Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:103823901-104613912

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168 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hbb-bs 7 103826523 to 103827928 1405 - protein coding gene hemoglobin, beta adult s chain
Tssr68354 7 103826529 to 103826540 11 + TSS region transcription start site region 68354
Tssr73965 7 103826556 to 103826567 11 - TSS region transcription start site region 73965
Tssr73966 7 103826570 to 103826579 9 - TSS region transcription start site region 73966
Tssr73967 7 103826588 to 103826707 119 - TSS region transcription start site region 73967
Tssr68355 7 103826649 to 103826668 19 + TSS region transcription start site region 68355
Tssr73968 7 103827750 to 103827762 12 - TSS region transcription start site region 73968
Tssr73969 7 103827922 to 103827931 9 - TSS region transcription start site region 73969
Gm15115 7 103829636 to 103829899 263 + pseudogene predicted gene 15115
Hbb-bh3 7 103832628 to 103833723 1095 - pseudogene hemoglobin beta, pseudogene bh3
Hbb-bh2 7 103839124 to 103840520 1396 - protein coding gene hemoglobin beta, bh2
Hbb-bh1 7 103841638 to 103843162 1524 - protein coding gene hemoglobin Z, beta-like embryonic chain
Tssr73970 7 103843154 to 103843169 15 - TSS region transcription start site region 73970
Hbb-bh0 7 103850020 to 103850148 128 - pseudogene hemoglobin, beta, pseudogene bh0
D7Mit34 7 103850971 to 103851109 138 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 34
D7Mit33 7 103850971 to 103851122 151 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 33
Elpt 7 103850979 to 103851122 143 QTL elevated leptin
D7Mit1000 7 103850979 to 103851122 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 1000
Hbb-y 7 103851754 to 103853207 1453 - protein coding gene hemoglobin Y, beta-like embryonic chain
Tssr73971 7 103851783 to 103851810 27 - TSS region transcription start site region 73971
Tssr73972 7 103851817 to 103851824 7 - TSS region transcription start site region 73972
Tssr73973 7 103851865 to 103851876 11 - TSS region transcription start site region 73973
Tssr73974 7 103853199 to 103853213 14 - TSS region transcription start site region 73974
D7Mit37 7 103860643 to 103860803 160 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 37
Abbp3 7 103860803 to 40024463 -63836340 QTL A/J and C57BL/6 blood pressure 3
D7Mit131 7 103870606 to 103870726 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 131
Tssr68356 7 103870941 to 103870957 16 + TSS region transcription start site region 68356
Olfr66 7 103881306 to 103882241 935 - protein coding gene olfactory receptor 66
Dnajc19-ps 7 103882654 to 103883004 350 - pseudogene DnaJ heat shock protein family (Hsp40) member C19, pseudogene
Tssr73975 7 103883096 to 103883131 35 - TSS region transcription start site region 73975
Olfr64 7 103892810 to 103894471 1661 - protein coding gene olfactory receptor 64
Olfr65 7 103906342 to 103907447 1105 + protein coding gene olfactory receptor 65
Tssr68357 7 103918957 to 103918958 1 + TSS region transcription start site region 68357
Olfr631 7 103928825 to 103929784 959 + protein coding gene olfactory receptor 631
Olfr632 7 103937382 to 103938335 953 + protein coding gene olfactory receptor 632
Gm45655 7 103939754 to 103939913 159 + pseudogene predicted gene 45655
Olfr633 7 103946568 to 103947506 938 + protein coding gene olfactory receptor 633
Olfr634-ps1 7 103956412 to 103957363 951 + polymorphic pseudogene olfactory receptor 634, pseudogene 1
Gm4886 7 103973358 to 103974254 896 - pseudogene predicted gene 4886
Olfr635 7 103979176 to 103980141 965 + protein coding gene olfactory receptor 635
