Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101395059-103085148

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354 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261
Tssr68262 7 101763517 to 101763524 7 + TSS region transcription start site region 68262
Tssr68263 7 101765492 to 101765493 1 + TSS region transcription start site region 68263
Gm45380 7 101790536 to 101790850 314 + pseudogene predicted gene 45380
Cpgi19508 7 101817108 to 101817312 204 CpG island CpG island 19508
Cpgi19509 7 101817732 to 101818926 1194 CpG island CpG island 19509
Tssr68264 7 101818306 to 101818321 15 + TSS region transcription start site region 68264
Phox2a 7 101818313 to 101822726 4413 + protein coding gene paired-like homeobox 2a
Cpgi19510 7 101820672 to 101822524 1852 CpG island CpG island 19510
Tssr68265 7 101820735 to 101820755 20 + TSS region transcription start site region 68265
Inppl1 7 101822632 to 101838226 15594 - protein coding gene inositol polyphosphate phosphatase-like 1
Tssr73848 7 101832925 to 101832963 38 - TSS region transcription start site region 73848
Cpgi19511 7 101836343 to 101838282 1939 CpG island CpG island 19511
Gm10602 7 101836503 to 101842771 6268 + antisense lncRNA gene predicted gene 10602
Tssr68266 7 101836588 to 101836640 52 + TSS region transcription start site region 68266
Tssr73849 7 101836935 to 101836988 53 - TSS region transcription start site region 73849
Tssr68267 7 101837063 to 101837094 31 + TSS region transcription start site region 68267
Tssr73850 7 101837735 to 101837768 33 - TSS region transcription start site region 73850
Tssr73851 7 101837776 to 101837832 56 - TSS region transcription start site region 73851
Tssr68268 7 101837838 to 101837897 59 + TSS region transcription start site region 68268
Tssr73852 7 101837875 to 101837958 83 - TSS region transcription start site region 73852
Tssr73853 7 101837999 to 101838014 15 - TSS region transcription start site region 73853
Folr2 7 101839988 to 101857190 17202 - protein coding gene folate receptor 2 (fetal)
Tssr73854 7 101845267 to 101845276 9 - TSS region transcription start site region 73854
Tssr73855 7 101845300 to 101845339 39 - TSS region transcription start site region 73855
Tssr2352 7 101845345 to 101845348 3 - TSS region transcription start site region 2352
Gm45319 7 101852959 to 101853276 317 + pseudogene predicted gene 45319
Folr1 7 101858331 to 101870788 12457 - protein coding gene folate receptor 1 (adult)
Tssr68269 7 101863743 to 101863771 28 + TSS region transcription start site region 68269
Tssr68270 7 101863781 to 101863793 12 + TSS region transcription start site region 68270
Tssr73856 7 101864093 to 101864156 63 - TSS region transcription start site region 73856
Tssr73857 7 101864160 to 101864168 8 - TSS region transcription start site region 73857
Tssr73858 7 101866770 to 101866781 11 - TSS region transcription start site region 73858
Tssr73859 7 101867297 to 101867338 41 - TSS region transcription start site region 73859
Tssr73860 7 101867391 to 101867420 29 - TSS region transcription start site region 73860
Tssr73861 7 101868447 to 101868498 51 - TSS region transcription start site region 73861
Tssr73862 7 101868509 to 101868522 13 - TSS region transcription start site region 73862
Tssr73863 7 101868672 to 101868700 28 - TSS region transcription start site region 73863
Tssr73864 7 101868724 to 101868725 1 - TSS region transcription start site region 73864
Tssr73865 7 101869012 to 101869023 11 - TSS region transcription start site region 73865
Tssr73866 7 101869034 to 101869073 39 - TSS region transcription start site region 73866
Tssr73867 7 101869206 to 101869230 24 - TSS region transcription start site region 73867
Tssr73868 7 101869234 to 101869256 22 - TSS region transcription start site region 73868
Tssr73869 7 101869257 to 101869277 20 - TSS region transcription start site region 73869
Tssr73870 7 101869292 to 101869302 10 - TSS region transcription start site region 73870
Tssr73871 7 101869307 to 101869344 37 - TSS region transcription start site region 73871
Tssr73872 7 101869349 to 101869358 9 - TSS region transcription start site region 73872
Tssr73873 7 101870606 to 101870612 6 - TSS region transcription start site region 73873
Tssr73874 7 101870631 to 101870646 15 - TSS region transcription start site region 73874
Tssr73875 7 101870657 to 101870676 19 - TSS region transcription start site region 73875
Tssr73876 7 101870687 to 101870707 20 - TSS region transcription start site region 73876
Tssr73877 7 101870711 to 101870756 45 - TSS region transcription start site region 73877
Tssr73878 7 101870766 to 101870777 11 - TSS region transcription start site region 73878
