Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:108771458-109381585

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45232 7 108795003 to 108795164 161 + pseudogene predicted gene 45232
Tssr68455 7 108804485 to 108804489 4 + TSS region transcription start site region 68455
Olfr514 7 108825065 to 108825997 932 - protein coding gene olfactory receptor 514
Olfr515-ps1 7 108843304 to 108843492 188 - pseudogene olfactory receptor 515, pseudogene 1
Olfr516 7 108845064 to 108846008 944 - protein coding gene olfactory receptor 516
Gm17992 7 108865424 to 108866495 1071 + pseudogene predicted gene, 17992
Olfr517 7 108868208 to 108869152 944 - protein coding gene olfactory receptor 517
Olfr518 7 108880603 to 108881604 1001 - protein coding gene olfactory receptor 518
Nba3 7 108883789 to 108883949 160 QTL New Zealand Black autoimmunity 3
Skull10 7 108883789 to 108883949 160 QTL skull morphology 10
D7Mit17 7 108883789 to 108883949 160 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 17
Lskcn2 7 108883789 to 119094307 10210518 QTL LSK cell number 2
Olfr519 7 108893461 to 108894405 944 - protein coding gene olfactory receptor 519
Nlrp10 7 108921853 to 108930158 8305 - protein coding gene NLR family, pyrin domain containing 10
Tssr74167 7 108924391 to 108924395 4 - TSS region transcription start site region 74167
Tssr74168 7 108930151 to 108930164 13 - TSS region transcription start site region 74168
Tssr74169 7 108930168 to 108930183 15 - TSS region transcription start site region 74169
D7Mit127 7 108932735 to 108932934 199 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 127
Cpgi19551 7 108934266 to 108934909 643 CpG island CpG island 19551
Tssr68456 7 108934405 to 108934430 25 + TSS region transcription start site region 68456
Eif3f 7 108934415 to 108941942 7527 + protein coding gene eukaryotic translation initiation factor 3, subunit F
Tssr68457 7 108934517 to 108934528 11 + TSS region transcription start site region 68457
Tssr68458 7 108938036 to 108938063 27 + TSS region transcription start site region 68458
Tssr68459 7 108938067 to 108938091 24 + TSS region transcription start site region 68459
Tssr68460 7 108938469 to 108938488 19 + TSS region transcription start site region 68460
Cpgi19552 7 108950177 to 108951474 1297 CpG island CpG island 19552
Tssr68461 7 108950472 to 108950485 13 + TSS region transcription start site region 68461
Tssr68462 7 108950628 to 108950679 51 + TSS region transcription start site region 68462
BC049265 7 108950656 to 108961534 10878 unclassified gene cDNA sequence BC049265
Tssr68463 7 108950697 to 108950703 6 + TSS region transcription start site region 68463
Gm26599 7 108950754 to 108961535 10781 - lincRNA gene predicted gene, 26599
Gm39067 7 108954159 to 108955256 1097 - lncRNA gene predicted gene, 39067
Gm32309 7 108969683 to 108992084 22401 - lncRNA gene predicted gene, 32309
Cpgi19553 7 109010463 to 109011592 1129 CpG island CpG island 19553
Tssr2363 7 109010827 to 109010835 8 + TSS region transcription start site region 2363
Tssr68464 7 109010842 to 109010845 3 + TSS region transcription start site region 68464
Tssr68465 7 109010850 to 109010930 80 + TSS region transcription start site region 68465
Tub 7 109010880 to 109034459 23579 + protein coding gene tubby bipartite transcription factor
Ric3 7 109034312 to 109083331 49019 - protein coding gene RIC3 acetylcholine receptor chaperone
Gm25450 7 109076136 to 109076242 106 - snRNA gene predicted gene, 25450
D7Mill3 7 109076458 to 109076585 127 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 3
Cpgi19554 7 109082946 to 109083580 634 CpG island CpG island 19554
Tssr74170 7 109083284 to 109083337 53 - TSS region transcription start site region 74170
D7Mit219 7 109096065 to 109096188 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 219
Lmo1 7 109138572 to 109175207 36635 - protein coding gene LIM domain only 1
Gm44781 7 109142887 to 109146604 3717 + antisense lncRNA gene predicted gene 44781
D7Mill4 7 109165463 to 109165710 247 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 4
Cpgi19555 7 109169254 to 109170224 970 CpG island CpG island 19555
Tssr74171 7 109170044 to 109170064 20 - TSS region transcription start site region 74171
Tssr74172 7 109170529 to 109170557 28 - TSS region transcription start site region 74172
Cpgi19556 7 109174430 to 109175972 1542 CpG island CpG island 19556
Tssr74173 7 109175115 to 109175126 11 - TSS region transcription start site region 74173
Tssr74174 7 109175130 to 109175171 41 - TSS region transcription start site region 74174
Tssr74175 7 109175313 to 109175356 43 - TSS region transcription start site region 74175
Tssr74176 7 109175358 to 109175369 11 - TSS region transcription start site region 74176
D7Mit325 7 109200103 to 109200202 99 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 325
Gm45024 7 109208301 to 109224200 15899 - lincRNA gene predicted gene 45024
D7Mit280 7 109230147 to 109230254 107 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 280
Cpgi19557 7 109241343 to 109241552 209 CpG island CpG island 19557
Gm32563 7 109252932 to 109256986 4054 + lncRNA gene predicted gene, 32563
Stk33 7 109279223 to 109439081 159858 - protein coding gene serine/threonine kinase 33
D7Mill5 7 109284527 to 109284719 192 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 5
D7Mill6 7 109289616 to 109289776 160 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 6
D7Mit63 7 109345223 to 109345370 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 63
D7Mit236 7 109346720 to 109346849 129 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 236