Olfr636-ps1 7 103989102 to 103990036 934 - pseudogene olfactory receptor 636, pseudogene 1
Olfr637-ps1 7 103995991 to 103996461 470 + pseudogene olfactory receptor 637, pseudogene 1
Olfr638 7 104003259 to 104004224 965 + protein coding gene olfactory receptor 638
Olfr639 7 104011750 to 104012700 950 - protein coding gene olfactory receptor 639
Olfr640 7 104021372 to 104022316 944 - protein coding gene olfactory receptor 640
Olfr641 7 104039798 to 104040736 938 + protein coding gene olfactory receptor 641
Olfr642 7 104049408 to 104050352 944 - protein coding gene olfactory receptor 642
4930516K23Rik 7 104053600 to 104061445 7845 - protein coding gene RIKEN cDNA 4930516K23 gene
Olfr643 7 104058656 to 104059600 944 - protein coding gene olfactory receptor 643
Olfr644 7 104068085 to 104069029 944 - protein coding gene olfactory receptor 644
Olfr645 7 104084131 to 104085078 947 - protein coding gene olfactory receptor 645
Olfr646 7 104104873 to 104109766 4893 + protein coding gene olfactory receptor 646
Ubqln5 7 104127913 to 104129823 1910 - protein coding gene ubiquilin 5
Tssr73976 7 104129786 to 104129788 2 - TSS region transcription start site region 73976
Tssr73977 7 104129792 to 104129819 27 - TSS region transcription start site region 73977
Ubqln3 7 104140623 to 104143279 2656 - protein coding gene ubiquilin 3
Tssr73978 7 104143243 to 104143246 3 - TSS region transcription start site region 73978
Tssr73979 7 104143257 to 104143306 49 - TSS region transcription start site region 73979
Ubqlnl 7 104148259 to 104150556 2297 - protein coding gene ubiquilin-like
Tssr73980 7 104149418 to 104149421 3 - TSS region transcription start site region 73980
Tssr73981 7 104150518 to 104150525 7 - TSS region transcription start site region 73981
Tssr73982 7 104150540 to 104150561 21 - TSS region transcription start site region 73982
Olfm5 7 104153013 to 104164816 11803 - protein coding gene olfactomedin 5
Tssr73983 7 104164829 to 104164832 3 - TSS region transcription start site region 73983
Olfr647-ps1 7 104167383 to 104168342 959 - pseudogene olfactory receptor 647, pseudogene 1
Olfr648 7 104179456 to 104180406 950 - protein coding gene olfactory receptor 648
Olfr649 7 104189267 to 104190205 938 - protein coding gene olfactory receptor 649
Olfr650-ps1 7 104206029 to 104207006 977 + polymorphic pseudogene olfactory receptor 650, pseudogene 1
Tssr68358 7 104218787 to 104218826 39 + TSS region transcription start site region 68358
Trim6 7 104218793 to 104235152 16359 + protein coding gene tripartite motif-containing 6
Tssr68359 7 104218827 to 104218849 22 + TSS region transcription start site region 68359
Tssr68360 7 104218901 to 104218912 11 + TSS region transcription start site region 68360
Tssr68361 7 104219404 to 104219410 6 + TSS region transcription start site region 68361
Gm8667 7 104222333 to 104222781 448 - pseudogene predicted gene 8667
Tssr68362 7 104244449 to 104244460 11 + TSS region transcription start site region 68362
Trim34a 7 104244457 to 104262234 17777 + protein coding gene tripartite motif-containing 34A
Tssr68363 7 104244465 to 104244491 26 + TSS region transcription start site region 68363
Tssr68364 7 104244496 to 104244552 56 + TSS region transcription start site region 68364
Tssr68365 7 104244786 to 104244791 5 + TSS region transcription start site region 68365
Tssr68366 7 104250303 to 104250306 3 + TSS region transcription start site region 68366
Gm47248 7 104261465 to 104262174 709 - antisense lncRNA gene predicted gene, 47248
Trim5 7 104263386 to 104288094 24708 - protein coding gene tripartite motif-containing 5
Gm24846 7 104264683 to 104264790 107 - snRNA gene predicted gene, 24846
