Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:105712950-109473506

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396 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stmm1 7 100505707 to 107683208 7177501 QTL skin tumor modifier of MSM 1
Dnhd1 7 105650827 to 105721799 70972 + protein coding gene dynein heavy chain domain 1
Rrp8 7 105731730 to 105737385 5655 - protein coding gene ribosomal RNA processing 8, methyltransferase, homolog (yeast)
Cpgi19542 7 105736100 to 105737398 1298 CpG island CpG island 19542
Tssr74084 7 105736390 to 105736404 14 - TSS region transcription start site region 74084
Tssr74085 7 105736426 to 105736441 15 - TSS region transcription start site region 74085
Tssr74086 7 105736447 to 105736488 41 - TSS region transcription start site region 74086
Tssr74087 7 105736490 to 105736534 44 - TSS region transcription start site region 74087
Tssr68392 7 105736565 to 105736589 24 + TSS region transcription start site region 68392
Ilk 7 105736592 to 105742925 6333 + protein coding gene integrin linked kinase
Tssr68393 7 105736644 to 105736698 54 + TSS region transcription start site region 68393
Tssr68394 7 105736702 to 105736735 33 + TSS region transcription start site region 68394
Tssr68395 7 105736746 to 105736764 18 + TSS region transcription start site region 68395
Tssr68396 7 105736776 to 105736785 9 + TSS region transcription start site region 68396
Tssr68397 7 105736884 to 105736908 24 + TSS region transcription start site region 68397
Tssr74088 7 105737238 to 105737275 37 - TSS region transcription start site region 74088
Tssr74089 7 105737291 to 105737313 22 - TSS region transcription start site region 74089
Tssr74090 7 105737339 to 105737398 59 - TSS region transcription start site region 74090
Tssr74091 7 105739139 to 105739143 4 - TSS region transcription start site region 74091
Tssr68398 7 105740280 to 105740295 15 + TSS region transcription start site region 68398
Tssr68399 7 105742522 to 105742538 16 + TSS region transcription start site region 68399
Tssr68400 7 105742543 to 105742560 17 + TSS region transcription start site region 68400
Taf10 7 105742894 to 105744379 1485 - protein coding gene TATA-box binding protein associated factor 10
Cpgi19543 7 105743511 to 105744700 1189 CpG island CpG island 19543
Tssr74092 7 105743925 to 105743947 22 - TSS region transcription start site region 74092
Tssr74093 7 105744312 to 105744358 46 - TSS region transcription start site region 74093
Tpp1 7 105744811 to 105752235 7424 - protein coding gene tripeptidyl peptidase I
Tssr74094 7 105745669 to 105745690 21 - TSS region transcription start site region 74094
Tssr74095 7 105745765 to 105745781 16 - TSS region transcription start site region 74095
Tssr74096 7 105746473 to 105746496 23 - TSS region transcription start site region 74096
Tssr74097 7 105746503 to 105746530 27 - TSS region transcription start site region 74097
Tssr74098 7 105746534 to 105746587 53 - TSS region transcription start site region 74098
Tssr74099 7 105746599 to 105746619 20 - TSS region transcription start site region 74099
Tssr74100 7 105746668 to 105746690 22 - TSS region transcription start site region 74100
Tssr74101 7 105747771 to 105747787 16 - TSS region transcription start site region 74101
Tssr74102 7 105749681 to 105749714 33 - TSS region transcription start site region 74102
Tssr74103 7 105750266 to 105750300 34 - TSS region transcription start site region 74103
D7Mit95 7 105751411 to 105751503 92 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 95
Tssr2359 7 105752010 to 105752027 17 - TSS region transcription start site region 2359
Tssr74104 7 105752193 to 105752234 41 - TSS region transcription start site region 74104
Dchs1 7 105752990 to 105787654 34664 - protein coding gene dachsous cadherin related 1
Cpgi19544 7 105761809 to 105763050 1241 CpG island CpG island 19544
Cpgi19545 7 105786824 to 105788072 1248 CpG island CpG island 19545
Tssr74105 7 105787483 to 105787494 11 - TSS region transcription start site region 74105
Tssr74106 7 105787506 to 105787523 17 - TSS region transcription start site region 74106
Tssr74107 7 105787544 to 105787555 11 - TSS region transcription start site region 74107
Tssr74108 7 105787567 to 105787639 72 - TSS region transcription start site region 74108
