Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101014160-103404164

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485 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45070 7 101018623 to 101018868 245 - pseudogene predicted gene 45070
D7Mit203 7 101020903 to 101021043 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 203
Tssr68186 7 101052962 to 101052964 2 + TSS region transcription start site region 68186
Cpgi19496 7 101061263 to 101061704 441 CpG island CpG island 19496
Gm5735 7 101061309 to 101061475 166 - pseudogene predicted gene 5735
Tssr68187 7 101092828 to 101092859 31 + TSS region transcription start site region 68187
Tssr68188 7 101092875 to 101092882 7 + TSS region transcription start site region 68188
Cpgi19497 7 101107676 to 101109796 2120 CpG island CpG island 19497
Tssr68189 7 101108464 to 101108503 39 + TSS region transcription start site region 68189
Tssr68190 7 101108519 to 101108546 27 + TSS region transcription start site region 68190
Tssr68191 7 101108548 to 101108579 31 + TSS region transcription start site region 68191
Tssr68192 7 101108600 to 101108642 42 + TSS region transcription start site region 68192
Fchsd2 7 101108711 to 101284405 175694 + protein coding gene FCH and double SH3 domains 2
Tssr68193 7 101108740 to 101108753 13 + TSS region transcription start site region 68193
Tssr68194 7 101108768 to 101108783 15 + TSS region transcription start site region 68194
Tssr68195 7 101108788 to 101108811 23 + TSS region transcription start site region 68195
Tssr68196 7 101109313 to 101109323 10 + TSS region transcription start site region 68196
Tssr68197 7 101110735 to 101110747 12 + TSS region transcription start site region 68197
Tssr2349 7 101111995 to 101112029 34 + TSS region transcription start site region 2349
6030496E16Rik 7 101113551 to 101117796 4245 unclassified gene RIKEN cDNA 6030496E16 gene
Tssr2350 7 101144497 to 101144502 5 + TSS region transcription start site region 2350
Tssr68198 7 101148146 to 101148171 25 + TSS region transcription start site region 68198
Gm6341 7 101154645 to 101155055 410 - pseudogene predicted pseudogene 6341
Tssr68199 7 101163029 to 101163037 8 + TSS region transcription start site region 68199
Tssr68200 7 101164195 to 101164200 5 + TSS region transcription start site region 68200
D7Mit126 7 101201127 to 101201300 173 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 126
Tssr68201 7 101201168 to 101201173 5 + TSS region transcription start site region 68201
Tssr68202 7 101205395 to 101205407 12 + TSS region transcription start site region 68202
6430502G17Rik 7 101207664 to 101211024 3360 unclassified gene RIKEN cDNA 6430502G17 gene
Tssr68203 7 101214221 to 101214231 10 + TSS region transcription start site region 68203
Tssr68204 7 101219282 to 101219317 35 + TSS region transcription start site region 68204
Tssr68205 7 101223761 to 101223771 10 + TSS region transcription start site region 68205
Gm47324 7 101238218 to 101239278 1060 + pseudogene predicted gene, 47324
Tssr68206 7 101241056 to 101241061 5 + TSS region transcription start site region 68206
Atg16l2 7 101286325 to 101302267 15942 - protein coding gene autophagy related 16-like 2 (S. cerevisiae)
Tssr73825 7 101293479 to 101293483 4 - TSS region transcription start site region 73825
Cpgi19498 7 101296565 to 101297311 746 CpG island CpG island 19498
Cpgi19499 7 101301270 to 101302368 1098 CpG island CpG island 19499
Tssr68207 7 101301421 to 101301433 12 + TSS region transcription start site region 68207
Tssr73826 7 101301657 to 101301671 14 - TSS region transcription start site region 73826
Tssr73827 7 101301683 to 101301697 14 - TSS region transcription start site region 73827
Tssr73828 7 101301699 to 101301711 12 - TSS region transcription start site region 73828
Tssr73829 7 101301723 to 101301744 21 - TSS region transcription start site region 73829
Tssr68208 7 101301868 to 101301901 33 + TSS region transcription start site region 68208
Tssr73830 7 101302020 to 101302082 62 - TSS region transcription start site region 73830
Cpgi19500 7 101310459 to 101311024 565 CpG island CpG island 19500
Tssr68209 7 101317052 to 101317057 5 + TSS region transcription start site region 68209
Tssr68210 7 101317073 to 101317132 59 + TSS region transcription start site region 68210
Stard10 7 101317091 to 101346312 29221 + protein coding gene START domain containing 10
Gm20476 7 101317724 to 101326231 8507 - antisense lncRNA gene predicted gene 20476
Tssr68211 7 101320626 to 101320637 11 + TSS region transcription start site region 68211
Cpgi19501 7 101320716 to 101322201 1485 CpG island CpG island 19501
Tssr68212 7 101321079 to 101321134 55 + TSS region transcription start site region 68212
