Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:10480155-11080718

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zik1 7 10487224 to 10495381 8157 - protein coding gene zinc finger protein interacting with K protein 1
Cpgi18311 7 10495028 to 10495595 567 CpG island CpG island 18311
Tssr70617 7 10495322 to 10495401 79 - TSS region transcription start site region 70617
Gm18193 7 10498013 to 10498755 742 - pseudogene predicted gene, 18193
Vmn1r68 7 10527210 to 10528169 959 - protein coding gene vomeronasal 1 receptor 68
Tssr2078 7 10536717 to 10536719 2 + TSS region transcription start site region 2078
Vmn1r-ps49 7 10549557 to 10550435 878 - pseudogene vomeronasal 1 receptor, pseudogene 49
Vmn1r69 7 10579756 to 10581487 1731 - protein coding gene vomeronasal 1 receptor 69
Vmn1r-ps50 7 10604744 to 10605196 452 - pseudogene vomeronasal 1 receptor, pseudogene 50
Vmn1r70 7 10633587 to 10634483 896 + protein coding gene vomeronasal 1 receptor 70
Tssr64467 7 10636801 to 10636804 3 + TSS region transcription start site region 64467
Vmn1r-ps51 7 10650299 to 10650618 319 + pseudogene vomeronasal 1 receptor, pseudogene 51
Gm6900 7 10656479 to 10656820 341 - pseudogene predicted gene 6900
Tssr70618 7 10656968 to 10656977 9 - TSS region transcription start site region 70618
Vmn1r-ps52 7 10666777 to 10667627 850 - pseudogene vomeronasal 1 receptor, pseudogene 52
Tssr64468 7 10687791 to 10687792 1 + TSS region transcription start site region 64468
Nlrp4b 7 10687793 to 10730168 42375 + protein coding gene NLR family, pyrin domain containing 4B
D7Ertd595e 7 10716210 to 10716413 203 DNA segment DNA segment, Chr 7, ERATO Doi 595, expressed
Gm45379 7 10716314 to 10716862 548 + sense intronic lncRNA gene predicted gene 45379
Gm5130 7 10745268 to 10746226 958 + pseudogene predicted gene 5130
Vmn1r71 7 10747502 to 10749538 2036 - protein coding gene vomeronasal 1 receptor 71
Gm45438 7 10780155 to 10780718 563 - pseudogene predicted gene 45438
Zscan4a 7 10794242 to 10799057 4815 - pseudogene zinc finger and SCAN domain containing 4A
Gm18781 7 10805245 to 10806168 923 + pseudogene predicted gene, 18781
Gm7203 7 10810865 to 10821006 10141 + pseudogene predicted gene 7203
Gm4903 7 10845737 to 10846141 404 - pseudogene predicted gene 4903
Gm7836 7 10850763 to 10851194 431 - pseudogene predicted gene 7836
Gm18638 7 10881188 to 10882413 1225 - pseudogene predicted gene, 18638
Zscan4b 7 10900740 to 10905050 4310 - protein coding gene zinc finger and SCAN domain containing 4B
Gm45279 7 10908911 to 10909301 390 + pseudogene predicted gene 45279
Mir297-1 7 10958437 to 10958512 75 - miRNA gene microRNA 297-1
Gm7786 7 10975368 to 10975803 435 + pseudogene predicted gene 7786
Gm7789 7 10988507 to 10995982 7475 - pseudogene predicted pseudogene 7789
Gm18122 7 11001101 to 11001941 840 - pseudogene predicted gene, 18122
Zscan4c 7 11005745 to 11010547 4802 + protein coding gene zinc finger and SCAN domain containing 4C
Gm45327 7 11020329 to 11020893 564 + pseudogene predicted gene 45327
Gm45395 7 11047284 to 11047842 558 - pseudogene predicted gene 45395
Zscan4-ps1 7 11065139 to 11069691 4552 - pseudogene zinc finger and SCAN domain containing 4, pseudogene 1
Gm33601 7 11075671 to 11076631 960 + pseudogene predicted gene, 33601