Tssr73879 7 101870778 to 101870787 9 - TSS region transcription start site region 73879
Tssr73880 7 101870801 to 101870807 6 - TSS region transcription start site region 73880
Gm35597 7 101870860 to 101879577 8717 + lncRNA gene predicted gene, 35597
Tssr68271 7 101871521 to 101871533 12 + TSS region transcription start site region 68271
Tssr68272 7 101871540 to 101871551 11 + TSS region transcription start site region 68272
Tssr68273 7 101871590 to 101871612 22 + TSS region transcription start site region 68273
Tssr68274 7 101871636 to 101871644 8 + TSS region transcription start site region 68274
Tssr68275 7 101879592 to 101879605 13 + TSS region transcription start site region 68275
Tssr68276 7 101879886 to 101879922 36 + TSS region transcription start site region 68276
Gm22655 7 101881184 to 101881279 95 + miRNA gene predicted gene, 22655
Tssr68277 7 101881297 to 101881320 23 + TSS region transcription start site region 68277
Anapc15 7 101881300 to 101901849 20549 + protein coding gene anaphase prompoting complex C subunit 15
Tssr68278 7 101882746 to 101882754 8 + TSS region transcription start site region 68278
Tssr68279 7 101884843 to 101884849 6 + TSS region transcription start site region 68279
Cpgi19512 7 101896013 to 101896862 849 CpG island CpG island 19512
Tssr73881 7 101896203 to 101896275 72 - TSS region transcription start site region 73881
Tssr68280 7 101896372 to 101896431 59 + TSS region transcription start site region 68280
Tssr68281 7 101896817 to 101896850 33 + TSS region transcription start site region 68281
Tssr68282 7 101896852 to 101896869 17 + TSS region transcription start site region 68282
Tomt 7 101899803 to 101906405 6602 - protein coding gene transmembrane O-methyltransferase
Tssr73882 7 101903748 to 101903777 29 - TSS region transcription start site region 73882
Tssr73883 7 101903783 to 101903786 3 - TSS region transcription start site region 73883
Cpgi19513 7 101905495 to 101906344 849 CpG island CpG island 19513
Tssr73884 7 101905679 to 101905701 22 - TSS region transcription start site region 73884
Lamtor1 7 101905837 to 101911903 6066 + protein coding gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
Tssr68283 7 101905910 to 101905992 82 + TSS region transcription start site region 68283
Lrrc51 7 101912984 to 101933895 20911 - protein coding gene leucine rich repeat containing 51
Tssr73885 7 101921175 to 101921181 6 - TSS region transcription start site region 73885
Tssr73886 7 101921186 to 101921230 44 - TSS region transcription start site region 73886
Tssr68284 7 101921309 to 101921320 11 + TSS region transcription start site region 68284
Tssr73887 7 101921751 to 101921793 42 - TSS region transcription start site region 73887
Cpgi19514 7 101933563 to 101934502 939 CpG island CpG island 19514
Tssr73888 7 101933780 to 101933806 26 - TSS region transcription start site region 73888
Tssr73889 7 101933815 to 101933897 82 - TSS region transcription start site region 73889
Tssr73890 7 101933907 to 101933918 11 - TSS region transcription start site region 73890
Tssr68285 7 101933953 to 101934026 73 + TSS region transcription start site region 68285
Tssr68286 7 101934076 to 101934190 114 + TSS region transcription start site region 68286
Numa1 7 101934111 to 102014964 80853 + protein coding gene nuclear mitotic apparatus protein 1
Tssr73891 7 101934329 to 101934344 15 - TSS region transcription start site region 73891
Gm8523 7 101945962 to 101946513 551 - pseudogene predicted gene 8523
Gm45312 7 101956975 to 101957285 310 - pseudogene predicted gene 45312
Tssr68287 7 101969636 to 101969674 38 + TSS region transcription start site region 68287
Cpgi19515 7 101969691 to 101970609 918 CpG island CpG island 19515
Tssr68288 7 101969796 to 101969840 44 + TSS region transcription start site region 68288
Tssr68289 7 101970132 to 101970185 53 + TSS region transcription start site region 68289
Tssr68290 7 101970191 to 101970206 15 + TSS region transcription start site region 68290
Tssr68291 7 101970211 to 101970223 12 + TSS region transcription start site region 68291
Tssr68292 7 101970642 to 101970689 47 + TSS region transcription start site region 68292
Tssr68293 7 101970690 to 101970730 40 + TSS region transcription start site region 68293
Tssr68294 7 101976873 to 101976880 7 + TSS region transcription start site region 68294
C030040A22Rik 7 101979660 to 101982290 2630 unclassified gene RIKEN cDNA C030040A22 gene
Gm45313 7 101980083 to 101980260 177 - pseudogene predicted gene 45313
Gm39061 7 101988668 to 101990948 2280 - lncRNA gene predicted gene, 39061
Tssr68295 7 101993261 to 101993276 15 + TSS region transcription start site region 68295
Cpgi19516 7 102001091 to 102001294 203 CpG island CpG island 19516