D7Mit217a 7 104284550 to 104284642 92 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217a
Tssr68367 7 104291836 to 104291843 7 + TSS region transcription start site region 68367
Trim12a 7 104299894 to 104315466 15572 - protein coding gene tripartite motif-containing 12A
Tssr73984 7 104307142 to 104307146 4 - TSS region transcription start site region 73984
Tssr68368 7 104314987 to 104315011 24 + TSS region transcription start site region 68368
Gm15133 7 104315031 to 104324838 9807 + antisense lncRNA gene predicted gene 15133
Gm17788 7 104319071 to 104320177 1106 - pseudogene predicted gene, 17788
Trim34b 7 104329471 to 104336617 7146 + protein coding gene tripartite motif-containing 34B
Tssr68369 7 104332098 to 104332110 12 + TSS region transcription start site region 68369
Tssr68370 7 104332132 to 104332135 3 + TSS region transcription start site region 68370
Tssr68371 7 104333314 to 104333321 7 + TSS region transcription start site region 68371
Trim12c 7 104338754 to 104353358 14604 - protein coding gene tripartite motif-containing 12C
Gm27995 7 104340090 to 104340189 99 - snRNA gene predicted gene, 27995
D7Mit217b 7 104349896 to 104349968 72 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 217b
Gm36430 7 104351817 to 104355748 3931 + lncRNA gene predicted gene, 36430
Tssr73985 7 104353328 to 104353394 66 - TSS region transcription start site region 73985
Gm38525 7 104355396 to 104369881 14485 - protein coding gene predicted gene, 38525
Trim30b 7 104355398 to 104358646 3248 - protein coding gene tripartite motif-containing 30B
Gm45997 7 104356157 to 104362694 6537 + lncRNA gene predicted gene, 45997
Tssr73986 7 104369826 to 104369837 11 - TSS region transcription start site region 73986
Tssr73987 7 104369838 to 104369876 38 - TSS region transcription start site region 73987
Tssr73988 7 104369884 to 104369896 12 - TSS region transcription start site region 73988
Tssr73989 7 104379627 to 104379640 13 - TSS region transcription start site region 73989
Tssr73990 7 104379938 to 104379945 7 - TSS region transcription start site region 73990
Tssr73991 7 104380005 to 104380020 15 - TSS region transcription start site region 73991
Tssr73992 7 104380098 to 104380100 2 - TSS region transcription start site region 73992
Tssr73993 7 104380136 to 104380178 42 - TSS region transcription start site region 73993
Tssr73994 7 104380552 to 104380587 35 - TSS region transcription start site region 73994
Tssr73995 7 104380665 to 104380696 31 - TSS region transcription start site region 73995
Tssr73996 7 104380719 to 104380733 14 - TSS region transcription start site region 73996
Tssr73997 7 104381143 to 104381154 11 - TSS region transcription start site region 73997
Trim30c 7 104382065 to 104400837 18772 - protein coding gene tripartite motif-containing 30C
Hbbcq4 7 104394725 to 104394859 134 QTL hemoglobin concentration QTL 4
D7Mit220 7 104394725 to 104394859 134 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220
Heal6 7 104394725 to 104394859 134 QTL wound healing/regeneration 6
Stheal6 7 104394725 to 104394859 134 QTL soft tissue heal 6
D7Mit220.1 7 104394846 to 104394961 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 220.1
Tssr73998 7 104395168 to 104395177 9 - TSS region transcription start site region 73998
Tssr73999 7 104395212 to 104395222 10 - TSS region transcription start site region 73999
Tssr74000 7 104400713 to 104400718 5 - TSS region transcription start site region 74000
Tssr74001 7 104400727 to 104400739 12 - TSS region transcription start site region 74001
Tssr74002 7 104400764 to 104400786 22 - TSS region transcription start site region 74002