Tssr68213 7 101321138 to 101321149 11 + TSS region transcription start site region 68213
Tssr68214 7 101321230 to 101321320 90 + TSS region transcription start site region 68214
Tssr68215 7 101321703 to 101321790 87 + TSS region transcription start site region 68215
Tssr68216 7 101321858 to 101321869 11 + TSS region transcription start site region 68216
Tssr68217 7 101324402 to 101324405 3 + TSS region transcription start site region 68217
Tssr68218 7 101330353 to 101330368 15 + TSS region transcription start site region 68218
Tssr68219 7 101332857 to 101332859 2 + TSS region transcription start site region 68219
Gm45344 7 101338127 to 101338467 340 + pseudogene predicted gene 45344
Tssr68220 7 101345968 to 101345977 9 + TSS region transcription start site region 68220
Gm45620 7 101347409 to 101347984 575 - lincRNA gene predicted gene 45620
Cpgi19502 7 101347785 to 101348569 784 CpG island CpG island 19502
Tssr73831 7 101347984 to 101348014 30 - TSS region transcription start site region 73831
Tssr68221 7 101348061 to 101348128 67 + TSS region transcription start site region 68221
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Tssr68222 7 101348140 to 101348149 9 + TSS region transcription start site region 68222
Gm35219 7 101348208 to 101355423 7215 - lncRNA gene predicted gene, 35219
Gm45548 7 101351273 to 101354439 3166 - unclassified gene predicted gene 45548
Tssr73832 7 101354415 to 101354422 7 - TSS region transcription start site region 73832
Tssr73833 7 101354431 to 101354446 15 - TSS region transcription start site region 73833
D7Mit138 7 101357379 to 101357492 113 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 138
Tssr68223 7 101361250 to 101361287 37 + TSS region transcription start site region 68223
Tssr68224 7 101361465 to 101361507 42 + TSS region transcription start site region 68224
Tssr73834 7 101361864 to 101361888 24 - TSS region transcription start site region 73834
Tssr73835 7 101361913 to 101361930 17 - TSS region transcription start site region 73835
Tssr68225 7 101361967 to 101361978 11 + TSS region transcription start site region 68225
Tssr68226 7 101361979 to 101361988 9 + TSS region transcription start site region 68226
Tssr68227 7 101361997 to 101362044 47 + TSS region transcription start site region 68227
Tssr68228 7 101362054 to 101362069 15 + TSS region transcription start site region 68228
Tssr73836 7 101362770 to 101362780 10 - TSS region transcription start site region 73836
Tssr73837 7 101362813 to 101362818 5 - TSS region transcription start site region 73837
Tssr73838 7 101362871 to 101362884 13 - TSS region transcription start site region 73838
Tssr68229 7 101363043 to 101363090 47 + TSS region transcription start site region 68229
Tssr68230 7 101366572 to 101366593 21 + TSS region transcription start site region 68230
Cpgi19503 7 101373066 to 101373277 211 CpG island CpG island 19503
Tssr68231 7 101373199 to 101373231 32 + TSS region transcription start site region 68231
Tssr68232 7 101373271 to 101373284 13 + TSS region transcription start site region 68232
Tssr68233 7 101373309 to 101373341 32 + TSS region transcription start site region 68233
Tssr68234 7 101378110 to 101378133 23 + TSS region transcription start site region 68234
Tssr68235 7 101378183 to 101378210 27 + TSS region transcription start site region 68235
Tssr73839 7 101379884 to 101379898 14 - TSS region transcription start site region 73839
Tssr68236 7 101382814 to 101382840 26 + TSS region transcription start site region 68236
Tssr68237 7 101383947 to 101383962 15 + TSS region transcription start site region 68237
Tssr68238 7 101383969 to 101383976 7 + TSS region transcription start site region 68238
Tssr68239 7 101383985 to 101384000 15 + TSS region transcription start site region 68239
Tssr68240 7 101384011 to 101384038 27 + TSS region transcription start site region 68240
Tssr68241 7 101384050 to 101384075 25 + TSS region transcription start site region 68241
Tssr68242 7 101384872 to 101384887 15 + TSS region transcription start site region 68242
Tssr68243 7 101384888 to 101384911 23 + TSS region transcription start site region 68243
Tssr68244 7 101385523 to 101385552 29 + TSS region transcription start site region 68244
Tssr68245 7 101386785 to 101386800 15 + TSS region transcription start site region 68245
Tssr68246 7 101394361 to 101394436 75 + TSS region transcription start site region 68246
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261
Tssr68262 7 101763517 to 101763524 7 + TSS region transcription start site region 68262
Tssr68263 7 101765492 to 101765493 1 + TSS region transcription start site region 68263
Gm45380 7 101790536 to 101790850 314 + pseudogene predicted gene 45380
Cpgi19508 7 101817108 to 101817312 204 CpG island CpG island 19508
