Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:109613240-110003251

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St5 7 109523911 to 109703605 179694 - protein coding gene suppression of tumorigenicity 5
Tssr74197 7 109616332 to 109616345 13 - TSS region transcription start site region 74197
Tssr74198 7 109616350 to 109616374 24 - TSS region transcription start site region 74198
Tssr74199 7 109616404 to 109616487 83 - TSS region transcription start site region 74199
Tssr74200 7 109616548 to 109616616 68 - TSS region transcription start site region 74200
Tssr74201 7 109616795 to 109616819 24 - TSS region transcription start site region 74201
Tssr74202 7 109628021 to 109628025 4 - TSS region transcription start site region 74202
D7Mill10 7 109630865 to 109631071 206 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 10
Tssr74203 7 109637379 to 109637407 28 - TSS region transcription start site region 74203
Tssr74204 7 109637422 to 109637436 14 - TSS region transcription start site region 74204
Tssr74205 7 109637494 to 109637510 16 - TSS region transcription start site region 74205
Tssr74206 7 109637606 to 109637620 14 - TSS region transcription start site region 74206
Tssr74207 7 109665696 to 109665699 3 - TSS region transcription start site region 74207
Cpgi19560 7 109671514 to 109672050 536 CpG island CpG island 19560
Tssr74208 7 109671940 to 109671961 21 - TSS region transcription start site region 74208
Tssr74209 7 109671964 to 109671992 28 - TSS region transcription start site region 74209
Tssr74210 7 109672229 to 109672248 19 - TSS region transcription start site region 74210
Gm44864 7 109699525 to 109703608 4083 + antisense lncRNA gene predicted gene 44864
Cpgi19561 7 109703222 to 109704316 1094 CpG island CpG island 19561
Tssr74211 7 109703563 to 109703574 11 - TSS region transcription start site region 74211
Tssr74212 7 109703582 to 109703621 39 - TSS region transcription start site region 74212
Tssr68473 7 109703672 to 109703759 87 + TSS region transcription start site region 68473
Akip1 7 109703690 to 109712189 8499 + protein coding gene A kinase (PRKA) interacting protein 1
BC051019 7 109712181 to 109723850 11669 - protein coding gene cDNA sequence BC051019
Tssr74213 7 109723844 to 109723855 11 - TSS region transcription start site region 74213
Tssr74214 7 109723860 to 109723889 29 - TSS region transcription start site region 74214
Ascl3 7 109727465 to 109731726 4261 - protein coding gene achaete-scute family bHLH transcription factor 3
Cpgi19562 7 109727696 to 109728014 318 CpG island CpG island 19562
Tssr74215 7 109731708 to 109731715 7 - TSS region transcription start site region 74215
Tmem9b 7 109735836 to 109752263 16427 - protein coding gene TMEM9 domain family, member B
Cpgi19563 7 109751840 to 109752815 975 CpG island CpG island 19563
Tssr74216 7 109752193 to 109752208 15 - TSS region transcription start site region 74216
Tssr74217 7 109752210 to 109752290 80 - TSS region transcription start site region 74217
Tssr68474 7 109752307 to 109752342 35 + TSS region transcription start site region 68474
4930431P19Rik 7 109752320 to 109755278 2958 + pseudogene RIKEN cDNA 4930431P19 gene
Nrip3 7 109758056 to 109781545 23489 - protein coding gene nuclear receptor interacting protein 3
Tssr74218 7 109759341 to 109759348 7 - TSS region transcription start site region 74218
Tssr74219 7 109760208 to 109760213 5 - TSS region transcription start site region 74219
D7Mill13 7 109761607 to 109761831 224 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 13
Gm22822 7 109774612 to 109774718 106 - snRNA gene predicted gene, 22822
Cpgi19564 7 109781085 to 109782176 1091 CpG island CpG island 19564
Tssr74220 7 109781538 to 109781554 16 - TSS region transcription start site region 74220
D7Mit130 7 109788134 to 109788282 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 130
Tssr2366 7 109798672 to 109798678 6 + TSS region transcription start site region 2366
Scube2 7 109798690 to 109865679 66989 - protein coding gene signal peptide, CUB domain, EGF-like 2
Tssr74221 7 109807955 to 109807962 7 - TSS region transcription start site region 74221
Tssr74222 7 109807979 to 109807998 19 - TSS region transcription start site region 74222
Tssr74223 7 109808240 to 109808251 11 - TSS region transcription start site region 74223
Tssr74224 7 109840888 to 109840896 8 - TSS region transcription start site region 74224
Tssr74225 7 109840904 to 109840907 3 - TSS region transcription start site region 74225
Tssr74226 7 109840912 to 109840922 10 - TSS region transcription start site region 74226
Cpgi19565 7 109865094 to 109866117 1023 CpG island CpG island 19565
Tssr74227 7 109865637 to 109865652 15 - TSS region transcription start site region 74227
D7Ertd344e 7 109893026 to 109893245 219 DNA segment DNA segment, Chr 7, ERATO Doi 344, expressed
Dennd5a 7 109893780 to 109960470 66690 - protein coding gene DENN/MADD domain containing 5A
Tssr74228 7 109894010 to 109894027 17 - TSS region transcription start site region 74228
Tssr74229 7 109927337 to 109927340 3 - TSS region transcription start site region 74229
Tssr68475 7 109958274 to 109958279 5 + TSS region transcription start site region 68475
Cpgi19566 7 109959609 to 109960843 1234 CpG island CpG island 19566
Tssr74230 7 109960121 to 109960128 7 - TSS region transcription start site region 74230
Tssr74231 7 109960207 to 109960218 11 - TSS region transcription start site region 74231
Tssr74232 7 109960385 to 109960433 48 - TSS region transcription start site region 74232
Tssr74233 7 109960461 to 109960477 16 - TSS region transcription start site region 74233
Tssr74234 7 109960497 to 109960504 7 - TSS region transcription start site region 74234
Tmem41b 7 109972187 to 109986230 14043 - protein coding gene transmembrane protein 41B
Cpgi19567 7 109985683 to 109986591 908 CpG island CpG island 19567
Tssr74235 7 109986181 to 109986193 12 - TSS region transcription start site region 74235
Tssr74236 7 109986216 to 109986237 21 - TSS region transcription start site region 74236
Tssr74237 7 109986250 to 109986306 56 - TSS region transcription start site region 74237
Tssr74238 7 109986309 to 109986346 37 - TSS region transcription start site region 74238
Tssr74239 7 109986445 to 109986480 35 - TSS region transcription start site region 74239
Gm24842 7 109988078 to 109988131 53 + snRNA gene predicted gene, 24842
Tssr74240 7 109991429 to 109991441 12 - TSS region transcription start site region 74240
1600010M07Rik 7 109998377 to 110006646 8269 - antisense lncRNA gene RIKEN cDNA 1600010M07 gene
Cpgi19568 7 110003102 to 110003412 310 CpG island CpG island 19568