Tssr74003 7 104400793 to 104400802 9 - TSS region transcription start site region 74003
Tssr74004 7 104400820 to 104400861 41 - TSS region transcription start site region 74004
Tssr74005 7 104400869 to 104400880 11 - TSS region transcription start site region 74005
Tssr74006 7 104404566 to 104404579 13 - TSS region transcription start site region 74006
Gm45471 7 104405404 to 104406525 1121 - pseudogene predicted gene 45471
Trim30a 7 104409025 to 104465193 56168 - protein coding gene tripartite motif-containing 30A
Tssr74007 7 104409436 to 104409450 14 - TSS region transcription start site region 74007
Tssr74008 7 104409528 to 104409539 11 - TSS region transcription start site region 74008
Tssr74009 7 104409821 to 104409851 30 - TSS region transcription start site region 74009
Tssr74010 7 104410014 to 104410027 13 - TSS region transcription start site region 74010
Tssr74011 7 104410155 to 104410183 28 - TSS region transcription start site region 74011
Tssr74012 7 104410224 to 104410241 17 - TSS region transcription start site region 74012
Tssr74013 7 104411075 to 104411095 20 - TSS region transcription start site region 74013
Tssr74014 7 104411099 to 104411110 11 - TSS region transcription start site region 74014
Tssr74015 7 104412297 to 104412320 23 - TSS region transcription start site region 74015
Tssr74016 7 104420774 to 104420812 38 - TSS region transcription start site region 74016
Gm25405 7 104423274 to 104423380 106 + snRNA gene predicted gene, 25405
Tssr74017 7 104428485 to 104428497 12 - TSS region transcription start site region 74017
Tssr74018 7 104428534 to 104428545 11 - TSS region transcription start site region 74018
Tssr74019 7 104434753 to 104434784 31 - TSS region transcription start site region 74019
Tssr74020 7 104435716 to 104435735 19 - TSS region transcription start site region 74020
Tssr74021 7 104439292 to 104439307 15 - TSS region transcription start site region 74021
Tssr74022 7 104441390 to 104441423 33 - TSS region transcription start site region 74022
Tssr74023 7 104446047 to 104446060 13 - TSS region transcription start site region 74023
Tssr74024 7 104446070 to 104446103 33 - TSS region transcription start site region 74024
Tssr74025 7 104463630 to 104463676 46 - TSS region transcription start site region 74025
Tssr74026 7 104465141 to 104465175 34 - TSS region transcription start site region 74026
Tssr74027 7 104465177 to 104465188 11 - TSS region transcription start site region 74027
Tssr68372 7 104465673 to 104465686 13 + TSS region transcription start site region 68372
Trim30d 7 104470014 to 104507849 37835 - protein coding gene tripartite motif-containing 30D
Tssr2356 7 104472048 to 104472059 11 - TSS region transcription start site region 2356
Gm16464 7 104501055 to 104502149 1094 - pseudogene predicted gene 16464
Cpgi19529 7 104501946 to 104502394 448 CpG island CpG island 19529
Tssr74028 7 104507812 to 104507836 24 - TSS region transcription start site region 74028
Tssr2357 7 104513646 to 104513649 3 + TSS region transcription start site region 2357
Gm6574 7 104528734 to 104529095 361 - pseudogene predicted gene 6574
Trim30e-ps1 7 104532959 to 104535361 2402 - pseudogene tripartite motif-containing 30E, pseudogene 1
Olfr651 7 104552884 to 104553952 1068 + protein coding gene olfactory receptor 651
Olfr652 7 104564152 to 104565212 1060 + protein coding gene olfactory receptor 652
Olfr653 7 104579624 to 104580669 1045 + protein coding gene olfactory receptor 653
Rbcwd1 7 104585210 to 104585210 0 QTL red blood cell width distribution 1
Olfr654 7 104587755 to 104588780 1025 + protein coding gene olfactory receptor 654
Olfr655 7 104596253 to 104597179 926 - protein coding gene olfactory receptor 655