Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:107280728-107638656

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Platr28 7 107243022 to 107300396 57374 + lincRNA gene pluripotency associated transcript 28
Gm24932 7 107319654 to 107319763 109 - miRNA gene predicted gene, 24932
Gm19033 7 107366072 to 107367035 963 + pseudogene predicted gene, 19033
D7Mit262 7 107369820 to 107369927 107 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 262
Cpgi19548 7 107370176 to 107371788 1612 CpG island CpG island 19548
Tssr68413 7 107370712 to 107370730 18 + TSS region transcription start site region 68413
Syt9 7 107370728 to 107548656 177928 + protein coding gene synaptotagmin IX
Tssr68414 7 107370745 to 107370848 103 + TSS region transcription start site region 68414
Tssr68415 7 107422666 to 107422670 4 + TSS region transcription start site region 68415
D7Mit324 7 107509644 to 107509736 92 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 324
A930026C06Rik 7 107517531 to 107519548 2017 unclassified gene RIKEN cDNA A930026C06 gene
Tssr68416 7 107567424 to 107567440 16 + TSS region transcription start site region 68416
Tssr68417 7 107567445 to 107567461 16 + TSS region transcription start site region 68417
Olfml1 7 107567446 to 107591094 23648 + protein coding gene olfactomedin-like 1
Tssr68418 7 107567647 to 107567708 61 + TSS region transcription start site region 68418
Tssr68419 7 107567718 to 107567746 28 + TSS region transcription start site region 68419
Gm44773 7 107592950 to 107593506 556 + lincRNA gene predicted gene 44773
Tssr68420 7 107594105 to 107594130 25 + TSS region transcription start site region 68420
Cpgi19549 7 107594608 to 107595669 1061 CpG island CpG island 19549
Tssr68421 7 107595032 to 107595060 28 + TSS region transcription start site region 68421
Tssr68422 7 107595068 to 107595085 17 + TSS region transcription start site region 68422
Tssr68423 7 107595184 to 107595233 49 + TSS region transcription start site region 68423
Ppfibp2 7 107595207 to 107748583 153376 + protein coding gene PTPRF interacting protein, binding protein 2 (liprin beta 2)
Tssr68424 7 107595239 to 107595263 24 + TSS region transcription start site region 68424
Tssr68425 7 107604027 to 107604039 12 + TSS region transcription start site region 68425
Gm44772 7 107623971 to 107625161 1190 + unclassified gene predicted gene 44772
5330417H12Rik 7 107623971 to 107625161 1190 - unclassified gene RIKEN cDNA 5330417H12 gene