Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101986736-102216752

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Numa1 7 101934111 to 102014964 80853 + protein coding gene nuclear mitotic apparatus protein 1
Gm39061 7 101988668 to 101990948 2280 - lncRNA gene predicted gene, 39061
Tssr68295 7 101993261 to 101993276 15 + TSS region transcription start site region 68295
Cpgi19516 7 102001091 to 102001294 203 CpG island CpG island 19516
Tssr73892 7 102007756 to 102007760 4 - TSS region transcription start site region 73892
Il18bp 7 102015077 to 102018155 3078 - protein coding gene interleukin 18 binding protein
Tssr73893 7 102015683 to 102015698 15 - TSS region transcription start site region 73893
Tssr73894 7 102015808 to 102015833 25 - TSS region transcription start site region 73894
Tssr73895 7 102016122 to 102016144 22 - TSS region transcription start site region 73895
Tssr73896 7 102016145 to 102016157 12 - TSS region transcription start site region 73896
Tssr2353 7 102017388 to 102017398 10 + TSS region transcription start site region 2353
Tssr73897 7 102017630 to 102017650 20 - TSS region transcription start site region 73897
Tssr73898 7 102017653 to 102017671 18 - TSS region transcription start site region 73898
Tssr73899 7 102018139 to 102018206 67 - TSS region transcription start site region 73899
Tssr73900 7 102018222 to 102018239 17 - TSS region transcription start site region 73900
Rnf121 7 102019137 to 102065469 46332 - protein coding gene ring finger protein 121
Tssr68296 7 102019152 to 102019153 1 + TSS region transcription start site region 68296
Tssr73901 7 102019491 to 102019516 25 - TSS region transcription start site region 73901
Tssr73902 7 102019525 to 102019540 15 - TSS region transcription start site region 73902
Tssr73903 7 102019551 to 102019558 7 - TSS region transcription start site region 73903
Tssr68297 7 102041283 to 102041289 6 + TSS region transcription start site region 68297
Tssr73904 7 102062482 to 102062492 10 - TSS region transcription start site region 73904
Cpgi19517 7 102065057 to 102065734 677 CpG island CpG island 19517
Tssr73905 7 102065126 to 102065159 33 - TSS region transcription start site region 73905
Tssr68298 7 102065485 to 102065527 42 + TSS region transcription start site region 68298
Xndc1 7 102065511 to 102083765 18254 + protein coding gene Xrcc1 N-terminal domain containing 1
Xntrpc 7 102065713 to 102096864 31151 + protein coding gene Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
Tssr68299 7 102065738 to 102065771 33 + TSS region transcription start site region 68299
Tssr73906 7 102072409 to 102072417 8 - TSS region transcription start site region 73906
Tssr73907 7 102072419 to 102072428 9 - TSS region transcription start site region 73907
Tssr68300 7 102072521 to 102072535 14 + TSS region transcription start site region 68300
Trpc2 7 102083116 to 102096396 13280 + protein coding gene transient receptor potential cation channel, subfamily C, member 2
Cpgi19518 7 102084181 to 102084551 370 CpG island CpG island 19518
Art5 7 102096879 to 102100307 3428 - protein coding gene ADP-ribosyltransferase 5
Tssr73908 7 102099895 to 102099906 11 - TSS region transcription start site region 73908
Tssr73909 7 102099932 to 102099943 11 - TSS region transcription start site region 73909
Tssr73910 7 102100202 to 102100219 17 - TSS region transcription start site region 73910
Tssr73911 7 102100227 to 102100258 31 - TSS region transcription start site region 73911
Art1 7 102101706 to 102111758 10052 + protein coding gene ADP-ribosyltransferase 1
Tssr68301 7 102101736 to 102101752 16 + TSS region transcription start site region 68301
Cpgi19519 7 102106741 to 102107257 516 CpG island CpG island 19519
Tssr68302 7 102107044 to 102107073 29 + TSS region transcription start site region 68302
Tssr68303 7 102107146 to 102107149 3 + TSS region transcription start site region 68303
Chrna10 7 102111266 to 102116828 5562 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 10
Cpgi19520 7 102113031 to 102113744 713 CpG island CpG island 19520
Gm39062 7 102113387 to 102122062 8675 + lncRNA gene predicted gene, 39062
Tssr73912 7 102116705 to 102116719 14 - TSS region transcription start site region 73912
Tssr73913 7 102116721 to 102116733 12 - TSS region transcription start site region 73913
Tssr73914 7 102116743 to 102116755 12 - TSS region transcription start site region 73914
Tssr73915 7 102116763 to 102116774 11 - TSS region transcription start site region 73915
Nup98 7 102119398 to 102210176 90778 - protein coding gene nucleoporin 98
Tssr73916 7 102120180 to 102120185 5 - TSS region transcription start site region 73916
Tssr73917 7 102120303 to 102120323 20 - TSS region transcription start site region 73917
Tssr73918 7 102151415 to 102151421 6 - TSS region transcription start site region 73918
Tssr73919 7 102163727 to 102163749 22 - TSS region transcription start site region 73919
Tssr73920 7 102209160 to 102209164 4 - TSS region transcription start site region 73920
Cpgi19521 7 102209611 to 102210756 1145 CpG island CpG island 19521
Tssr73921 7 102209826 to 102209910 84 - TSS region transcription start site region 73921
Tssr73922 7 102210074 to 102210094 20 - TSS region transcription start site region 73922
Tssr73923 7 102210120 to 102210157 37 - TSS region transcription start site region 73923
Tssr68304 7 102210168 to 102210177 9 + TSS region transcription start site region 68304
Tssr73924 7 102210172 to 102210183 11 - TSS region transcription start site region 73924
Pgap2 7 102210213 to 102238564 28351 + protein coding gene post-GPI attachment to proteins 2
Tssr73925 7 102210270 to 102210277 7 - TSS region transcription start site region 73925
Tssr73926 7 102210382 to 102210408 26 - TSS region transcription start site region 73926
Tssr73927 7 102210409 to 102210435 26 - TSS region transcription start site region 73927
Tssr68305 7 102210428 to 102210445 17 + TSS region transcription start site region 68305
Tssr68306 7 102210499 to 102210553 54 + TSS region transcription start site region 68306
Tssr68307 7 102210592 to 102210620 28 + TSS region transcription start site region 68307