Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:104186781-107538327

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454 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr649 7 104189267 to 104190205 938 - protein coding gene olfactory receptor 649
Olfr650-ps1 7 104206029 to 104207006 977 + polymorphic pseudogene olfactory receptor 650, pseudogene 1
Tssr68358 7 104218787 to 104218826 39 + TSS region transcription start site region 68358
Trim6 7 104218793 to 104235152 16359 + protein coding gene tripartite motif-containing 6
Tssr68359 7 104218827 to 104218849 22 + TSS region transcription start site region 68359
Tssr68360 7 104218901 to 104218912 11 + TSS region transcription start site region 68360
Tssr68361 7 104219404 to 104219410 6 + TSS region transcription start site region 68361
Gm8667 7 104222333 to 104222781 448 - pseudogene predicted gene 8667
Tssr68362 7 104244449 to 104244460 11 + TSS region transcription start site region 68362
Trim34a 7 104244457 to 104262234 17777 + protein coding gene tripartite motif-containing 34A
Tssr68363 7 104244465 to 104244491 26 + TSS region transcription start site region 68363
Tssr68364 7 104244496 to 104244552 56 + TSS region transcription start site region 68364
Tssr68365 7 104244786 to 104244791 5 + TSS region transcription start site region 68365
Tssr68366 7 104250303 to 104250306 3 + TSS region transcription start site region 68366
Gm47248 7 104261465 to 104262174 709 - antisense lncRNA gene predicted gene, 47248
Trim5 7 104263386 to 104288094 24708 - protein coding gene tripartite motif-containing 5
Gm24846 7 104264683 to 104264790 107 - snRNA gene predicted gene, 24846
D7Mit217a 7 104284550 to 104284642 92 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217a
Tssr68367 7 104291836 to 104291843 7 + TSS region transcription start site region 68367
Trim12a 7 104299894 to 104315466 15572 - protein coding gene tripartite motif-containing 12A
Tssr73984 7 104307142 to 104307146 4 - TSS region transcription start site region 73984
Tssr68368 7 104314987 to 104315011 24 + TSS region transcription start site region 68368
Gm15133 7 104315031 to 104324838 9807 + antisense lncRNA gene predicted gene 15133
Gm17788 7 104319071 to 104320177 1106 - pseudogene predicted gene, 17788
Trim34b 7 104329471 to 104336617 7146 + protein coding gene tripartite motif-containing 34B
Tssr68369 7 104332098 to 104332110 12 + TSS region transcription start site region 68369
Tssr68370 7 104332132 to 104332135 3 + TSS region transcription start site region 68370
Tssr68371 7 104333314 to 104333321 7 + TSS region transcription start site region 68371
Trim12c 7 104338754 to 104353358 14604 - protein coding gene tripartite motif-containing 12C
Gm27995 7 104340090 to 104340189 99 - snRNA gene predicted gene, 27995
D7Mit217b 7 104349896 to 104349968 72 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217b
Gm36430 7 104351817 to 104355748 3931 + lncRNA gene predicted gene, 36430
Tssr73985 7 104353328 to 104353394 66 - TSS region transcription start site region 73985
Gm38525 7 104355396 to 104369881 14485 - protein coding gene predicted gene, 38525
Trim30b 7 104355398 to 104358646 3248 - protein coding gene tripartite motif-containing 30B
Gm45997 7 104356157 to 104362694 6537 + lncRNA gene predicted gene, 45997
Tssr73986 7 104369826 to 104369837 11 - TSS region transcription start site region 73986
Tssr73987 7 104369838 to 104369876 38 - TSS region transcription start site region 73987
Tssr73988 7 104369884 to 104369896 12 - TSS region transcription start site region 73988
Tssr73989 7 104379627 to 104379640 13 - TSS region transcription start site region 73989
Tssr73990 7 104379938 to 104379945 7 - TSS region transcription start site region 73990
Tssr73991 7 104380005 to 104380020 15 - TSS region transcription start site region 73991
Tssr73992 7 104380098 to 104380100 2 - TSS region transcription start site region 73992
Tssr73993 7 104380136 to 104380178 42 - TSS region transcription start site region 73993
Tssr73994 7 104380552 to 104380587 35 - TSS region transcription start site region 73994
Tssr73995 7 104380665 to 104380696 31 - TSS region transcription start site region 73995
Tssr73996 7 104380719 to 104380733 14 - TSS region transcription start site region 73996