D7Mit302 7 105794470 to 105794615 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 302
Mrpl17 7 105803782 to 105811087 7305 - protein coding gene mitochondrial ribosomal protein L17
Cpgi19546 7 105810417 to 105811454 1037 CpG island CpG island 19546
Tssr74109 7 105810947 to 105811095 148 - TSS region transcription start site region 74109
Gm45912 7 105823264 to 105823806 542 - unclassified gene predicted gene 45912
9130208D14Rik 7 105824223 to 105831515 7292 - pseudogene RIKEN cDNA 9130208D14 gene
Gm15645 7 105861781 to 105863327 1546 + pseudogene predicted gene 15645
Gm45684 7 105885296 to 105886866 1570 - unclassified gene predicted gene 45684
Gm4070 7 105895139 to 105953967 58828 - protein coding gene predicted gene 4070
Gm20663 7 105901568 to 106093337 191769 + antisense lncRNA gene predicted gene 20663
Gm18852 7 105925000 to 105928592 3592 - pseudogene predicted gene, 18852
Gm27228 7 106038167 to 106039204 1037 - pseudogene predicted gene 27228
Gm8979 7 106075731 to 106079148 3417 - pseudogene predicted gene 8979
Gm27149 7 106091210 to 106092475 1265 - pseudogene predicted gene 27149
Tssr74110 7 106117300 to 106117324 24 - TSS region transcription start site region 74110
Gm8982 7 106123187 to 106124727 1540 + pseudogene predicted gene 8982
Gvin1 7 106156556 to 106215326 58770 - protein coding gene GTPase, very large interferon inducible 1
Gm18853 7 106186404 to 106189999 3595 - pseudogene predicted gene, 18853
Tssr2360 7 106264062 to 106264072 10 + TSS region transcription start site region 2360
Gm27150 7 106286445 to 106287482 1037 - pseudogene predicted gene 27150
Gm8989 7 106322396 to 106324528 2132 - pseudogene predicted gene 8989
Tssr74111 7 106352674 to 106352688 14 - TSS region transcription start site region 74111
Gm4759 7 106417848 to 106424469 6621 - pseudogene predicted gene 4759
Gm22372 7 106426712 to 106426847 135 + snoRNA gene predicted gene, 22372
Tssr74112 7 106441080 to 106441098 18 - TSS region transcription start site region 74112
Tssr74113 7 106441103 to 106441112 9 - TSS region transcription start site region 74113
Tssr74114 7 106502125 to 106502136 11 - TSS region transcription start site region 74114
Tssr74115 7 106502911 to 106502923 12 - TSS region transcription start site region 74115
Tssr74116 7 106503046 to 106503071 25 - TSS region transcription start site region 74116
Tssr74117 7 106503515 to 106503526 11 - TSS region transcription start site region 74117
Tssr74118 7 106503544 to 106503573 29 - TSS region transcription start site region 74118
Tssr68401 7 106503604 to 106503638 34 + TSS region transcription start site region 68401
Tssr74119 7 106503959 to 106503971 12 - TSS region transcription start site region 74119
Tssr74120 7 106503977 to 106503988 11 - TSS region transcription start site region 74120
Tssr74121 7 106504012 to 106504051 39 - TSS region transcription start site region 74121
Tssr74122 7 106504054 to 106504068 14 - TSS region transcription start site region 74122
Tssr74123 7 106504073 to 106504101 28 - TSS region transcription start site region 74123
Tssr74124 7 106504104 to 106504146 42 - TSS region transcription start site region 74124
Tssr74125 7 106504149 to 106504157 8 - TSS region transcription start site region 74125
Tssr74126 7 106504163 to 106504193 30 - TSS region transcription start site region 74126
Gm8995 7 106504239 to 106511671 7432 - pseudogene predicted gene 8995
Tssr74127 7 106504315 to 106504344 29 - TSS region transcription start site region 74127
Tssr74128 7 106504412 to 106504424 12 - TSS region transcription start site region 74128
Tssr74129 7 106504945 to 106504955 10 - TSS region transcription start site region 74129
Tssr74130 7 106504992 to 106505004 12 - TSS region transcription start site region 74130
Tssr74131 7 106505172 to 106505215 43 - TSS region transcription start site region 74131
Tssr74132 7 106505341 to 106505391 50 - TSS region transcription start site region 74132
Tssr74133 7 106506040 to 106506048 8 - TSS region transcription start site region 74133
Tssr74134 7 106506267 to 106506303 36 - TSS region transcription start site region 74134
Tssr74135 7 106506350 to 106506383 33 - TSS region transcription start site region 74135
Tssr74136 7 106506418 to 106506429 11 - TSS region transcription start site region 74136
Tssr74137 7 106506484 to 106506495 11 - TSS region transcription start site region 74137
