Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101370644-101870648

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Cpgi19503 7 101373066 to 101373277 211 CpG island CpG island 19503
Tssr68231 7 101373199 to 101373231 32 + TSS region transcription start site region 68231
Tssr68232 7 101373271 to 101373284 13 + TSS region transcription start site region 68232
Tssr68233 7 101373309 to 101373341 32 + TSS region transcription start site region 68233
Tssr68234 7 101378110 to 101378133 23 + TSS region transcription start site region 68234
Tssr68235 7 101378183 to 101378210 27 + TSS region transcription start site region 68235
Tssr73839 7 101379884 to 101379898 14 - TSS region transcription start site region 73839
Tssr68236 7 101382814 to 101382840 26 + TSS region transcription start site region 68236
Tssr68237 7 101383947 to 101383962 15 + TSS region transcription start site region 68237
Tssr68238 7 101383969 to 101383976 7 + TSS region transcription start site region 68238
Tssr68239 7 101383985 to 101384000 15 + TSS region transcription start site region 68239
Tssr68240 7 101384011 to 101384038 27 + TSS region transcription start site region 68240
Tssr68241 7 101384050 to 101384075 25 + TSS region transcription start site region 68241
Tssr68242 7 101384872 to 101384887 15 + TSS region transcription start site region 68242
Tssr68243 7 101384888 to 101384911 23 + TSS region transcription start site region 68243
Tssr68244 7 101385523 to 101385552 29 + TSS region transcription start site region 68244
Tssr68245 7 101386785 to 101386800 15 + TSS region transcription start site region 68245
Tssr68246 7 101394361 to 101394436 75 + TSS region transcription start site region 68246
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261
Tssr68262 7 101763517 to 101763524 7 + TSS region transcription start site region 68262
Tssr68263 7 101765492 to 101765493 1 + TSS region transcription start site region 68263
Gm45380 7 101790536 to 101790850 314 + pseudogene predicted gene 45380
Cpgi19508 7 101817108 to 101817312 204 CpG island CpG island 19508
Cpgi19509 7 101817732 to 101818926 1194 CpG island CpG island 19509
Tssr68264 7 101818306 to 101818321 15 + TSS region transcription start site region 68264
Phox2a 7 101818313 to 101822726 4413 + protein coding gene paired-like homeobox 2a
Cpgi19510 7 101820672 to 101822524 1852 CpG island CpG island 19510
Tssr68265 7 101820735 to 101820755 20 + TSS region transcription start site region 68265
Inppl1 7 101822632 to 101838226 15594 - protein coding gene inositol polyphosphate phosphatase-like 1
Tssr73848 7 101832925 to 101832963 38 - TSS region transcription start site region 73848
Cpgi19511 7 101836343 to 101838282 1939 CpG island CpG island 19511
Gm10602 7 101836503 to 101842771 6268 + antisense lncRNA gene predicted gene 10602
Tssr68266 7 101836588 to 101836640 52 + TSS region transcription start site region 68266
Tssr73849 7 101836935 to 101836988 53 - TSS region transcription start site region 73849
Tssr68267 7 101837063 to 101837094 31 + TSS region transcription start site region 68267
Tssr73850 7 101837735 to 101837768 33 - TSS region transcription start site region 73850
Tssr73851 7 101837776 to 101837832 56 - TSS region transcription start site region 73851
Tssr68268 7 101837838 to 101837897 59 + TSS region transcription start site region 68268
Tssr73852 7 101837875 to 101837958 83 - TSS region transcription start site region 73852
Tssr73853 7 101837999 to 101838014 15 - TSS region transcription start site region 73853
Folr2 7 101839988 to 101857190 17202 - protein coding gene folate receptor 2 (fetal)
Tssr73854 7 101845267 to 101845276 9 - TSS region transcription start site region 73854
Tssr73855 7 101845300 to 101845339 39 - TSS region transcription start site region 73855
Tssr2352 7 101845345 to 101845348 3 - TSS region transcription start site region 2352
Gm45319 7 101852959 to 101853276 317 + pseudogene predicted gene 45319
Folr1 7 101858331 to 101870788 12457 - protein coding gene folate receptor 1 (adult)
Tssr68269 7 101863743 to 101863771 28 + TSS region transcription start site region 68269
Tssr68270 7 101863781 to 101863793 12 + TSS region transcription start site region 68270
Tssr73856 7 101864093 to 101864156 63 - TSS region transcription start site region 73856
Tssr73857 7 101864160 to 101864168 8 - TSS region transcription start site region 73857
Tssr73858 7 101866770 to 101866781 11 - TSS region transcription start site region 73858
Tssr73859 7 101867297 to 101867338 41 - TSS region transcription start site region 73859
Tssr73860 7 101867391 to 101867420 29 - TSS region transcription start site region 73860
Tssr73861 7 101868447 to 101868498 51 - TSS region transcription start site region 73861
Tssr73862 7 101868509 to 101868522 13 - TSS region transcription start site region 73862
Tssr73863 7 101868672 to 101868700 28 - TSS region transcription start site region 73863
Tssr73864 7 101868724 to 101868725 1 - TSS region transcription start site region 73864
Tssr73865 7 101869012 to 101869023 11 - TSS region transcription start site region 73865
Tssr73866 7 101869034 to 101869073 39 - TSS region transcription start site region 73866
Tssr73867 7 101869206 to 101869230 24 - TSS region transcription start site region 73867
Tssr73868 7 101869234 to 101869256 22 - TSS region transcription start site region 73868
Tssr73869 7 101869257 to 101869277 20 - TSS region transcription start site region 73869
Tssr73870 7 101869292 to 101869302 10 - TSS region transcription start site region 73870
Tssr73871 7 101869307 to 101869344 37 - TSS region transcription start site region 73871
Tssr73872 7 101869349 to 101869358 9 - TSS region transcription start site region 73872
Tssr73873 7 101870606 to 101870612 6 - TSS region transcription start site region 73873
Tssr73874 7 101870631 to 101870646 15 - TSS region transcription start site region 73874