Tssr73892 7 102007756 to 102007760 4 - TSS region transcription start site region 73892
Il18bp 7 102015077 to 102018155 3078 - protein coding gene interleukin 18 binding protein
Tssr73893 7 102015683 to 102015698 15 - TSS region transcription start site region 73893
Tssr73894 7 102015808 to 102015833 25 - TSS region transcription start site region 73894
Tssr73895 7 102016122 to 102016144 22 - TSS region transcription start site region 73895
Tssr73896 7 102016145 to 102016157 12 - TSS region transcription start site region 73896
Tssr2353 7 102017388 to 102017398 10 + TSS region transcription start site region 2353
Tssr73897 7 102017630 to 102017650 20 - TSS region transcription start site region 73897
Tssr73898 7 102017653 to 102017671 18 - TSS region transcription start site region 73898
Tssr73899 7 102018139 to 102018206 67 - TSS region transcription start site region 73899
Tssr73900 7 102018222 to 102018239 17 - TSS region transcription start site region 73900
Rnf121 7 102019137 to 102065469 46332 - protein coding gene ring finger protein 121
Tssr68296 7 102019152 to 102019153 1 + TSS region transcription start site region 68296
Tssr73901 7 102019491 to 102019516 25 - TSS region transcription start site region 73901
Tssr73902 7 102019525 to 102019540 15 - TSS region transcription start site region 73902
Tssr73903 7 102019551 to 102019558 7 - TSS region transcription start site region 73903
Tssr68297 7 102041283 to 102041289 6 + TSS region transcription start site region 68297
Tssr73904 7 102062482 to 102062492 10 - TSS region transcription start site region 73904
Cpgi19517 7 102065057 to 102065734 677 CpG island CpG island 19517
Tssr73905 7 102065126 to 102065159 33 - TSS region transcription start site region 73905
Tssr68298 7 102065485 to 102065527 42 + TSS region transcription start site region 68298
Xndc1 7 102065511 to 102083765 18254 + protein coding gene Xrcc1 N-terminal domain containing 1
Xntrpc 7 102065713 to 102096864 31151 + protein coding gene Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
Tssr68299 7 102065738 to 102065771 33 + TSS region transcription start site region 68299
Tssr73906 7 102072409 to 102072417 8 - TSS region transcription start site region 73906
Tssr73907 7 102072419 to 102072428 9 - TSS region transcription start site region 73907
Tssr68300 7 102072521 to 102072535 14 + TSS region transcription start site region 68300
Trpc2 7 102083116 to 102096396 13280 + protein coding gene transient receptor potential cation channel, subfamily C, member 2
Cpgi19518 7 102084181 to 102084551 370 CpG island CpG island 19518
Art5 7 102096879 to 102100307 3428 - protein coding gene ADP-ribosyltransferase 5
Tssr73908 7 102099895 to 102099906 11 - TSS region transcription start site region 73908
Tssr73909 7 102099932 to 102099943 11 - TSS region transcription start site region 73909
Tssr73910 7 102100202 to 102100219 17 - TSS region transcription start site region 73910
Tssr73911 7 102100227 to 102100258 31 - TSS region transcription start site region 73911
Art1 7 102101706 to 102111758 10052 + protein coding gene ADP-ribosyltransferase 1
Tssr68301 7 102101736 to 102101752 16 + TSS region transcription start site region 68301
Cpgi19519 7 102106741 to 102107257 516 CpG island CpG island 19519
Tssr68302 7 102107044 to 102107073 29 + TSS region transcription start site region 68302
Tssr68303 7 102107146 to 102107149 3 + TSS region transcription start site region 68303
Chrna10 7 102111266 to 102116828 5562 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 10
Cpgi19520 7 102113031 to 102113744 713 CpG island CpG island 19520
Gm39062 7 102113387 to 102122062 8675 + lncRNA gene predicted gene, 39062
Tssr73912 7 102116705 to 102116719 14 - TSS region transcription start site region 73912
Tssr73913 7 102116721 to 102116733 12 - TSS region transcription start site region 73913
Tssr73914 7 102116743 to 102116755 12 - TSS region transcription start site region 73914
Tssr73915 7 102116763 to 102116774 11 - TSS region transcription start site region 73915
Nup98 7 102119398 to 102210176 90778 - protein coding gene nucleoporin 98
Tssr73916 7 102120180 to 102120185 5 - TSS region transcription start site region 73916
Tssr73917 7 102120303 to 102120323 20 - TSS region transcription start site region 73917
Tssr73918 7 102151415 to 102151421 6 - TSS region transcription start site region 73918
Tssr73919 7 102163727 to 102163749 22 - TSS region transcription start site region 73919
Tssr73920 7 102209160 to 102209164 4 - TSS region transcription start site region 73920
Cpgi19521 7 102209611 to 102210756 1145 CpG island CpG island 19521
Tssr73921 7 102209826 to 102209910 84 - TSS region transcription start site region 73921