Tssr74138 7 106506514 to 106506533 19 - TSS region transcription start site region 74138
Tssr74139 7 106506548 to 106506575 27 - TSS region transcription start site region 74139
Tssr74140 7 106506603 to 106506628 25 - TSS region transcription start site region 74140
Tssr74141 7 106507003 to 106507018 15 - TSS region transcription start site region 74141
Tssr74142 7 106507146 to 106507172 26 - TSS region transcription start site region 74142
Tssr74143 7 106509211 to 106509226 15 - TSS region transcription start site region 74143
Tssr74144 7 106509401 to 106509429 28 - TSS region transcription start site region 74144
Tssr74145 7 106509506 to 106509514 8 - TSS region transcription start site region 74145
Tssr74146 7 106510054 to 106510073 19 - TSS region transcription start site region 74146
Tssr74147 7 106510122 to 106510133 11 - TSS region transcription start site region 74147
Tssr74148 7 106510398 to 106510419 21 - TSS region transcription start site region 74148
Tssr74149 7 106510877 to 106510889 12 - TSS region transcription start site region 74149
Tssr74150 7 106510912 to 106510925 13 - TSS region transcription start site region 74150
Tssr68402 7 106511252 to 106511318 66 + TSS region transcription start site region 68402
Tssr74151 7 106511285 to 106511299 14 - TSS region transcription start site region 74151
Tssr74152 7 106511531 to 106511553 22 - TSS region transcription start site region 74152
Tssr74153 7 106511570 to 106511591 21 - TSS region transcription start site region 74153
Tssr74154 7 106511613 to 106511631 18 - TSS region transcription start site region 74154
Tssr74155 7 106513750 to 106513761 11 - TSS region transcription start site region 74155
Tssr74156 7 106519176 to 106519189 13 - TSS region transcription start site region 74156
Tssr74157 7 106529158 to 106529202 44 - TSS region transcription start site region 74157
Gm39065 7 106561045 to 106567925 6880 - lncRNA gene predicted gene, 39065
Gm1966 7 106596743 to 106604035 7292 - pseudogene predicted gene 1966
Tssr74158 7 106644629 to 106644663 34 - TSS region transcription start site region 74158
Olfr693 7 106677534 to 106678485 951 - protein coding gene olfactory receptor 693
Gm44857 7 106685003 to 106685198 195 + pseudogene predicted gene 44857
Olfr694 7 106688782 to 106691307 2525 - protein coding gene olfactory receptor 694
Olfr695 7 106713732 to 106716345 2613 - protein coding gene olfactory receptor 695
Olfr696-ps1 7 106728872 to 106729819 947 - pseudogene olfactory receptor 696, pseudogene 1
Olfr697 7 106740905 to 106741956 1051 - protein coding gene olfactory receptor 697
Olfr698 7 106752451 to 106753386 935 - protein coding gene olfactory receptor 698
Olfr699 7 106790049 to 106790999 950 - protein coding gene olfactory receptor 699
Olfr700 7 106805510 to 106806460 950 - protein coding gene olfactory receptor 700
4930458B22Rik 7 106809931 to 106814102 4171 - lincRNA gene RIKEN cDNA 4930458B22 gene
Tssr74159 7 106814083 to 106814089 6 - TSS region transcription start site region 74159
Tssr68403 7 106814135 to 106814160 25 + TSS region transcription start site region 68403
Olfr701 7 106814144 to 106820709 6565 + protein coding gene olfactory receptor 701
Olfr702 7 106823489 to 106826743 3254 - protein coding gene olfactory receptor 702
Olfr703 7 106844613 to 106845572 959 + protein coding gene olfactory receptor 703
Olfr704 7 106864982 to 106865929 947 + protein coding gene olfactory receptor 704
Olfr705 7 106873293 to 106874243 950 - protein coding gene olfactory receptor 705
Olfr706 7 106885865 to 106886815 950 - protein coding gene olfactory receptor 706
Olfr707 7 106891184 to 106892107 923 - protein coding gene olfactory receptor 707
D7Dcr45 7 106900426 to 106900529 103 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 45
D7Mit355 7 106900429 to 106900548 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 355
Olfr1532-ps1 7 106908126 to 106915123 6997 + protein coding gene olfactory receptor 1532, pseudogene 1
Olfr709-ps1 7 106926537 to 106927457 920 - pseudogene olfactory receptor 709, pseudogene 1
Olfr710 7 106944067 to 106948312 4245 - protein coding gene olfactory receptor 710
Gm44582 7 106952228 to 106952672 444 + pseudogene predicted gene 44582
Olfr6 7 106955984 to 106956934 950 - protein coding gene olfactory receptor 6
