Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:104421323-106771355

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322 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim30a 7 104409025 to 104465193 56168 - protein coding gene tripartite motif-containing 30A
Gm25405 7 104423274 to 104423380 106 + snRNA gene predicted gene, 25405
Tssr74017 7 104428485 to 104428497 12 - TSS region transcription start site region 74017
Tssr74018 7 104428534 to 104428545 11 - TSS region transcription start site region 74018
Tssr74019 7 104434753 to 104434784 31 - TSS region transcription start site region 74019
Tssr74020 7 104435716 to 104435735 19 - TSS region transcription start site region 74020
Tssr74021 7 104439292 to 104439307 15 - TSS region transcription start site region 74021
Tssr74022 7 104441390 to 104441423 33 - TSS region transcription start site region 74022
Tssr74023 7 104446047 to 104446060 13 - TSS region transcription start site region 74023
Tssr74024 7 104446070 to 104446103 33 - TSS region transcription start site region 74024
Tssr74025 7 104463630 to 104463676 46 - TSS region transcription start site region 74025
Tssr74026 7 104465141 to 104465175 34 - TSS region transcription start site region 74026
Tssr74027 7 104465177 to 104465188 11 - TSS region transcription start site region 74027
Tssr68372 7 104465673 to 104465686 13 + TSS region transcription start site region 68372
Trim30d 7 104470014 to 104507849 37835 - protein coding gene tripartite motif-containing 30D
Tssr2356 7 104472048 to 104472059 11 - TSS region transcription start site region 2356
Gm16464 7 104501055 to 104502149 1094 - pseudogene predicted gene 16464
Cpgi19529 7 104501946 to 104502394 448 CpG island CpG island 19529
Tssr74028 7 104507812 to 104507836 24 - TSS region transcription start site region 74028
Tssr2357 7 104513646 to 104513649 3 + TSS region transcription start site region 2357
Gm6574 7 104528734 to 104529095 361 - pseudogene predicted gene 6574
Trim30e-ps1 7 104532959 to 104535361 2402 - pseudogene tripartite motif-containing 30E, pseudogene 1
Olfr651 7 104552884 to 104553952 1068 + protein coding gene olfactory receptor 651
Olfr652 7 104564152 to 104565212 1060 + protein coding gene olfactory receptor 652
Olfr653 7 104579624 to 104580669 1045 + protein coding gene olfactory receptor 653
Rbcwd1 7 104585210 to 104585210 0 QTL red blood cell width distribution 1
Olfr654 7 104587755 to 104588780 1025 + protein coding gene olfactory receptor 654
Olfr655 7 104596253 to 104597179 926 - protein coding gene olfactory receptor 655
Olfr656 7 104617657 to 104618646 989 + protein coding gene olfactory receptor 656
Gm29706 7 104634113 to 104634618 505 - pseudogene predicted gene, 29706
Gm18411 7 104634636 to 104635219 583 + pseudogene predicted gene, 18411
Olfr657 7 104635676 to 104636635 959 + protein coding gene olfactory receptor 657
Olfr658 7 104642880 to 104647305 4425 - protein coding gene olfactory receptor 658
Cpgi19530 7 104647100 to 104647323 223 CpG island CpG island 19530
Usp17le-ps 7 104652252 to 104653208 956 + pseudogene ubiquitin specific peptidase 17-like E, pseudogene
Olfr659 7 104670704 to 104671672 968 + protein coding gene olfactory receptor 659
Olfr660-ps1 7 104678718 to 104679091 373 + pseudogene olfactory receptor 660, pseudogene 1
Olfr661 7 104688017 to 104688976 959 + protein coding gene olfactory receptor 661
Gm6593 7 104692301 to 104693399 1098 - pseudogene predicted gene 6593
Olfr662-ps1 7 104700212 to 104700565 353 + pseudogene olfactory receptor 662, pseudogene 1
Olfr663 7 104703569 to 104704527 958 + polymorphic pseudogene olfactory receptor 663
Olfr664 7 104733385 to 104734350 965 - polymorphic pseudogene olfactory receptor 664
Usp17le 7 104768049 to 104777470 9421 - protein coding gene ubiquitin specific peptidase 17-like E
Gm4887 7 104821204 to 104822256 1052 + pseudogene predicted gene 4887
Usp17lb 7 104840257 to 104842597 2340 - protein coding gene ubiquitin specific peptidase 17-like B
Tssr74029 7 104842581 to 104842585 4 - TSS region transcription start site region 74029
Usp17la 7 104857016 to 104862667 5651 + protein coding gene ubiquitin specific peptidase 17-like A
Gm45556 7 104867993 to 104871766 3773 + lincRNA gene predicted gene 45556
Olfr665 7 104880709 to 104881659 950 + protein coding gene olfactory receptor 665
