Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:104226157-104492694

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim6 7 104218793 to 104235152 16359 + protein coding gene tripartite motif-containing 6
Tssr68362 7 104244449 to 104244460 11 + TSS region transcription start site region 68362
Trim34a 7 104244457 to 104262234 17777 + protein coding gene tripartite motif-containing 34A
Tssr68363 7 104244465 to 104244491 26 + TSS region transcription start site region 68363
Tssr68364 7 104244496 to 104244552 56 + TSS region transcription start site region 68364
Tssr68365 7 104244786 to 104244791 5 + TSS region transcription start site region 68365
Tssr68366 7 104250303 to 104250306 3 + TSS region transcription start site region 68366
Gm47248 7 104261465 to 104262174 709 - antisense lncRNA gene predicted gene, 47248
Trim5 7 104263386 to 104288094 24708 - protein coding gene tripartite motif-containing 5
Gm24846 7 104264683 to 104264790 107 - snRNA gene predicted gene, 24846
D7Mit217a 7 104284550 to 104284642 92 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217a
Tssr68367 7 104291836 to 104291843 7 + TSS region transcription start site region 68367
Trim12a 7 104299894 to 104315466 15572 - protein coding gene tripartite motif-containing 12A
Tssr73984 7 104307142 to 104307146 4 - TSS region transcription start site region 73984
Tssr68368 7 104314987 to 104315011 24 + TSS region transcription start site region 68368
Gm15133 7 104315031 to 104324838 9807 + antisense lncRNA gene predicted gene 15133
Gm17788 7 104319071 to 104320177 1106 - pseudogene predicted gene, 17788
Trim34b 7 104329471 to 104336617 7146 + protein coding gene tripartite motif-containing 34B
Tssr68369 7 104332098 to 104332110 12 + TSS region transcription start site region 68369
Tssr68370 7 104332132 to 104332135 3 + TSS region transcription start site region 68370
Tssr68371 7 104333314 to 104333321 7 + TSS region transcription start site region 68371
Trim12c 7 104338754 to 104353358 14604 - protein coding gene tripartite motif-containing 12C
Gm27995 7 104340090 to 104340189 99 - snRNA gene predicted gene, 27995
D7Mit217b 7 104349896 to 104349968 72 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217b
Gm36430 7 104351817 to 104355748 3931 + lncRNA gene predicted gene, 36430
Tssr73985 7 104353328 to 104353394 66 - TSS region transcription start site region 73985
Gm38525 7 104355396 to 104369881 14485 - protein coding gene predicted gene, 38525
Trim30b 7 104355398 to 104358646 3248 - protein coding gene tripartite motif-containing 30B
Gm45997 7 104356157 to 104362694 6537 + lncRNA gene predicted gene, 45997
Tssr73986 7 104369826 to 104369837 11 - TSS region transcription start site region 73986
Tssr73987 7 104369838 to 104369876 38 - TSS region transcription start site region 73987
Tssr73988 7 104369884 to 104369896 12 - TSS region transcription start site region 73988
Tssr73989 7 104379627 to 104379640 13 - TSS region transcription start site region 73989
Tssr73990 7 104379938 to 104379945 7 - TSS region transcription start site region 73990
Tssr73991 7 104380005 to 104380020 15 - TSS region transcription start site region 73991
Tssr73992 7 104380098 to 104380100 2 - TSS region transcription start site region 73992
Tssr73993 7 104380136 to 104380178 42 - TSS region transcription start site region 73993
Tssr73994 7 104380552 to 104380587 35 - TSS region transcription start site region 73994
Tssr73995 7 104380665 to 104380696 31 - TSS region transcription start site region 73995
Tssr73996 7 104380719 to 104380733 14 - TSS region transcription start site region 73996
Tssr73997 7 104381143 to 104381154 11 - TSS region transcription start site region 73997
Trim30c 7 104382065 to 104400837 18772 - protein coding gene tripartite motif-containing 30C
D7Mit220 7 104394725 to 104394859 134 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220
Hbbcq4 7 104394725 to 104394859 134 QTL hemoglobin concentration QTL 4
Heal6 7 104394725 to 104394859 134 QTL wound healing/regeneration 6
Stheal6 7 104394725 to 104394859 134 QTL soft tissue heal 6
D7Mit220.1 7 104394846 to 104394961 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220.1
Tssr73998 7 104395168 to 104395177 9 - TSS region transcription start site region 73998
Tssr73999 7 104395212 to 104395222 10 - TSS region transcription start site region 73999
Tssr74000 7 104400713 to 104400718 5 - TSS region transcription start site region 74000
Tssr74001 7 104400727 to 104400739 12 - TSS region transcription start site region 74001
Tssr74002 7 104400764 to 104400786 22 - TSS region transcription start site region 74002
Tssr74003 7 104400793 to 104400802 9 - TSS region transcription start site region 74003
Tssr74004 7 104400820 to 104400861 41 - TSS region transcription start site region 74004
Tssr74005 7 104400869 to 104400880 11 - TSS region transcription start site region 74005
Tssr74006 7 104404566 to 104404579 13 - TSS region transcription start site region 74006
Gm45471 7 104405404 to 104406525 1121 - pseudogene predicted gene 45471
Trim30a 7 104409025 to 104465193 56168 - protein coding gene tripartite motif-containing 30A
Tssr74007 7 104409436 to 104409450 14 - TSS region transcription start site region 74007
Tssr74008 7 104409528 to 104409539 11 - TSS region transcription start site region 74008
Tssr74009 7 104409821 to 104409851 30 - TSS region transcription start site region 74009
Tssr74010 7 104410014 to 104410027 13 - TSS region transcription start site region 74010
Tssr74011 7 104410155 to 104410183 28 - TSS region transcription start site region 74011
Tssr74012 7 104410224 to 104410241 17 - TSS region transcription start site region 74012
Tssr74013 7 104411075 to 104411095 20 - TSS region transcription start site region 74013
Tssr74014 7 104411099 to 104411110 11 - TSS region transcription start site region 74014
Tssr74015 7 104412297 to 104412320 23 - TSS region transcription start site region 74015
Tssr74016 7 104420774 to 104420812 38 - TSS region transcription start site region 74016
Gm25405 7 104423274 to 104423380 106 + snRNA gene predicted gene, 25405
Tssr74017 7 104428485 to 104428497 12 - TSS region transcription start site region 74017
Tssr74018 7 104428534 to 104428545 11 - TSS region transcription start site region 74018
Tssr74019 7 104434753 to 104434784 31 - TSS region transcription start site region 74019
Tssr74020 7 104435716 to 104435735 19 - TSS region transcription start site region 74020
Tssr74021 7 104439292 to 104439307 15 - TSS region transcription start site region 74021
Tssr74022 7 104441390 to 104441423 33 - TSS region transcription start site region 74022
Tssr74023 7 104446047 to 104446060 13 - TSS region transcription start site region 74023
Tssr74024 7 104446070 to 104446103 33 - TSS region transcription start site region 74024
Tssr74025 7 104463630 to 104463676 46 - TSS region transcription start site region 74025
Tssr74026 7 104465141 to 104465175 34 - TSS region transcription start site region 74026
Tssr74027 7 104465177 to 104465188 11 - TSS region transcription start site region 74027
Tssr68372 7 104465673 to 104465686 13 + TSS region transcription start site region 68372
Trim30d 7 104470014 to 104507849 37835 - protein coding gene tripartite motif-containing 30D
Tssr2356 7 104472048 to 104472059 11 - TSS region transcription start site region 2356