Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:107170728-107748656

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stmm1 7 100505707 to 107683208 7177501 QTL skin tumor modifier of MSM 1
Nlrp14 7 107166990 to 107198102 31112 + protein coding gene NLR family, pyrin domain containing 14
Tssr68405 7 107187093 to 107187146 53 + TSS region transcription start site region 68405
Tssr68406 7 107187166 to 107187171 5 + TSS region transcription start site region 68406
Gm3765 7 107198743 to 107200189 1446 - pseudogene predicted gene 3765
4930513L20Rik 7 107204547 to 107205864 1317 unclassified gene RIKEN cDNA 4930513L20 gene
Tssr68407 7 107209167 to 107209177 10 + TSS region transcription start site region 68407
Tssr68408 7 107209182 to 107209199 17 + TSS region transcription start site region 68408
Cpgi19547 7 107209208 to 107210736 1528 CpG island CpG island 19547
Tssr74161 7 107209242 to 107209253 11 - TSS region transcription start site region 74161
Tssr68409 7 107209377 to 107209383 6 + TSS region transcription start site region 68409
Tssr68410 7 107209384 to 107209404 20 + TSS region transcription start site region 68410
Tssr68411 7 107209439 to 107209451 12 + TSS region transcription start site region 68411
Rbmxl2 7 107209445 to 107210916 1471 + protein coding gene RNA binding motif protein, X-linked-like 2
Tssr68412 7 107209468 to 107209484 16 + TSS region transcription start site region 68412
Platr28 7 107243022 to 107300396 57374 + lincRNA gene pluripotency associated transcript 28
Gm24932 7 107319654 to 107319763 109 - miRNA gene predicted gene, 24932
Gm19033 7 107366072 to 107367035 963 + pseudogene predicted gene, 19033
D7Mit262 7 107369820 to 107369927 107 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 262
Cpgi19548 7 107370176 to 107371788 1612 CpG island CpG island 19548
Tssr68413 7 107370712 to 107370730 18 + TSS region transcription start site region 68413
Syt9 7 107370728 to 107548656 177928 + protein coding gene synaptotagmin IX
Tssr68414 7 107370745 to 107370848 103 + TSS region transcription start site region 68414
Tssr68415 7 107422666 to 107422670 4 + TSS region transcription start site region 68415
D7Mit324 7 107509644 to 107509736 92 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 324
A930026C06Rik 7 107517531 to 107519548 2017 unclassified gene RIKEN cDNA A930026C06 gene
Tssr68416 7 107567424 to 107567440 16 + TSS region transcription start site region 68416
Tssr68417 7 107567445 to 107567461 16 + TSS region transcription start site region 68417
Olfml1 7 107567446 to 107591094 23648 + protein coding gene olfactomedin-like 1
Tssr68418 7 107567647 to 107567708 61 + TSS region transcription start site region 68418
Tssr68419 7 107567718 to 107567746 28 + TSS region transcription start site region 68419
Gm44773 7 107592950 to 107593506 556 + lincRNA gene predicted gene 44773
Tssr68420 7 107594105 to 107594130 25 + TSS region transcription start site region 68420
Cpgi19549 7 107594608 to 107595669 1061 CpG island CpG island 19549
Tssr68421 7 107595032 to 107595060 28 + TSS region transcription start site region 68421
Tssr68422 7 107595068 to 107595085 17 + TSS region transcription start site region 68422
Tssr68423 7 107595184 to 107595233 49 + TSS region transcription start site region 68423
Ppfibp2 7 107595207 to 107748583 153376 + protein coding gene PTPRF interacting protein, binding protein 2 (liprin beta 2)
Tssr68424 7 107595239 to 107595263 24 + TSS region transcription start site region 68424
Tssr68425 7 107604027 to 107604039 12 + TSS region transcription start site region 68425
Gm44772 7 107623971 to 107625161 1190 + unclassified gene predicted gene 44772
5330417H12Rik 7 107623971 to 107625161 1190 - unclassified gene RIKEN cDNA 5330417H12 gene
Tssr68426 7 107639112 to 107639129 17 + TSS region transcription start site region 68426
Tssr68427 7 107639156 to 107639191 35 + TSS region transcription start site region 68427
Tssr68428 7 107653055 to 107653072 17 + TSS region transcription start site region 68428
D7Mit129 7 107661088 to 107661193 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 129
Tssr68429 7 107661893 to 107661901 8 + TSS region transcription start site region 68429
Tssr68430 7 107664678 to 107664693 15 + TSS region transcription start site region 68430
Tssr68431 7 107664767 to 107664781 14 + TSS region transcription start site region 68431
Tssr68432 7 107664784 to 107664794 10 + TSS region transcription start site region 68432
Tssr68433 7 107664909 to 107664927 18 + TSS region transcription start site region 68433
Tssr68434 7 107664932 to 107664992 60 + TSS region transcription start site region 68434
Tssr68435 7 107665001 to 107665015 14 + TSS region transcription start site region 68435
Tssr2361 7 107665364 to 107665381 17 + TSS region transcription start site region 2361
Tssr68436 7 107665585 to 107665606 21 + TSS region transcription start site region 68436
Tssr68437 7 107665680 to 107665720 40 + TSS region transcription start site region 68437
Tssr68438 7 107665819 to 107665870 51 + TSS region transcription start site region 68438
Tssr68439 7 107666186 to 107666204 18 + TSS region transcription start site region 68439
Tssr68440 7 107670345 to 107670351 6 + TSS region transcription start site region 68440
Tssr68441 7 107681679 to 107681691 12 + TSS region transcription start site region 68441
D7Mit124 7 107683097 to 107683208 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 124
Tssr68442 7 107684993 to 107684998 5 + TSS region transcription start site region 68442
Tssr68443 7 107685482 to 107685548 66 + TSS region transcription start site region 68443
Tssr68444 7 107685562 to 107685575 13 + TSS region transcription start site region 68444
Tssr68445 7 107691840 to 107691859 19 + TSS region transcription start site region 68445
Tssr68446 7 107693136 to 107693149 13 + TSS region transcription start site region 68446
Tssr68447 7 107693156 to 107693167 11 + TSS region transcription start site region 68447
Tssr68448 7 107693218 to 107693244 26 + TSS region transcription start site region 68448
Tssr68449 7 107693268 to 107693278 10 + TSS region transcription start site region 68449
Tssr68450 7 107693284 to 107693291 7 + TSS region transcription start site region 68450
Tssr68451 7 107693881 to 107693893 12 + TSS region transcription start site region 68451
Tssr68452 7 107708978 to 107708986 8 + TSS region transcription start site region 68452
4933409K08Rik 7 107719730 to 107724402 4672 unclassified gene RIKEN cDNA 4933409K08 gene
Tssr68453 7 107722909 to 107722928 19 + TSS region transcription start site region 68453
Cyb5r2 7 107748455 to 107758032 9577 - protein coding gene cytochrome b5 reductase 2