Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:102252920-102870482

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr68331 7 102266791 to 102266844 53 + TSS region transcription start site region 68331
Cpgi19525 7 102266970 to 102268442 1472 CpG island CpG island 19525
Tssr68332 7 102267294 to 102267349 55 + TSS region transcription start site region 68332
Tssr68333 7 102267795 to 102267854 59 + TSS region transcription start site region 68333
Stim1 7 102267806 to 102437319 169513 + protein coding gene stromal interaction molecule 1
Tssr68334 7 102268124 to 102268189 65 + TSS region transcription start site region 68334
Tssr68335 7 102299546 to 102299550 4 + TSS region transcription start site region 68335
Tssr68336 7 102310504 to 102310508 4 + TSS region transcription start site region 68336
Tssr68337 7 102317448 to 102317451 3 + TSS region transcription start site region 68337
Tssr68338 7 102335769 to 102335772 3 + TSS region transcription start site region 68338
Tssr68339 7 102340704 to 102340718 14 + TSS region transcription start site region 68339
A630057J21Rik 7 102360972 to 102363484 2512 unclassified non-coding RNA gene RIKEN cDNA A630057J21 gene
Gm18255 7 102377573 to 102378337 764 - pseudogene predicted gene, 18255
Tssr68340 7 102426574 to 102426582 8 + TSS region transcription start site region 68340
Tssr68341 7 102433535 to 102433539 4 + TSS region transcription start site region 68341
Cpgi19526 7 102441538 to 102442345 807 CpG island CpG island 19526
Tssr68342 7 102441685 to 102441698 13 + TSS region transcription start site region 68342
Rrm1 7 102441695 to 102469771 28076 + protein coding gene ribonucleotide reductase M1
Tssr68343 7 102441745 to 102441756 11 + TSS region transcription start site region 68343
Tssr68344 7 102441776 to 102441825 49 + TSS region transcription start site region 68344
Tssr68345 7 102441831 to 102441888 57 + TSS region transcription start site region 68345
Tssr68346 7 102441911 to 102441963 52 + TSS region transcription start site region 68346
Tssr68347 7 102442683 to 102442693 10 + TSS region transcription start site region 68347
Tssr68348 7 102442732 to 102442752 20 + TSS region transcription start site region 68348
Gm45399 7 102458245 to 102459260 1015 + unclassified gene predicted gene 45399
Gm45996 7 102470456 to 102476684 6228 + lncRNA gene predicted gene, 45996
Olfr543 7 102476773 to 102477902 1129 - protein coding gene olfactory receptor 543
Tssr73951 7 102481689 to 102481696 7 - TSS region transcription start site region 73951
Tssr68349 7 102483113 to 102483115 2 + TSS region transcription start site region 68349
Olfr544 7 102484114 to 102488307 4193 - protein coding gene olfactory receptor 544
BC049285 7 102492271 to 102493723 1452 unclassified gene cDNA sequence BC049285
Olfr545 7 102493823 to 102494773 950 - protein coding gene olfactory receptor 545
Gm38627 7 102505481 to 102506425 944 + lncRNA gene predicted gene, 38627
Cpgi19527 7 102512792 to 102513464 672 CpG island CpG island 19527
Gm8556 7 102520346 to 102521009 663 - pseudogene predicted gene 8556
Olfr546-ps1 7 102521331 to 102521656 325 + pseudogene olfactory receptor 546, pseudogene 1
D7Mit218 7 102534180 to 102534323 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 218
Olfr547 7 102534749 to 102535684 935 + protein coding gene olfactory receptor 547
Olfr548-ps1 7 102541938 to 102542879 941 + pseudogene olfactory receptor 548, pseudogene 1
Olfr549 7 102554286 to 102555236 950 + protein coding gene olfactory receptor 549
Trim21 7 102557920 to 102565482 7562 - protein coding gene tripartite motif-containing 21
Tssr73952 7 102565425 to 102565474 49 - TSS region transcription start site region 73952
Gm5339 7 102568476 to 102569416 940 - pseudogene predicted gene 5339
Olfr550 7 102571431 to 102579662 8231 + protein coding gene olfactory receptor 550
Tssr68350 7 102571496 to 102571505 9 + TSS region transcription start site region 68350
Olfr551 7 102587741 to 102588819 1078 - protein coding gene olfactory receptor 551
Olfr552 7 102604356 to 102605309 953 + protein coding gene olfactory receptor 552
Olfr553 7 102614007 to 102614987 980 - protein coding gene olfactory receptor 553
Olfr554 7 102640248 to 102641201 953 + protein coding gene olfactory receptor 554
Gm2996 7 102647630 to 102648166 536 - pseudogene predicted gene 2996
Olfr555 7 102658823 to 102659770 947 + protein coding gene olfactory receptor 555
Olfr556 7 102669901 to 102670923 1022 + protein coding gene olfactory receptor 556
Gm45687 7 102676536 to 102676690 154 + pseudogene predicted gene 45687
Trim68 7 102677582 to 102687327 9745 - protein coding gene tripartite motif-containing 68
Gm45527 7 102685446 to 102686219 773 - unclassified gene predicted gene 45527
Cpgi19528 7 102686974 to 102687512 538 CpG island CpG island 19528
Tssr73953 7 102687252 to 102687298 46 - TSS region transcription start site region 73953
Olfr557 7 102698216 to 102699272 1056 + protein coding gene olfactory receptor 557
Olfr558 7 102702323 to 102712058 9735 + protein coding gene olfactory receptor 558
Gm45688 7 102711379 to 102711479 100 - pseudogene predicted gene 45688
Olfr33 7 102713455 to 102714411 956 - protein coding gene olfactory receptor 33
Olfr559 7 102723532 to 102724488 956 - protein coding gene olfactory receptor 559
Gm24210 7 102734582 to 102734714 132 - snoRNA gene predicted gene, 24210
Olfr78 7 102740721 to 102759471 18750 - protein coding gene olfactory receptor 78
Olfr560 7 102752983 to 102753927 944 - protein coding gene olfactory receptor 560
Tssr73954 7 102759465 to 102759478 13 - TSS region transcription start site region 73954
Tssr73955 7 102759489 to 102759502 13 - TSS region transcription start site region 73955
Olfr561 7 102774526 to 102775470 944 + protein coding gene olfactory receptor 561
Olfr562-ps1 7 102781478 to 102782428 950 + polymorphic pseudogene olfactory receptor 562, pseudogene 1
Olfr563-ps1 7 102791250 to 102792330 1080 + pseudogene olfactory receptor 563, pseudogene 1
Olfr564 7 102803480 to 102804430 950 + protein coding gene olfactory receptor 564
Olfr565-ps1 7 102817575 to 102818495 920 - pseudogene olfactory receptor 565, pseudogene 1
Olfr566 7 102856321 to 102857271 950 - protein coding gene olfactory receptor 566
Gm45689 7 102861160 to 102861292 132 - pseudogene predicted gene 45689
Olfr567-ps1 7 102863922 to 102864778 856 - pseudogene olfactory receptor 567, pseudogene 1