Cpgi19509 7 101817732 to 101818926 1194 CpG island CpG island 19509
Tssr68264 7 101818306 to 101818321 15 + TSS region transcription start site region 68264
Phox2a 7 101818313 to 101822726 4413 + protein coding gene paired-like homeobox 2a
Cpgi19510 7 101820672 to 101822524 1852 CpG island CpG island 19510
Tssr68265 7 101820735 to 101820755 20 + TSS region transcription start site region 68265
Inppl1 7 101822632 to 101838226 15594 - protein coding gene inositol polyphosphate phosphatase-like 1
Tssr73848 7 101832925 to 101832963 38 - TSS region transcription start site region 73848
Cpgi19511 7 101836343 to 101838282 1939 CpG island CpG island 19511
Gm10602 7 101836503 to 101842771 6268 + antisense lncRNA gene predicted gene 10602
Tssr68266 7 101836588 to 101836640 52 + TSS region transcription start site region 68266
Tssr73849 7 101836935 to 101836988 53 - TSS region transcription start site region 73849
Tssr68267 7 101837063 to 101837094 31 + TSS region transcription start site region 68267
Tssr73850 7 101837735 to 101837768 33 - TSS region transcription start site region 73850
Tssr73851 7 101837776 to 101837832 56 - TSS region transcription start site region 73851
Tssr68268 7 101837838 to 101837897 59 + TSS region transcription start site region 68268
Tssr73852 7 101837875 to 101837958 83 - TSS region transcription start site region 73852
Tssr73853 7 101837999 to 101838014 15 - TSS region transcription start site region 73853
Folr2 7 101839988 to 101857190 17202 - protein coding gene folate receptor 2 (fetal)
Tssr73854 7 101845267 to 101845276 9 - TSS region transcription start site region 73854
Tssr73855 7 101845300 to 101845339 39 - TSS region transcription start site region 73855
Tssr2352 7 101845345 to 101845348 3 - TSS region transcription start site region 2352
Gm45319 7 101852959 to 101853276 317 + pseudogene predicted gene 45319
Folr1 7 101858331 to 101870788 12457 - protein coding gene folate receptor 1 (adult)
Tssr68269 7 101863743 to 101863771 28 + TSS region transcription start site region 68269
Tssr68270 7 101863781 to 101863793 12 + TSS region transcription start site region 68270
Tssr73856 7 101864093 to 101864156 63 - TSS region transcription start site region 73856
Tssr73857 7 101864160 to 101864168 8 - TSS region transcription start site region 73857
Tssr73858 7 101866770 to 101866781 11 - TSS region transcription start site region 73858
Tssr73859 7 101867297 to 101867338 41 - TSS region transcription start site region 73859
Tssr73860 7 101867391 to 101867420 29 - TSS region transcription start site region 73860
Tssr73861 7 101868447 to 101868498 51 - TSS region transcription start site region 73861
Tssr73862 7 101868509 to 101868522 13 - TSS region transcription start site region 73862
Tssr73863 7 101868672 to 101868700 28 - TSS region transcription start site region 73863
Tssr73864 7 101868724 to 101868725 1 - TSS region transcription start site region 73864
Tssr73865 7 101869012 to 101869023 11 - TSS region transcription start site region 73865
Tssr73866 7 101869034 to 101869073 39 - TSS region transcription start site region 73866
Tssr73867 7 101869206 to 101869230 24 - TSS region transcription start site region 73867
Tssr73868 7 101869234 to 101869256 22 - TSS region transcription start site region 73868
Tssr73869 7 101869257 to 101869277 20 - TSS region transcription start site region 73869
Tssr73870 7 101869292 to 101869302 10 - TSS region transcription start site region 73870
Tssr73871 7 101869307 to 101869344 37 - TSS region transcription start site region 73871
Tssr73872 7 101869349 to 101869358 9 - TSS region transcription start site region 73872
Tssr73873 7 101870606 to 101870612 6 - TSS region transcription start site region 73873
Tssr73874 7 101870631 to 101870646 15 - TSS region transcription start site region 73874
Tssr73875 7 101870657 to 101870676 19 - TSS region transcription start site region 73875
Tssr73876 7 101870687 to 101870707 20 - TSS region transcription start site region 73876
Tssr73877 7 101870711 to 101870756 45 - TSS region transcription start site region 73877
Tssr73878 7 101870766 to 101870777 11 - TSS region transcription start site region 73878
Tssr73879 7 101870778 to 101870787 9 - TSS region transcription start site region 73879
Tssr73880 7 101870801 to 101870807 6 - TSS region transcription start site region 73880
Gm35597 7 101870860 to 101879577 8717 + lncRNA gene predicted gene, 35597
Tssr68271 7 101871521 to 101871533 12 + TSS region transcription start site region 68271
Tssr68272 7 101871540 to 101871551 11 + TSS region transcription start site region 68272
Tssr68273 7 101871590 to 101871612 22 + TSS region transcription start site region 68273