Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:105630827-105741799

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim3 7 105604463 to 105633571 29108 - protein coding gene tripartite motif-containing 3
Cpgi19540 7 105632934 to 105633998 1064 CpG island CpG island 19540
Tssr74079 7 105633433 to 105633442 9 - TSS region transcription start site region 74079
Tssr74080 7 105633460 to 105633477 17 - TSS region transcription start site region 74080
Tssr74081 7 105633479 to 105633521 42 - TSS region transcription start site region 74081
Tssr74082 7 105633525 to 105633601 76 - TSS region transcription start site region 74082
Arfip2 7 105634203 to 105640416 6213 - protein coding gene ADP-ribosylation factor interacting protein 2
Timm10b 7 105640056 to 105643637 3581 + protein coding gene translocase of inner mitochondrial membrane 10B
Cpgi19541 7 105640084 to 105641221 1137 CpG island CpG island 19541
Tssr74083 7 105640317 to 105640370 53 - TSS region transcription start site region 74083
Tssr2358 7 105640416 to 105640421 5 + TSS region transcription start site region 2358
Tssr68382 7 105640463 to 105640514 51 + TSS region transcription start site region 68382
Tssr68383 7 105640522 to 105640586 64 + TSS region transcription start site region 68383
Gm45799 7 105640552 to 105684439 43887 + protein coding gene predicted gene 45799
Tssr68384 7 105640783 to 105640809 26 + TSS region transcription start site region 68384
Tssr68385 7 105640996 to 105641027 31 + TSS region transcription start site region 68385
Tssr68386 7 105641052 to 105641070 18 + TSS region transcription start site region 68386
Tssr68387 7 105642337 to 105642342 5 + TSS region transcription start site region 68387
Gm22504 7 105642338 to 105642476 138 - snoRNA gene predicted gene, 22504
Tssr68388 7 105642615 to 105642622 7 + TSS region transcription start site region 68388
Tssr68389 7 105648203 to 105648206 3 + TSS region transcription start site region 68389
Tssr68390 7 105650769 to 105650798 29 + TSS region transcription start site region 68390
Tssr68391 7 105650813 to 105650833 20 + TSS region transcription start site region 68391
Dnhd1 7 105650827 to 105721799 70972 + protein coding gene dynein heavy chain domain 1
Mrps36-ps2 7 105690259 to 105690567 308 - pseudogene mitochondrial ribosomal protein S36, pseudogene 2
Rrp8 7 105731730 to 105737385 5655 - protein coding gene ribosomal RNA processing 8, methyltransferase, homolog (yeast)
Cpgi19542 7 105736100 to 105737398 1298 CpG island CpG island 19542
Tssr74084 7 105736390 to 105736404 14 - TSS region transcription start site region 74084
Tssr74085 7 105736426 to 105736441 15 - TSS region transcription start site region 74085
Tssr74086 7 105736447 to 105736488 41 - TSS region transcription start site region 74086
Tssr74087 7 105736490 to 105736534 44 - TSS region transcription start site region 74087
Tssr68392 7 105736565 to 105736589 24 + TSS region transcription start site region 68392
Ilk 7 105736592 to 105742925 6333 + protein coding gene integrin linked kinase
Tssr68393 7 105736644 to 105736698 54 + TSS region transcription start site region 68393
Tssr68394 7 105736702 to 105736735 33 + TSS region transcription start site region 68394
Tssr68395 7 105736746 to 105736764 18 + TSS region transcription start site region 68395
Tssr68396 7 105736776 to 105736785 9 + TSS region transcription start site region 68396
Tssr68397 7 105736884 to 105736908 24 + TSS region transcription start site region 68397
Tssr74088 7 105737238 to 105737275 37 - TSS region transcription start site region 74088
Tssr74089 7 105737291 to 105737313 22 - TSS region transcription start site region 74089
Tssr74090 7 105737339 to 105737398 59 - TSS region transcription start site region 74090
Tssr74091 7 105739139 to 105739143 4 - TSS region transcription start site region 74091
Tssr68398 7 105740280 to 105740295 15 + TSS region transcription start site region 68398