Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100974872-101794887

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156 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19493 7 100974297 to 100974895 598 CpG island CpG island 19493
Tssr73819 7 100979232 to 100979264 32 - TSS region transcription start site region 73819
Tssr73820 7 100987227 to 100987236 9 - TSS region transcription start site region 73820
P2ry2 7 100996568 to 101012053 15485 - protein coding gene purinergic receptor P2Y, G-protein coupled 2
Cpgi19494 7 100998051 to 100999091 1040 CpG island CpG island 19494
Tssr73821 7 101007797 to 101007807 10 - TSS region transcription start site region 73821
Cpgi19495 7 101011448 to 101012496 1048 CpG island CpG island 19495
Tssr73822 7 101011984 to 101012004 20 - TSS region transcription start site region 73822
Tssr73823 7 101012014 to 101012023 9 - TSS region transcription start site region 73823
Tssr2348 7 101012128 to 101012168 40 + TSS region transcription start site region 2348
Tssr73824 7 101012196 to 101012246 50 - TSS region transcription start site region 73824
Gm45070 7 101018623 to 101018868 245 - pseudogene predicted gene 45070
D7Mit203 7 101020903 to 101021043 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 203
Tssr68186 7 101052962 to 101052964 2 + TSS region transcription start site region 68186
Cpgi19496 7 101061263 to 101061704 441 CpG island CpG island 19496
Gm5735 7 101061309 to 101061475 166 - pseudogene predicted gene 5735
Tssr68187 7 101092828 to 101092859 31 + TSS region transcription start site region 68187
Tssr68188 7 101092875 to 101092882 7 + TSS region transcription start site region 68188
Cpgi19497 7 101107676 to 101109796 2120 CpG island CpG island 19497
Tssr68189 7 101108464 to 101108503 39 + TSS region transcription start site region 68189
Tssr68190 7 101108519 to 101108546 27 + TSS region transcription start site region 68190
Tssr68191 7 101108548 to 101108579 31 + TSS region transcription start site region 68191
Tssr68192 7 101108600 to 101108642 42 + TSS region transcription start site region 68192
Fchsd2 7 101108711 to 101284405 175694 + protein coding gene FCH and double SH3 domains 2
Tssr68193 7 101108740 to 101108753 13 + TSS region transcription start site region 68193
Tssr68194 7 101108768 to 101108783 15 + TSS region transcription start site region 68194
Tssr68195 7 101108788 to 101108811 23 + TSS region transcription start site region 68195
Tssr68196 7 101109313 to 101109323 10 + TSS region transcription start site region 68196
Tssr68197 7 101110735 to 101110747 12 + TSS region transcription start site region 68197
Tssr2349 7 101111995 to 101112029 34 + TSS region transcription start site region 2349
6030496E16Rik 7 101113551 to 101117796 4245 unclassified gene RIKEN cDNA 6030496E16 gene
Tssr2350 7 101144497 to 101144502 5 + TSS region transcription start site region 2350
Tssr68198 7 101148146 to 101148171 25 + TSS region transcription start site region 68198
Gm6341 7 101154645 to 101155055 410 - pseudogene predicted pseudogene 6341
Tssr68199 7 101163029 to 101163037 8 + TSS region transcription start site region 68199
Tssr68200 7 101164195 to 101164200 5 + TSS region transcription start site region 68200
D7Mit126 7 101201127 to 101201300 173 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 126
Tssr68201 7 101201168 to 101201173 5 + TSS region transcription start site region 68201
Tssr68202 7 101205395 to 101205407 12 + TSS region transcription start site region 68202
6430502G17Rik 7 101207664 to 101211024 3360 unclassified gene RIKEN cDNA 6430502G17 gene
Tssr68203 7 101214221 to 101214231 10 + TSS region transcription start site region 68203
Tssr68204 7 101219282 to 101219317 35 + TSS region transcription start site region 68204
Tssr68205 7 101223761 to 101223771 10 + TSS region transcription start site region 68205
Gm47324 7 101238218 to 101239278 1060 + pseudogene predicted gene, 47324
Tssr68206 7 101241056 to 101241061 5 + TSS region transcription start site region 68206
Atg16l2 7 101286325 to 101302267 15942 - protein coding gene autophagy related 16-like 2 (S. cerevisiae)
Tssr73825 7 101293479 to 101293483 4 - TSS region transcription start site region 73825
Cpgi19498 7 101296565 to 101297311 746 CpG island CpG island 19498
Cpgi19499 7 101301270 to 101302368 1098 CpG island CpG island 19499
Tssr68207 7 101301421 to 101301433 12 + TSS region transcription start site region 68207
Tssr73826 7 101301657 to 101301671 14 - TSS region transcription start site region 73826
Tssr73827 7 101301683 to 101301697 14 - TSS region transcription start site region 73827
Tssr73828 7 101301699 to 101301711 12 - TSS region transcription start site region 73828
Tssr73829 7 101301723 to 101301744 21 - TSS region transcription start site region 73829
Tssr68208 7 101301868 to 101301901 33 + TSS region transcription start site region 68208
Tssr73830 7 101302020 to 101302082 62 - TSS region transcription start site region 73830
Cpgi19500 7 101310459 to 101311024 565 CpG island CpG island 19500
Tssr68209 7 101317052 to 101317057 5 + TSS region transcription start site region 68209