Tssr73997 7 104381143 to 104381154 11 - TSS region transcription start site region 73997
Trim30c 7 104382065 to 104400837 18772 - protein coding gene tripartite motif-containing 30C
Stheal6 7 104394725 to 104394859 134 QTL soft tissue heal 6
Heal6 7 104394725 to 104394859 134 QTL wound healing/regeneration 6
Hbbcq4 7 104394725 to 104394859 134 QTL hemoglobin concentration QTL 4
D7Mit220 7 104394725 to 104394859 134 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220
D7Mit220.1 7 104394846 to 104394961 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220.1
Tssr73998 7 104395168 to 104395177 9 - TSS region transcription start site region 73998
Tssr73999 7 104395212 to 104395222 10 - TSS region transcription start site region 73999
Tssr74000 7 104400713 to 104400718 5 - TSS region transcription start site region 74000
Tssr74001 7 104400727 to 104400739 12 - TSS region transcription start site region 74001
Tssr74002 7 104400764 to 104400786 22 - TSS region transcription start site region 74002
Tssr74003 7 104400793 to 104400802 9 - TSS region transcription start site region 74003
Tssr74004 7 104400820 to 104400861 41 - TSS region transcription start site region 74004
Tssr74005 7 104400869 to 104400880 11 - TSS region transcription start site region 74005
Tssr74006 7 104404566 to 104404579 13 - TSS region transcription start site region 74006
Gm45471 7 104405404 to 104406525 1121 - pseudogene predicted gene 45471
Trim30a 7 104409025 to 104465193 56168 - protein coding gene tripartite motif-containing 30A
Tssr74007 7 104409436 to 104409450 14 - TSS region transcription start site region 74007
Tssr74008 7 104409528 to 104409539 11 - TSS region transcription start site region 74008
Tssr74009 7 104409821 to 104409851 30 - TSS region transcription start site region 74009
Tssr74010 7 104410014 to 104410027 13 - TSS region transcription start site region 74010
Tssr74011 7 104410155 to 104410183 28 - TSS region transcription start site region 74011
Tssr74012 7 104410224 to 104410241 17 - TSS region transcription start site region 74012
Tssr74013 7 104411075 to 104411095 20 - TSS region transcription start site region 74013
Tssr74014 7 104411099 to 104411110 11 - TSS region transcription start site region 74014
Tssr74015 7 104412297 to 104412320 23 - TSS region transcription start site region 74015
Tssr74016 7 104420774 to 104420812 38 - TSS region transcription start site region 74016
Gm25405 7 104423274 to 104423380 106 + snRNA gene predicted gene, 25405
Tssr74017 7 104428485 to 104428497 12 - TSS region transcription start site region 74017
Tssr74018 7 104428534 to 104428545 11 - TSS region transcription start site region 74018
Tssr74019 7 104434753 to 104434784 31 - TSS region transcription start site region 74019
Tssr74020 7 104435716 to 104435735 19 - TSS region transcription start site region 74020
Tssr74021 7 104439292 to 104439307 15 - TSS region transcription start site region 74021
Tssr74022 7 104441390 to 104441423 33 - TSS region transcription start site region 74022
Tssr74023 7 104446047 to 104446060 13 - TSS region transcription start site region 74023
Tssr74024 7 104446070 to 104446103 33 - TSS region transcription start site region 74024
Tssr74025 7 104463630 to 104463676 46 - TSS region transcription start site region 74025
Tssr74026 7 104465141 to 104465175 34 - TSS region transcription start site region 74026
Tssr74027 7 104465177 to 104465188 11 - TSS region transcription start site region 74027
Tssr68372 7 104465673 to 104465686 13 + TSS region transcription start site region 68372
Trim30d 7 104470014 to 104507849 37835 - protein coding gene tripartite motif-containing 30D
Tssr2356 7 104472048 to 104472059 11 - TSS region transcription start site region 2356
Gm16464 7 104501055 to 104502149 1094 - pseudogene predicted gene 16464
Cpgi19529 7 104501946 to 104502394 448 CpG island CpG island 19529
Tssr74028 7 104507812 to 104507836 24 - TSS region transcription start site region 74028
Tssr2357 7 104513646 to 104513649 3 + TSS region transcription start site region 2357
Gm6574 7 104528734 to 104529095 361 - pseudogene predicted gene 6574
Trim30e-ps1 7 104532959 to 104535361 2402 - pseudogene tripartite motif-containing 30E, pseudogene 1
