Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:105352200-105612216

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr692 7 105368328 to 105369317 989 + protein coding gene olfactory receptor 692
Fam160a2 7 105371211 to 105400054 28843 - protein coding gene family with sequence similarity 160, member A2
Tssr68374 7 105375025 to 105375044 19 + TSS region transcription start site region 68374
Tssr68375 7 105375053 to 105375072 19 + TSS region transcription start site region 68375
Gm5901 7 105375095 to 105378377 3282 + protein coding gene predicted gene 5901
Tssr74030 7 105395558 to 105395577 19 - TSS region transcription start site region 74030
Tssr74031 7 105395781 to 105395801 20 - TSS region transcription start site region 74031
Tssr74032 7 105396179 to 105396185 6 - TSS region transcription start site region 74032
Tssr74033 7 105396212 to 105396224 12 - TSS region transcription start site region 74033
Tssr74034 7 105396231 to 105396242 11 - TSS region transcription start site region 74034
Cpgi19532 7 105399405 to 105400741 1336 CpG island CpG island 19532
Tssr74035 7 105399965 to 105399982 17 - TSS region transcription start site region 74035
Tssr74036 7 105399991 to 105400023 32 - TSS region transcription start site region 74036
Gm45885 7 105400314 to 105401892 1578 + bidirectional promoter lncRNA gene predicted gene 45885
Cnga4 7 105404568 to 105408742 4174 + protein coding gene cyclic nucleotide gated channel alpha 4
Cpgi19533 7 105405521 to 105406005 484 CpG island CpG island 19533
Gm4972 7 105412720 to 105413973 1253 - pseudogene predicted gene 4972
Cpgi19534 7 105425401 to 105426246 845 CpG island CpG island 19534
Cckbr 7 105425559 to 105436339 10780 + protein coding gene cholecystokinin B receptor
Tssr68376 7 105425934 to 105426002 68 + TSS region transcription start site region 68376
Cpgi19535 7 105433644 to 105434219 575 CpG island CpG island 19535
Cpgi19536 7 105434518 to 105435443 925 CpG island CpG island 19536
Cavin3 7 105480616 to 105482197 1581 - protein coding gene caveolae associated 3
Tssr68377 7 105480953 to 105480999 46 + TSS region transcription start site region 68377
Cpgi19537 7 105481529 to 105482382 853 CpG island CpG island 19537
Tssr74037 7 105481853 to 105481904 51 - TSS region transcription start site region 74037
Tssr74038 7 105481925 to 105481940 15 - TSS region transcription start site region 74038
Gm45667 7 105481927 to 105483242 1315 + unclassified gene predicted gene 45667
Tssr74039 7 105481953 to 105481964 11 - TSS region transcription start site region 74039
Tssr74040 7 105482200 to 105482216 16 - TSS region transcription start site region 74040
Gm36847 7 105482644 to 105522672 40028 + lncRNA gene predicted gene, 36847
Gm39063 7 105544901 to 105554275 9374 - lncRNA gene predicted gene, 39063
Cpgi19538 7 105554086 to 105554478 392 CpG island CpG island 19538
Smpd1 7 105554360 to 105558389 4029 + protein coding gene sphingomyelin phosphodiesterase 1, acid lysosomal
Tssr68378 7 105554378 to 105554487 109 + TSS region transcription start site region 68378
Tssr68379 7 105554499 to 105554514 15 + TSS region transcription start site region 68379
Apbb1 7 105558483 to 105581653 23170 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1
Tssr74041 7 105565475 to 105565489 14 - TSS region transcription start site region 74041
Tssr74042 7 105565500 to 105565523 23 - TSS region transcription start site region 74042
Tssr74043 7 105565571 to 105565589 18 - TSS region transcription start site region 74043
Tssr74044 7 105568646 to 105568675 29 - TSS region transcription start site region 74044
Tssr74045 7 105569282 to 105569315 33 - TSS region transcription start site region 74045
Tssr68380 7 105569379 to 105569393 14 + TSS region transcription start site region 68380
Tssr74046 7 105574324 to 105574329 5 - TSS region transcription start site region 74046
Cpgi19539 7 105580623 to 105581726 1103 CpG island CpG island 19539
Tssr74047 7 105581200 to 105581271 71 - TSS region transcription start site region 74047
Tssr74048 7 105581272 to 105581283 11 - TSS region transcription start site region 74048
Tssr74049 7 105581501 to 105581569 68 - TSS region transcription start site region 74049
Tssr74050 7 105581598 to 105581614 16 - TSS region transcription start site region 74050
Hpx 7 105591611 to 105600116 8505 - protein coding gene hemopexin
Tssr74051 7 105591686 to 105591697 11 - TSS region transcription start site region 74051
Tssr74052 7 105591774 to 105591821 47 - TSS region transcription start site region 74052
Tssr74053 7 105591836 to 105591863 27 - TSS region transcription start site region 74053
Tssr74054 7 105592180 to 105592213 33 - TSS region transcription start site region 74054
Tssr74055 7 105592358 to 105592383 25 - TSS region transcription start site region 74055
Tssr74056 7 105592384 to 105592428 44 - TSS region transcription start site region 74056
Tssr74057 7 105592436 to 105592466 30 - TSS region transcription start site region 74057
Tssr74058 7 105595104 to 105595207 103 - TSS region transcription start site region 74058
Tssr74059 7 105595529 to 105595539 10 - TSS region transcription start site region 74059
Tssr74060 7 105595540 to 105595547 7 - TSS region transcription start site region 74060
Tssr74061 7 105595569 to 105595595 26 - TSS region transcription start site region 74061
Tssr74062 7 105595607 to 105595619 12 - TSS region transcription start site region 74062
Tssr74063 7 105595620 to 105595629 9 - TSS region transcription start site region 74063
Tssr74064 7 105595645 to 105595656 11 - TSS region transcription start site region 74064
Tssr74065 7 105595672 to 105595682 10 - TSS region transcription start site region 74065
Tssr68381 7 105596278 to 105596306 28 + TSS region transcription start site region 68381
Tssr74066 7 105596323 to 105596355 32 - TSS region transcription start site region 74066
Tssr74067 7 105596362 to 105596367 5 - TSS region transcription start site region 74067
Tssr74068 7 105596373 to 105596380 7 - TSS region transcription start site region 74068
Tssr74069 7 105596415 to 105596425 10 - TSS region transcription start site region 74069
Tssr74070 7 105598815 to 105598819 4 - TSS region transcription start site region 74070
Tssr74071 7 105599286 to 105599291 5 - TSS region transcription start site region 74071
Tssr74072 7 105599296 to 105599329 33 - TSS region transcription start site region 74072
Tssr74073 7 105599332 to 105599346 14 - TSS region transcription start site region 74073
Tssr74074 7 105599353 to 105599380 27 - TSS region transcription start site region 74074
Tssr74075 7 105599697 to 105599715 18 - TSS region transcription start site region 74075
Tssr74076 7 105599716 to 105599743 27 - TSS region transcription start site region 74076
Tssr74077 7 105600103 to 105600123 20 - TSS region transcription start site region 74077
Trim3 7 105604463 to 105633571 29108 - protein coding gene tripartite motif-containing 3
Tssr74078 7 105610914 to 105610931 17 - TSS region transcription start site region 74078