Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:10490745-11525547

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zik1 7 10487224 to 10495381 8157 - protein coding gene zinc finger protein interacting with K protein 1
Cpgi18311 7 10495028 to 10495595 567 CpG island CpG island 18311
Tssr70617 7 10495322 to 10495401 79 - TSS region transcription start site region 70617
Gm18193 7 10498013 to 10498755 742 - pseudogene predicted gene, 18193
Vmn1r68 7 10527210 to 10528169 959 - protein coding gene vomeronasal 1 receptor 68
Tssr2078 7 10536717 to 10536719 2 + TSS region transcription start site region 2078
Vmn1r-ps49 7 10549557 to 10550435 878 - pseudogene vomeronasal 1 receptor, pseudogene 49
Vmn1r69 7 10579756 to 10581487 1731 - protein coding gene vomeronasal 1 receptor 69
Vmn1r-ps50 7 10604744 to 10605196 452 - pseudogene vomeronasal 1 receptor, pseudogene 50
Vmn1r70 7 10633587 to 10634483 896 + protein coding gene vomeronasal 1 receptor 70
Tssr64467 7 10636801 to 10636804 3 + TSS region transcription start site region 64467
Vmn1r-ps51 7 10650299 to 10650618 319 + pseudogene vomeronasal 1 receptor, pseudogene 51
Gm6900 7 10656479 to 10656820 341 - pseudogene predicted gene 6900
Tssr70618 7 10656968 to 10656977 9 - TSS region transcription start site region 70618
Vmn1r-ps52 7 10666777 to 10667627 850 - pseudogene vomeronasal 1 receptor, pseudogene 52
Tssr64468 7 10687791 to 10687792 1 + TSS region transcription start site region 64468
Nlrp4b 7 10687793 to 10730168 42375 + protein coding gene NLR family, pyrin domain containing 4B
D7Ertd595e 7 10716210 to 10716413 203 DNA segment DNA segment, Chr 7, ERATO Doi 595, expressed
Gm45379 7 10716314 to 10716862 548 + sense intronic lncRNA gene predicted gene 45379
Gm5130 7 10745268 to 10746226 958 + pseudogene predicted gene 5130
Vmn1r71 7 10747502 to 10749538 2036 - protein coding gene vomeronasal 1 receptor 71
Gm45438 7 10780155 to 10780718 563 - pseudogene predicted gene 45438
Zscan4a 7 10794242 to 10799057 4815 - pseudogene zinc finger and SCAN domain containing 4A
Gm18781 7 10805245 to 10806168 923 + pseudogene predicted gene, 18781
Gm7203 7 10810865 to 10821006 10141 + pseudogene predicted gene 7203
Gm4903 7 10845737 to 10846141 404 - pseudogene predicted gene 4903
Gm7836 7 10850763 to 10851194 431 - pseudogene predicted gene 7836
Gm18638 7 10881188 to 10882413 1225 - pseudogene predicted gene, 18638
Zscan4b 7 10900740 to 10905050 4310 - protein coding gene zinc finger and SCAN domain containing 4B
Gm45279 7 10908911 to 10909301 390 + pseudogene predicted gene 45279
Mir297-1 7 10958437 to 10958512 75 - miRNA gene microRNA 297-1
Gm7786 7 10975368 to 10975803 435 + pseudogene predicted gene 7786
Gm7789 7 10988507 to 10995982 7475 - pseudogene predicted pseudogene 7789
Gm18122 7 11001101 to 11001941 840 - pseudogene predicted gene, 18122
Zscan4c 7 11005745 to 11010547 4802 + protein coding gene zinc finger and SCAN domain containing 4C
Gm45327 7 11020329 to 11020893 564 + pseudogene predicted gene 45327
Gm45395 7 11047284 to 11047842 558 - pseudogene predicted gene 45395
Zscan4-ps1 7 11065139 to 11069691 4552 - pseudogene zinc finger and SCAN domain containing 4, pseudogene 1
Gm33601 7 11075671 to 11076631 960 + pseudogene predicted gene, 33601
Gm7151 7 11082883 to 11089602 6719 + pseudogene predicted gene 7151
Gm4157 7 11107677 to 11108355 678 - pseudogene predicted gene 4157
Gm3774 7 11112954 to 11113388 434 - pseudogene predicted gene 3774
Gm38430 7 11149257 to 11150496 1239 - pseudogene predicted gene, 38430
Zscan4d 7 11161374 to 11166159 4785 - protein coding gene zinc finger and SCAN domain containing 4D
Gm42381 7 11168664 to 11315318 146654 + pseudogene predicted gene, 42381
Gm18204 7 11176225 to 11176943 718 + pseudogene predicted gene, 18204
Gm6909 7 11182400 to 11188803 6403 + pseudogene predicted gene 6909
Gm9689 7 11201406 to 11211327 9921 - pseudogene predicted gene 9689
Gm39481 7 11233147 to 11237022 3875 + pseudogene predicted gene, 39481
Gm5996 7 11248404 to 11249121 717 - pseudogene predicted gene 5996
Gm9652 7 11253702 to 11253864 162 - pseudogene predicted gene 9652
Gm19683 7 11284213 to 11285438 1225 - pseudogene predicted gene, 19683
Gm26248 7 11303218 to 11303338 120 - miRNA gene predicted gene, 26248
Zscan4e 7 11306378 to 11310682 4304 - protein coding gene zinc finger and SCAN domain containing 4E
Gm45870 7 11314461 to 11315061 600 + pseudogene predicted gene 45870
Gm23087 7 11350450 to 11350525 75 - miRNA gene predicted gene, 23087
Gm45596 7 11367374 to 11367807 433 + pseudogene predicted gene 45596
Gm45598 7 11380620 to 11387584 6964 - pseudogene predicted gene 45598
Gm18123 7 11393304 to 11394125 821 - pseudogene predicted gene, 18123
Zscan4f 7 11397915 to 11402318 4403 + protein coding gene zinc finger and SCAN domain containing 4F
Gm18639 7 11415356 to 11416608 1252 + pseudogene predicted gene, 18639
Gm9604 7 11443992 to 11444424 432 + pseudogene predicted gene 9604
Gm7839 7 11449014 to 11449686 672 + pseudogene predicted gene 7839
Gm45382 7 11454894 to 11455044 150 - pseudogene predicted gene 45382
Gm7207 7 11460899 to 11468583 7684 - pseudogene predicted gene 7207
Gm45550 7 11473372 to 11474317 945 - pseudogene predicted gene 45550
Gm45551 7 11478208 to 11479567 1359 + pseudogene predicted gene 45551
Gm45549 7 11497020 to 11503996 6976 - pseudogene predicted gene 45549
Gm18124 7 11509861 to 11510566 705 - pseudogene predicted gene, 18124
Tssr64469 7 11514286 to 11514287 1 + TSS region transcription start site region 64469
Zscan4-ps2 7 11514287 to 11518688 4401 + pseudogene zinc finger and SCAN domain containing 4, pseudogene 2