Olfr651 7 104552884 to 104553952 1068 + protein coding gene olfactory receptor 651
Olfr652 7 104564152 to 104565212 1060 + protein coding gene olfactory receptor 652
Olfr653 7 104579624 to 104580669 1045 + protein coding gene olfactory receptor 653
Rbcwd1 7 104585210 to 104585210 0 QTL red blood cell width distribution 1
Olfr654 7 104587755 to 104588780 1025 + protein coding gene olfactory receptor 654
Olfr655 7 104596253 to 104597179 926 - protein coding gene olfactory receptor 655
Olfr656 7 104617657 to 104618646 989 + protein coding gene olfactory receptor 656
Gm29706 7 104634113 to 104634618 505 - pseudogene predicted gene, 29706
Gm18411 7 104634636 to 104635219 583 + pseudogene predicted gene, 18411
Olfr657 7 104635676 to 104636635 959 + protein coding gene olfactory receptor 657
Olfr658 7 104642880 to 104647305 4425 - protein coding gene olfactory receptor 658
Cpgi19530 7 104647100 to 104647323 223 CpG island CpG island 19530
Usp17le-ps 7 104652252 to 104653208 956 + pseudogene ubiquitin specific peptidase 17-like E, pseudogene
Olfr659 7 104670704 to 104671672 968 + protein coding gene olfactory receptor 659
Olfr660-ps1 7 104678718 to 104679091 373 + pseudogene olfactory receptor 660, pseudogene 1
Olfr661 7 104688017 to 104688976 959 + protein coding gene olfactory receptor 661
Gm6593 7 104692301 to 104693399 1098 - pseudogene predicted gene 6593
Olfr662-ps1 7 104700212 to 104700565 353 + pseudogene olfactory receptor 662, pseudogene 1
Olfr663 7 104703569 to 104704527 958 + polymorphic pseudogene olfactory receptor 663
Olfr664 7 104733385 to 104734350 965 - polymorphic pseudogene olfactory receptor 664
Usp17le 7 104768049 to 104777470 9421 - protein coding gene ubiquitin specific peptidase 17-like E
Gm4887 7 104821204 to 104822256 1052 + pseudogene predicted gene 4887
Usp17lb 7 104840257 to 104842597 2340 - protein coding gene ubiquitin specific peptidase 17-like B
Tssr74029 7 104842581 to 104842585 4 - TSS region transcription start site region 74029
Usp17la 7 104857016 to 104862667 5651 + protein coding gene ubiquitin specific peptidase 17-like A
Gm45556 7 104867993 to 104871766 3773 + lincRNA gene predicted gene 45556
Olfr665 7 104880709 to 104881659 950 + protein coding gene olfactory receptor 665
Olfr666 7 104892670 to 104893626 956 - protein coding gene olfactory receptor 666
Gm45272 7 104908754 to 104913339 4585 + lincRNA gene predicted gene 45272
Gm45275 7 104911013 to 104911377 364 + pseudogene predicted gene 45275
Olfr667 7 104916314 to 104917294 980 - protein coding gene olfactory receptor 667
Olfr668 7 104924806 to 104925762 956 - protein coding gene olfactory receptor 668
Olfr669 7 104938528 to 104939481 953 + protein coding gene olfactory receptor 669
Gm45273 7 104942970 to 104943250 280 + pseudogene predicted gene 45273
Gm5900 7 104949915 to 104950289 374 - pseudogene predicted pseudogene 5900
Olfr670 7 104959792 to 104960730 938 - protein coding gene olfactory receptor 670
Olfr671 7 104972476 to 104975995 3519 - protein coding gene olfactory receptor 671
Olfr672 7 104995964 to 104996902 938 - protein coding gene olfactory receptor 672
Olfr673-ps1 7 105004219 to 105004629 410 - pseudogene olfactory receptor 673, pseudogene 1
Olfr674-ps1 7 105006313 to 105007186 873 - pseudogene olfactory receptor 674, pseudogene 1
Olfr675 7 105024025 to 105024966 941 - protein coding gene olfactory receptor 675
Olfr676 7 105031567 to 105036153 4586 + protein coding gene olfactory receptor 676
Olfr677 7 105056248 to 105057186 938 + protein coding gene olfactory receptor 677
Gm8913 7 105060231 to 105060871 640 + pseudogene predicted gene 8913
Olfr678 7 105069469 to 105070410 941 + protein coding gene olfactory receptor 678
Gm17989 7 105076918 to 105078183 1265 + pseudogene predicted gene, 17989
Gm45557 7 105078430 to 105080080 1650 - lincRNA gene predicted gene 45557
Olfr679 7 105085718 to 105086665 947 + protein coding gene olfactory receptor 679
Olfr680-ps1 7 105090702 to 105091394 692 - pseudogene olfactory receptor 680, pseudogene 1
Gm17990 7 105106030 to 105107821 1791 + pseudogene predicted gene, 17990
Gm45558 7 105108305 to 105110199 1894 - lincRNA gene predicted gene 45558
Olfr681 7 105121459 to 105122406 947 + protein coding gene olfactory receptor 681
Olfr682-ps1 7 105126366 to 105127062 696 - polymorphic pseudogene olfactory receptor 682, pseudogene 1
