gene, 21123
Gm18907 7 110712972 to 110713492 520 - pseudogene predicted gene, 18907