Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:109672193-109832208

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St5 7 109523911 to 109703605 179694 - protein coding gene suppression of tumorigenicity 5
Tssr74210 7 109672229 to 109672248 19 - TSS region transcription start site region 74210
Gm44864 7 109699525 to 109703608 4083 + antisense lncRNA gene predicted gene 44864
Cpgi19561 7 109703222 to 109704316 1094 CpG island CpG island 19561
Tssr74211 7 109703563 to 109703574 11 - TSS region transcription start site region 74211
Tssr74212 7 109703582 to 109703621 39 - TSS region transcription start site region 74212
Tssr68473 7 109703672 to 109703759 87 + TSS region transcription start site region 68473
Akip1 7 109703690 to 109712189 8499 + protein coding gene A kinase (PRKA) interacting protein 1
BC051019 7 109712181 to 109723850 11669 - protein coding gene cDNA sequence BC051019
Tssr74213 7 109723844 to 109723855 11 - TSS region transcription start site region 74213
Tssr74214 7 109723860 to 109723889 29 - TSS region transcription start site region 74214
Ascl3 7 109727465 to 109731726 4261 - protein coding gene achaete-scute family bHLH transcription factor 3
Cpgi19562 7 109727696 to 109728014 318 CpG island CpG island 19562
Tssr74215 7 109731708 to 109731715 7 - TSS region transcription start site region 74215
Tmem9b 7 109735836 to 109752263 16427 - protein coding gene TMEM9 domain family, member B
Cpgi19563 7 109751840 to 109752815 975 CpG island CpG island 19563
Tssr74216 7 109752193 to 109752208 15 - TSS region transcription start site region 74216
Tssr74217 7 109752210 to 109752290 80 - TSS region transcription start site region 74217
Tssr68474 7 109752307 to 109752342 35 + TSS region transcription start site region 68474
4930431P19Rik 7 109752320 to 109755278 2958 + pseudogene RIKEN cDNA 4930431P19 gene
Nrip3 7 109758056 to 109781545 23489 - protein coding gene nuclear receptor interacting protein 3
Tssr74218 7 109759341 to 109759348 7 - TSS region transcription start site region 74218
Tssr74219 7 109760208 to 109760213 5 - TSS region transcription start site region 74219
D7Mill13 7 109761607 to 109761831 224 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 13
Gm22822 7 109774612 to 109774718 106 - snRNA gene predicted gene, 22822
Cpgi19564 7 109781085 to 109782176 1091 CpG island CpG island 19564
Tssr74220 7 109781538 to 109781554 16 - TSS region transcription start site region 74220
D7Mit130 7 109788134 to 109788282 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 130
Tssr2366 7 109798672 to 109798678 6 + TSS region transcription start site region 2366
Scube2 7 109798690 to 109865679 66989 - protein coding gene signal peptide, CUB domain, EGF-like 2
Tssr74221 7 109807955 to 109807962 7 - TSS region transcription start site region 74221
Tssr74222 7 109807979 to 109807998 19 - TSS region transcription start site region 74222
Tssr74223 7 109808240 to 109808251 11 - TSS region transcription start site region 74223