Olfr666 7 104892670 to 104893626 956 - protein coding gene olfactory receptor 666
Gm45272 7 104908754 to 104913339 4585 + lincRNA gene predicted gene 45272
Gm45275 7 104911013 to 104911377 364 + pseudogene predicted gene 45275
Olfr667 7 104916314 to 104917294 980 - protein coding gene olfactory receptor 667
Olfr668 7 104924806 to 104925762 956 - protein coding gene olfactory receptor 668
Olfr669 7 104938528 to 104939481 953 + protein coding gene olfactory receptor 669
Gm45273 7 104942970 to 104943250 280 + pseudogene predicted gene 45273
Gm5900 7 104949915 to 104950289 374 - pseudogene predicted pseudogene 5900
Olfr670 7 104959792 to 104960730 938 - protein coding gene olfactory receptor 670
Olfr671 7 104972476 to 104975995 3519 - protein coding gene olfactory receptor 671
Olfr672 7 104995964 to 104996902 938 - protein coding gene olfactory receptor 672
Olfr673-ps1 7 105004219 to 105004629 410 - pseudogene olfactory receptor 673, pseudogene 1
Olfr674-ps1 7 105006313 to 105007186 873 - pseudogene olfactory receptor 674, pseudogene 1
Olfr675 7 105024025 to 105024966 941 - protein coding gene olfactory receptor 675
Olfr676 7 105031567 to 105036153 4586 + protein coding gene olfactory receptor 676
Olfr677 7 105056248 to 105057186 938 + protein coding gene olfactory receptor 677
Gm8913 7 105060231 to 105060871 640 + pseudogene predicted gene 8913
Olfr678 7 105069469 to 105070410 941 + protein coding gene olfactory receptor 678
Gm17989 7 105076918 to 105078183 1265 + pseudogene predicted gene, 17989
Gm45557 7 105078430 to 105080080 1650 - lincRNA gene predicted gene 45557
Olfr679 7 105085718 to 105086665 947 + protein coding gene olfactory receptor 679
Olfr680-ps1 7 105090702 to 105091394 692 - pseudogene olfactory receptor 680, pseudogene 1
Gm17990 7 105106030 to 105107821 1791 + pseudogene predicted gene, 17990
Gm45558 7 105108305 to 105110199 1894 - lincRNA gene predicted gene 45558
Olfr681 7 105121459 to 105122406 947 + protein coding gene olfactory receptor 681
Olfr682-ps1 7 105126366 to 105127062 696 - polymorphic pseudogene olfactory receptor 682, pseudogene 1
Olfr683 7 105143350 to 105144309 959 - protein coding gene olfactory receptor 683
Gm45374 7 105145412 to 105145547 135 - pseudogene predicted gene 45374
Olfr684 7 105156742 to 105157680 938 - protein coding gene olfactory receptor 684
Olfr685 7 105180361 to 105181311 950 - protein coding gene olfactory receptor 685
Olfr686 7 105203388 to 105204341 953 - protein coding gene olfactory receptor 686
Tssr68373 7 105226185 to 105226203 18 + TSS region transcription start site region 68373
D7Mit125 7 105229821 to 105229940 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 125
Cpgi19531 7 105229970 to 105230187 217 CpG island CpG island 19531
Olfr687 7 105272852 to 105276431 3579 + protein coding gene olfactory receptor 687
Olfr688 7 105288095 to 105289060 965 + protein coding gene olfactory receptor 688
Olfr689 7 105314006 to 105314968 962 + protein coding gene olfactory receptor 689
Gm45331 7 105326661 to 105327214 553 + pseudogene predicted gene 45331
Olfr690 7 105329217 to 105330278 1061 - protein coding gene olfactory receptor 690
Olfr691 7 105336746 to 105337714 968 - protein coding gene olfactory receptor 691
Olfr692 7 105368328 to 105369317 989 + protein coding gene olfactory receptor 692
Fam160a2 7 105371211 to 105400054 28843 - protein coding gene family with sequence similarity 160, member A2
Tssr68374 7 105375025 to 105375044 19 + TSS region transcription start site region 68374
Tssr68375 7 105375053 to 105375072 19 + TSS region transcription start site region 68375
Gm5901 7 105375095 to 105378377 3282 + protein coding gene predicted gene 5901
Tssr74030 7 105395558 to 105395577 19 - TSS region transcription start site region 74030
Tssr74031 7 105395781 to 105395801 20 - TSS region transcription start site region 74031
Tssr74032 7 105396179 to 105396185 6 - TSS region transcription start site region 74032
Tssr74033 7 105396212 to 105396224 12 - TSS region transcription start site region 74033
Tssr74034 7 105396231 to 105396242 11 - TSS region transcription start site region 74034
Cpgi19532 7 105399405 to 105400741 1336 CpG island CpG island 19532
Tssr74035 7 105399965 to 105399982 17 - TSS region transcription start site region 74035
