Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:109515865-109746071

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr74184 7 109516686 to 109516723 37 - TSS region transcription start site region 74184
Cpgi19559 7 109518696 to 109519911 1215 CpG island CpG island 19559
Tssr74185 7 109518965 to 109519027 62 - TSS region transcription start site region 74185
Tssr68470 7 109519139 to 109519242 103 + TSS region transcription start site region 68470
Rpl27a 7 109519195 to 109522369 3174 + protein coding gene ribosomal protein L27A
Snora3 7 109520132 to 109520251 119 + snoRNA gene small nucleolar RNA, H/ACA box 3
Tssr68471 7 109521087 to 109521090 3 + TSS region transcription start site region 68471
Gm47284 7 109521249 to 109521368 119 + miRNA gene predicted gene, 47284
Gm24888 7 109521280 to 109521409 129 + snoRNA gene predicted gene, 24888
St5 7 109523911 to 109703605 179694 - protein coding gene suppression of tumorigenicity 5
Tssr74186 7 109524181 to 109524201 20 - TSS region transcription start site region 74186
Tssr74187 7 109525706 to 109525715 9 - TSS region transcription start site region 74187
Tssr74188 7 109525742 to 109525757 15 - TSS region transcription start site region 74188
Tssr74189 7 109534857 to 109534868 11 - TSS region transcription start site region 74189
Tssr74190 7 109545280 to 109545299 19 - TSS region transcription start site region 74190
D7Mill9 7 109547507 to 109547741 234 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 9
Tssr74191 7 109557467 to 109557468 1 - TSS region transcription start site region 74191
Tssr74192 7 109600782 to 109600784 2 - TSS region transcription start site region 74192
Tssr74193 7 109602625 to 109602637 12 - TSS region transcription start site region 74193
Tssr74194 7 109602652 to 109602709 57 - TSS region transcription start site region 74194
Tssr74195 7 109602742 to 109602747 5 - TSS region transcription start site region 74195
Tssr74196 7 109609225 to 109609229 4 - TSS region transcription start site region 74196
Tssr68472 7 109610263 to 109610302 39 + TSS region transcription start site region 68472
Tssr74197 7 109616332 to 109616345 13 - TSS region transcription start site region 74197
Tssr74198 7 109616350 to 109616374 24 - TSS region transcription start site region 74198
Tssr74199 7 109616404 to 109616487 83 - TSS region transcription start site region 74199
Tssr74200 7 109616548 to 109616616 68 - TSS region transcription start site region 74200
Tssr74201 7 109616795 to 109616819 24 - TSS region transcription start site region 74201
Tssr74202 7 109628021 to 109628025 4 - TSS region transcription start site region 74202
D7Mill10 7 109630865 to 109631071 206 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 10
Tssr74203 7 109637379 to 109637407 28 - TSS region transcription start site region 74203
Tssr74204 7 109637422 to 109637436 14 - TSS region transcription start site region 74204
Tssr74205 7 109637494 to 109637510 16 - TSS region transcription start site region 74205
Tssr74206 7 109637606 to 109637620 14 - TSS region transcription start site region 74206
Tssr74207 7 109665696 to 109665699 3 - TSS region transcription start site region 74207
Cpgi19560 7 109671514 to 109672050 536 CpG island CpG island 19560
Tssr74208 7 109671940 to 109671961 21 - TSS region transcription start site region 74208
Tssr74209 7 109671964 to 109671992 28 - TSS region transcription start site region 74209
Tssr74210 7 109672229 to 109672248 19 - TSS region transcription start site region 74210
Gm44864 7 109699525 to 109703608 4083 + antisense lncRNA gene predicted gene 44864
Cpgi19561 7 109703222 to 109704316 1094 CpG island CpG island 19561
Tssr74211 7 109703563 to 109703574 11 - TSS region transcription start site region 74211
Tssr74212 7 109703582 to 109703621 39 - TSS region transcription start site region 74212
Tssr68473 7 109703672 to 109703759 87 + TSS region transcription start site region 68473
Akip1 7 109703690 to 109712189 8499 + protein coding gene A kinase (PRKA) interacting protein 1
BC051019 7 109712181 to 109723850 11669 - protein coding gene cDNA sequence BC051019
Tssr74213 7 109723844 to 109723855 11 - TSS region transcription start site region 74213
Tssr74214 7 109723860 to 109723889 29 - TSS region transcription start site region 74214
Ascl3 7 109727465 to 109731726 4261 - protein coding gene achaete-scute family bHLH transcription factor 3
Cpgi19562 7 109727696 to 109728014 318 CpG island CpG island 19562
Tssr74215 7 109731708 to 109731715 7 - TSS region transcription start site region 74215
Tmem9b 7 109735836 to 109752263 16427 - protein coding gene TMEM9 domain family, member B