Olfr683 7 105143350 to 105144309 959 - protein coding gene olfactory receptor 683
Gm45374 7 105145412 to 105145547 135 - pseudogene predicted gene 45374
Olfr684 7 105156742 to 105157680 938 - protein coding gene olfactory receptor 684
Olfr685 7 105180361 to 105181311 950 - protein coding gene olfactory receptor 685
Olfr686 7 105203388 to 105204341 953 - protein coding gene olfactory receptor 686
Tssr68373 7 105226185 to 105226203 18 + TSS region transcription start site region 68373
D7Mit125 7 105229821 to 105229940 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 125
Cpgi19531 7 105229970 to 105230187 217 CpG island CpG island 19531
Olfr687 7 105272852 to 105276431 3579 + protein coding gene olfactory receptor 687
Olfr688 7 105288095 to 105289060 965 + protein coding gene olfactory receptor 688
Olfr689 7 105314006 to 105314968 962 + protein coding gene olfactory receptor 689
Gm45331 7 105326661 to 105327214 553 + pseudogene predicted gene 45331
Olfr690 7 105329217 to 105330278 1061 - protein coding gene olfactory receptor 690
Olfr691 7 105336746 to 105337714 968 - protein coding gene olfactory receptor 691
Olfr692 7 105368328 to 105369317 989 + protein coding gene olfactory receptor 692
Fam160a2 7 105371211 to 105400054 28843 - protein coding gene family with sequence similarity 160, member A2
Tssr68374 7 105375025 to 105375044 19 + TSS region transcription start site region 68374
Tssr68375 7 105375053 to 105375072 19 + TSS region transcription start site region 68375
Gm5901 7 105375095 to 105378377 3282 + protein coding gene predicted gene 5901
Tssr74030 7 105395558 to 105395577 19 - TSS region transcription start site region 74030
Tssr74031 7 105395781 to 105395801 20 - TSS region transcription start site region 74031
Tssr74032 7 105396179 to 105396185 6 - TSS region transcription start site region 74032
Tssr74033 7 105396212 to 105396224 12 - TSS region transcription start site region 74033
Tssr74034 7 105396231 to 105396242 11 - TSS region transcription start site region 74034
Cpgi19532 7 105399405 to 105400741 1336 CpG island CpG island 19532
Tssr74035 7 105399965 to 105399982 17 - TSS region transcription start site region 74035
Tssr74036 7 105399991 to 105400023 32 - TSS region transcription start site region 74036
Gm45885 7 105400314 to 105401892 1578 + bidirectional promoter lncRNA gene predicted gene 45885
Cnga4 7 105404568 to 105408742 4174 + protein coding gene cyclic nucleotide gated channel alpha 4
Cpgi19533 7 105405521 to 105406005 484 CpG island CpG island 19533
Gm4972 7 105412720 to 105413973 1253 - pseudogene predicted gene 4972
Cpgi19534 7 105425401 to 105426246 845 CpG island CpG island 19534
Cckbr 7 105425559 to 105436339 10780 + protein coding gene cholecystokinin B receptor
Tssr68376 7 105425934 to 105426002 68 + TSS region transcription start site region 68376
Cpgi19535 7 105433644 to 105434219 575 CpG island CpG island 19535
Cpgi19536 7 105434518 to 105435443 925 CpG island CpG island 19536
Cavin3 7 105480616 to 105482197 1581 - protein coding gene caveolae associated 3
Tssr68377 7 105480953 to 105480999 46 + TSS region transcription start site region 68377
Cpgi19537 7 105481529 to 105482382 853 CpG island CpG island 19537
Tssr74037 7 105481853 to 105481904 51 - TSS region transcription start site region 74037
Tssr74038 7 105481925 to 105481940 15 - TSS region transcription start site region 74038
Gm45667 7 105481927 to 105483242 1315 + unclassified gene predicted gene 45667
Tssr74039 7 105481953 to 105481964 11 - TSS region transcription start site region 74039
Tssr74040 7 105482200 to 105482216 16 - TSS region transcription start site region 74040
Gm36847 7 105482644 to 105522672 40028 + lncRNA gene predicted gene, 36847
Gm39063 7 105544901 to 105554275 9374 - lncRNA gene predicted gene, 39063
Cpgi19538 7 105554086 to 105554478 392 CpG island CpG island 19538
Smpd1 7 105554360 to 105558389 4029 + protein coding gene sphingomyelin phosphodiesterase 1, acid lysosomal
Tssr68378 7 105554378 to 105554487 109 + TSS region transcription start site region 68378
Tssr68379 7 105554499 to 105554514 15 + TSS region transcription start site region 68379
Apbb1 7 105558483 to 105581653 23170 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1