Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:109918254-110118267

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dennd5a 7 109893780 to 109960470 66690 - protein coding gene DENN/MADD domain containing 5A
Tssr74229 7 109927337 to 109927340 3 - TSS region transcription start site region 74229
Tssr68475 7 109958274 to 109958279 5 + TSS region transcription start site region 68475
Cpgi19566 7 109959609 to 109960843 1234 CpG island CpG island 19566
Tssr74230 7 109960121 to 109960128 7 - TSS region transcription start site region 74230
Tssr74231 7 109960207 to 109960218 11 - TSS region transcription start site region 74231
Tssr74232 7 109960385 to 109960433 48 - TSS region transcription start site region 74232
Tssr74233 7 109960461 to 109960477 16 - TSS region transcription start site region 74233
Tssr74234 7 109960497 to 109960504 7 - TSS region transcription start site region 74234
Tmem41b 7 109972187 to 109986230 14043 - protein coding gene transmembrane protein 41B
Cpgi19567 7 109985683 to 109986591 908 CpG island CpG island 19567
Tssr74235 7 109986181 to 109986193 12 - TSS region transcription start site region 74235
Tssr74236 7 109986216 to 109986237 21 - TSS region transcription start site region 74236
Tssr74237 7 109986250 to 109986306 56 - TSS region transcription start site region 74237
Tssr74238 7 109986309 to 109986346 37 - TSS region transcription start site region 74238
Tssr74239 7 109986445 to 109986480 35 - TSS region transcription start site region 74239
Gm24842 7 109988078 to 109988131 53 + snRNA gene predicted gene, 24842
Tssr74240 7 109991429 to 109991441 12 - TSS region transcription start site region 74240
1600010M07Rik 7 109998377 to 110006646 8269 - antisense lncRNA gene RIKEN cDNA 1600010M07 gene
Cpgi19568 7 110003102 to 110003412 310 CpG island CpG island 19568
Tssr68476 7 110003574 to 110003576 2 + TSS region transcription start site region 68476
Gm23100 7 110003578 to 110003718 140 + snRNA gene predicted gene, 23100
Tssr74241 7 110006608 to 110006651 43 - TSS region transcription start site region 74241
Cpgi19569 7 110018115 to 110019140 1025 CpG island CpG island 19569
Tssr68477 7 110018254 to 110018267 13 + TSS region transcription start site region 68477
Ipo7 7 110018274 to 110056609 38335 + protein coding gene importin 7
Tssr68478 7 110018296 to 110018300 4 + TSS region transcription start site region 68478
Tssr68479 7 110018301 to 110018326 25 + TSS region transcription start site region 68479
Tssr68480 7 110023109 to 110023119 10 + TSS region transcription start site region 68480
Gm25636 7 110023210 to 110023342 132 + snoRNA gene predicted gene, 25636
Tssr68481 7 110029746 to 110029761 15 + TSS region transcription start site region 68481
Tssr68482 7 110044120 to 110044125 5 + TSS region transcription start site region 68482
Tssr68483 7 110046349 to 110046354 5 + TSS region transcription start site region 68483
Snora23 7 110046364 to 110046547 183 + snoRNA gene small nucleolar RNA, H/ACA box 23
AA474408 7 110057987 to 110061325 3338 - unclassified gene expressed sequence AA474408
Tssr74242 7 110059677 to 110059734 57 - TSS region transcription start site region 74242
Tssr74243 7 110059738 to 110059749 11 - TSS region transcription start site region 74243
Tssr74244 7 110060804 to 110060819 15 - TSS region transcription start site region 74244
Cpgi19570 7 110060878 to 110062285 1407 CpG island CpG island 19570
Tssr74245 7 110061319 to 110061341 22 - TSS region transcription start site region 74245
Tssr74246 7 110061353 to 110061364 11 - TSS region transcription start site region 74246
Tssr74247 7 110061538 to 110061552 14 - TSS region transcription start site region 74247
Zfp143 7 110061670 to 110095396 33726 + protein coding gene zinc finger protein 143
Tssr68484 7 110061703 to 110061732 29 + TSS region transcription start site region 68484
Tssr68485 7 110061803 to 110061817 14 + TSS region transcription start site region 68485
Tssr68486 7 110062104 to 110062123 19 + TSS region transcription start site region 68486