Olfr711 7 106971368 to 106975451 4083 - protein coding gene olfactory receptor 711
Tssr74160 7 106985398 to 106985410 12 - TSS region transcription start site region 74160
Olfr712-ps1 7 106988364 to 106989666 1302 - pseudogene olfactory receptor 712, pseudogene 1
Olfr2 7 107000875 to 107005558 4683 - protein coding gene olfactory receptor 2
Olfr713 7 107036136 to 107037110 974 + protein coding gene olfactory receptor 713
Gm17991 7 107068674 to 107069292 618 + pseudogene predicted gene, 17991
Olfr714 7 107073830 to 107074783 953 + protein coding gene olfactory receptor 714
Gm45023 7 107075261 to 107075639 378 - pseudogene predicted gene 45023
Olfr17 7 107097467 to 107098414 947 + protein coding gene olfactory receptor 17
Olfr715b 7 107105912 to 107106859 947 - protein coding gene olfactory receptor 715B
Gm45868 7 107113388 to 107127822 14434 + lincRNA gene predicted gene 45868
Olfr715 7 107128352 to 107129482 1130 - protein coding gene olfactory receptor 715
Olfr716 7 107147318 to 107148262 944 + protein coding gene olfactory receptor 716
Tssr68404 7 107166987 to 107166991 4 + TSS region transcription start site region 68404
Nlrp14 7 107166990 to 107198102 31112 + protein coding gene NLR family, pyrin domain containing 14
Tssr68405 7 107187093 to 107187146 53 + TSS region transcription start site region 68405
Tssr68406 7 107187166 to 107187171 5 + TSS region transcription start site region 68406
Gm3765 7 107198743 to 107200189 1446 - pseudogene predicted gene 3765
4930513L20Rik 7 107204547 to 107205864 1317 unclassified gene RIKEN cDNA 4930513L20 gene
Tssr68407 7 107209167 to 107209177 10 + TSS region transcription start site region 68407
Tssr68408 7 107209182 to 107209199 17 + TSS region transcription start site region 68408
Cpgi19547 7 107209208 to 107210736 1528 CpG island CpG island 19547
Tssr74161 7 107209242 to 107209253 11 - TSS region transcription start site region 74161
Tssr68409 7 107209377 to 107209383 6 + TSS region transcription start site region 68409
Tssr68410 7 107209384 to 107209404 20 + TSS region transcription start site region 68410
Tssr68411 7 107209439 to 107209451 12 + TSS region transcription start site region 68411
Rbmxl2 7 107209445 to 107210916 1471 + protein coding gene RNA binding motif protein, X-linked-like 2
Tssr68412 7 107209468 to 107209484 16 + TSS region transcription start site region 68412
Platr28 7 107243022 to 107300396 57374 + lincRNA gene pluripotency associated transcript 28
Gm24932 7 107319654 to 107319763 109 - miRNA gene predicted gene, 24932
Gm19033 7 107366072 to 107367035 963 + pseudogene predicted gene, 19033
D7Mit262 7 107369820 to 107369927 107 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 262
Cpgi19548 7 107370176 to 107371788 1612 CpG island CpG island 19548
Tssr68413 7 107370712 to 107370730 18 + TSS region transcription start site region 68413
Syt9 7 107370728 to 107548656 177928 + protein coding gene synaptotagmin IX
Tssr68414 7 107370745 to 107370848 103 + TSS region transcription start site region 68414
Tssr68415 7 107422666 to 107422670 4 + TSS region transcription start site region 68415
D7Mit324 7 107509644 to 107509736 92 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 324
A930026C06Rik 7 107517531 to 107519548 2017 unclassified gene RIKEN cDNA A930026C06 gene
Tssr68416 7 107567424 to 107567440 16 + TSS region transcription start site region 68416
Tssr68417 7 107567445 to 107567461 16 + TSS region transcription start site region 68417
Olfml1 7 107567446 to 107591094 23648 + protein coding gene olfactomedin-like 1
Tssr68418 7 107567647 to 107567708 61 + TSS region transcription start site region 68418
Tssr68419 7 107567718 to 107567746 28 + TSS region transcription start site region 68419
Gm44773 7 107592950 to 107593506 556 + lincRNA gene predicted gene 44773
Tssr68420 7 107594105 to 107594130 25 + TSS region transcription start site region 68420
Cpgi19549 7 107594608 to 107595669 1061 CpG island CpG island 19549
Tssr68421 7 107595032 to 107595060 28 + TSS region transcription start site region 68421
Tssr68422 7 107595068 to 107595085 17 + TSS region transcription start site region 68422
Tssr68423 7 107595184 to 107595233 49 + TSS region transcription start site region 68423
Ppfibp2 7 107595207 to 107748583 153376 + protein coding gene PTPRF interacting protein, binding protein 2 (liprin beta 2)