Tssr74036 7 105399991 to 105400023 32 - TSS region transcription start site region 74036
Gm45885 7 105400314 to 105401892 1578 + bidirectional promoter lncRNA gene predicted gene 45885
Cnga4 7 105404568 to 105408742 4174 + protein coding gene cyclic nucleotide gated channel alpha 4
Cpgi19533 7 105405521 to 105406005 484 CpG island CpG island 19533
Gm4972 7 105412720 to 105413973 1253 - pseudogene predicted gene 4972
Cpgi19534 7 105425401 to 105426246 845 CpG island CpG island 19534
Cckbr 7 105425559 to 105436339 10780 + protein coding gene cholecystokinin B receptor
Tssr68376 7 105425934 to 105426002 68 + TSS region transcription start site region 68376
Cpgi19535 7 105433644 to 105434219 575 CpG island CpG island 19535
Cpgi19536 7 105434518 to 105435443 925 CpG island CpG island 19536
Cavin3 7 105480616 to 105482197 1581 - protein coding gene caveolae associated 3
Tssr68377 7 105480953 to 105480999 46 + TSS region transcription start site region 68377
Cpgi19537 7 105481529 to 105482382 853 CpG island CpG island 19537
Tssr74037 7 105481853 to 105481904 51 - TSS region transcription start site region 74037
Tssr74038 7 105481925 to 105481940 15 - TSS region transcription start site region 74038
Gm45667 7 105481927 to 105483242 1315 + unclassified gene predicted gene 45667
Tssr74039 7 105481953 to 105481964 11 - TSS region transcription start site region 74039
Tssr74040 7 105482200 to 105482216 16 - TSS region transcription start site region 74040
Gm36847 7 105482644 to 105522672 40028 + lncRNA gene predicted gene, 36847
Gm39063 7 105544901 to 105554275 9374 - lncRNA gene predicted gene, 39063
Cpgi19538 7 105554086 to 105554478 392 CpG island CpG island 19538
Smpd1 7 105554360 to 105558389 4029 + protein coding gene sphingomyelin phosphodiesterase 1, acid lysosomal
Tssr68378 7 105554378 to 105554487 109 + TSS region transcription start site region 68378
Tssr68379 7 105554499 to 105554514 15 + TSS region transcription start site region 68379
Apbb1 7 105558483 to 105581653 23170 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1
Tssr74041 7 105565475 to 105565489 14 - TSS region transcription start site region 74041
Tssr74042 7 105565500 to 105565523 23 - TSS region transcription start site region 74042
Tssr74043 7 105565571 to 105565589 18 - TSS region transcription start site region 74043
Tssr74044 7 105568646 to 105568675 29 - TSS region transcription start site region 74044
Tssr74045 7 105569282 to 105569315 33 - TSS region transcription start site region 74045
Tssr68380 7 105569379 to 105569393 14 + TSS region transcription start site region 68380
Tssr74046 7 105574324 to 105574329 5 - TSS region transcription start site region 74046
Cpgi19539 7 105580623 to 105581726 1103 CpG island CpG island 19539
Tssr74047 7 105581200 to 105581271 71 - TSS region transcription start site region 74047
Tssr74048 7 105581272 to 105581283 11 - TSS region transcription start site region 74048
Tssr74049 7 105581501 to 105581569 68 - TSS region transcription start site region 74049
Tssr74050 7 105581598 to 105581614 16 - TSS region transcription start site region 74050
Hpx 7 105591611 to 105600116 8505 - protein coding gene hemopexin
Tssr74051 7 105591686 to 105591697 11 - TSS region transcription start site region 74051
Tssr74052 7 105591774 to 105591821 47 - TSS region transcription start site region 74052
Tssr74053 7 105591836 to 105591863 27 - TSS region transcription start site region 74053
Tssr74054 7 105592180 to 105592213 33 - TSS region transcription start site region 74054
Tssr74055 7 105592358 to 105592383 25 - TSS region transcription start site region 74055
Tssr74056 7 105592384 to 105592428 44 - TSS region transcription start site region 74056
Tssr74057 7 105592436 to 105592466 30 - TSS region transcription start site region 74057
Tssr74058 7 105595104 to 105595207 103 - TSS region transcription start site region 74058
Tssr74059 7 105595529 to 105595539 10 - TSS region transcription start site region 74059
Tssr74060 7 105595540 to 105595547 7 - TSS region transcription start site region 74060
Tssr74061 7 105595569 to 105595595 26 - TSS region transcription start site region 74061
Tssr74062 7 105595607 to 105595619 12 - TSS region transcription start site region 74062