Tssr68210 7 101317073 to 101317132 59 + TSS region transcription start site region 68210
Stard10 7 101317091 to 101346312 29221 + protein coding gene START domain containing 10
Gm20476 7 101317724 to 101326231 8507 - antisense lncRNA gene predicted gene 20476
Tssr68211 7 101320626 to 101320637 11 + TSS region transcription start site region 68211
Cpgi19501 7 101320716 to 101322201 1485 CpG island CpG island 19501
Tssr68212 7 101321079 to 101321134 55 + TSS region transcription start site region 68212
Tssr68213 7 101321138 to 101321149 11 + TSS region transcription start site region 68213
Tssr68214 7 101321230 to 101321320 90 + TSS region transcription start site region 68214
Tssr68215 7 101321703 to 101321790 87 + TSS region transcription start site region 68215
Tssr68216 7 101321858 to 101321869 11 + TSS region transcription start site region 68216
Tssr68217 7 101324402 to 101324405 3 + TSS region transcription start site region 68217
Tssr68218 7 101330353 to 101330368 15 + TSS region transcription start site region 68218
Tssr68219 7 101332857 to 101332859 2 + TSS region transcription start site region 68219
Gm45344 7 101338127 to 101338467 340 + pseudogene predicted gene 45344
Tssr68220 7 101345968 to 101345977 9 + TSS region transcription start site region 68220
Gm45620 7 101347409 to 101347984 575 - lincRNA gene predicted gene 45620
Cpgi19502 7 101347785 to 101348569 784 CpG island CpG island 19502
Tssr73831 7 101347984 to 101348014 30 - TSS region transcription start site region 73831
Tssr68221 7 101348061 to 101348128 67 + TSS region transcription start site region 68221
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Tssr68222 7 101348140 to 101348149 9 + TSS region transcription start site region 68222
Gm35219 7 101348208 to 101355423 7215 - lncRNA gene predicted gene, 35219
Gm45548 7 101351273 to 101354439 3166 - unclassified gene predicted gene 45548
Tssr73832 7 101354415 to 101354422 7 - TSS region transcription start site region 73832
Tssr73833 7 101354431 to 101354446 15 - TSS region transcription start site region 73833
D7Mit138 7 101357379 to 101357492 113 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 138
Tssr68223 7 101361250 to 101361287 37 + TSS region transcription start site region 68223
Tssr68224 7 101361465 to 101361507 42 + TSS region transcription start site region 68224
Tssr73834 7 101361864 to 101361888 24 - TSS region transcription start site region 73834
Tssr73835 7 101361913 to 101361930 17 - TSS region transcription start site region 73835
Tssr68225 7 101361967 to 101361978 11 + TSS region transcription start site region 68225
Tssr68226 7 101361979 to 101361988 9 + TSS region transcription start site region 68226
Tssr68227 7 101361997 to 101362044 47 + TSS region transcription start site region 68227
Tssr68228 7 101362054 to 101362069 15 + TSS region transcription start site region 68228
Tssr73836 7 101362770 to 101362780 10 - TSS region transcription start site region 73836
Tssr73837 7 101362813 to 101362818 5 - TSS region transcription start site region 73837
Tssr73838 7 101362871 to 101362884 13 - TSS region transcription start site region 73838
Tssr68229 7 101363043 to 101363090 47 + TSS region transcription start site region 68229
Tssr68230 7 101366572 to 101366593 21 + TSS region transcription start site region 68230
Cpgi19503 7 101373066 to 101373277 211 CpG island CpG island 19503
Tssr68231 7 101373199 to 101373231 32 + TSS region transcription start site region 68231
Tssr68232 7 101373271 to 101373284 13 + TSS region transcription start site region 68232
Tssr68233 7 101373309 to 101373341 32 + TSS region transcription start site region 68233
Tssr68234 7 101378110 to 101378133 23 + TSS region transcription start site region 68234
Tssr68235 7 101378183 to 101378210 27 + TSS region transcription start site region 68235
Tssr73839 7 101379884 to 101379898 14 - TSS region transcription start site region 73839
Tssr68236 7 101382814 to 101382840 26 + TSS region transcription start site region 68236
Tssr68237 7 101383947 to 101383962 15 + TSS region transcription start site region 68237
Tssr68238 7 101383969 to 101383976 7 + TSS region transcription start site region 68238
Tssr68239 7 101383985 to 101384000 15 + TSS region transcription start site region 68239
Tssr68240 7 101384011 to 101384038 27 + TSS region transcription start site region 68240
Tssr68241 7 101384050 to 101384075 25 + TSS region transcription start site region 68241
Tssr68242 7 101384872 to 101384887 15 + TSS region transcription start site region 68242
Tssr68243 7 101384888 to 101384911 23 + TSS region transcription start site region 68243
Tssr68244 7 101385523 to 101385552 29 + TSS region transcription start site region 68244
Tssr68245 7 101386785 to 101386800 15 + TSS region transcription start site region 68245
Tssr68246 7 101394361 to 101394436 75 + TSS region transcription start site region 68246
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261
Tssr68262 7 101763517 to 101763524 7 + TSS region transcription start site region 68262
Tssr68263 7 101765492 to 101765493 1 + TSS region transcription start site region 68263
Gm45380 7 101790536 to 101790850 314 + pseudogene predicted gene 45380