Tssr74063 7 105595620 to 105595629 9 - TSS region transcription start site region 74063
Tssr74064 7 105595645 to 105595656 11 - TSS region transcription start site region 74064
Tssr74065 7 105595672 to 105595682 10 - TSS region transcription start site region 74065
Tssr68381 7 105596278 to 105596306 28 + TSS region transcription start site region 68381
Tssr74066 7 105596323 to 105596355 32 - TSS region transcription start site region 74066
Tssr74067 7 105596362 to 105596367 5 - TSS region transcription start site region 74067
Tssr74068 7 105596373 to 105596380 7 - TSS region transcription start site region 74068
Tssr74069 7 105596415 to 105596425 10 - TSS region transcription start site region 74069
Tssr74070 7 105598815 to 105598819 4 - TSS region transcription start site region 74070
Tssr74071 7 105599286 to 105599291 5 - TSS region transcription start site region 74071
Tssr74072 7 105599296 to 105599329 33 - TSS region transcription start site region 74072
Tssr74073 7 105599332 to 105599346 14 - TSS region transcription start site region 74073
Tssr74074 7 105599353 to 105599380 27 - TSS region transcription start site region 74074
Tssr74075 7 105599697 to 105599715 18 - TSS region transcription start site region 74075
Tssr74076 7 105599716 to 105599743 27 - TSS region transcription start site region 74076
Tssr74077 7 105600103 to 105600123 20 - TSS region transcription start site region 74077
Trim3 7 105604463 to 105633571 29108 - protein coding gene tripartite motif-containing 3
Tssr74078 7 105610914 to 105610931 17 - TSS region transcription start site region 74078
Gm45632 7 105622817 to 105624704 1887 - unclassified gene predicted gene 45632
Cpgi19540 7 105632934 to 105633998 1064 CpG island CpG island 19540
Tssr74079 7 105633433 to 105633442 9 - TSS region transcription start site region 74079
Tssr74080 7 105633460 to 105633477 17 - TSS region transcription start site region 74080
Tssr74081 7 105633479 to 105633521 42 - TSS region transcription start site region 74081
Tssr74082 7 105633525 to 105633601 76 - TSS region transcription start site region 74082
Arfip2 7 105634203 to 105640416 6213 - protein coding gene ADP-ribosylation factor interacting protein 2
Timm10b 7 105640056 to 105643637 3581 + protein coding gene translocase of inner mitochondrial membrane 10B
Cpgi19541 7 105640084 to 105641221 1137 CpG island CpG island 19541
Tssr74083 7 105640317 to 105640370 53 - TSS region transcription start site region 74083
Tssr2358 7 105640416 to 105640421 5 + TSS region transcription start site region 2358
Tssr68382 7 105640463 to 105640514 51 + TSS region transcription start site region 68382
Tssr68383 7 105640522 to 105640586 64 + TSS region transcription start site region 68383
Gm45799 7 105640552 to 105684439 43887 + protein coding gene predicted gene 45799
Tssr68384 7 105640783 to 105640809 26 + TSS region transcription start site region 68384
Tssr68385 7 105640996 to 105641027 31 + TSS region transcription start site region 68385
Tssr68386 7 105641052 to 105641070 18 + TSS region transcription start site region 68386
Tssr68387 7 105642337 to 105642342 5 + TSS region transcription start site region 68387
Gm22504 7 105642338 to 105642476 138 - snoRNA gene predicted gene, 22504
Tssr68388 7 105642615 to 105642622 7 + TSS region transcription start site region 68388
Tssr68389 7 105648203 to 105648206 3 + TSS region transcription start site region 68389
Tssr68390 7 105650769 to 105650798 29 + TSS region transcription start site region 68390
Tssr68391 7 105650813 to 105650833 20 + TSS region transcription start site region 68391
Dnhd1 7 105650827 to 105721799 70972 + protein coding gene dynein heavy chain domain 1
Mrps36-ps2 7 105690259 to 105690567 308 - pseudogene mitochondrial ribosomal protein S36, pseudogene 2
Rrp8 7 105731730 to 105737385 5655 - protein coding gene ribosomal RNA processing 8, methyltransferase, homolog (yeast)
Cpgi19542 7 105736100 to 105737398 1298 CpG island CpG island 19542
Tssr74084 7 105736390 to 105736404 14 - TSS region transcription start site region 74084
Tssr74085 7 105736426 to 105736441 15 - TSS region transcription start site region 74085
Tssr74086 7 105736447 to 105736488 41 - TSS region transcription start site region 74086
Tssr74087 7 105736490 to 105736534 44 - TSS region transcription start site region 74087