Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100537140-101327200

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196 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19485 7 100536863 to 100537324 461 CpG island CpG island 19485
Coa4 7 100537100 to 100540372 3272 + protein coding gene cytochrome c oxidase assembly factor 4
Tssr68156 7 100537170 to 100537179 9 + TSS region transcription start site region 68156
Tssr68157 7 100537192 to 100537221 29 + TSS region transcription start site region 68157
Tssr73755 7 100539316 to 100539326 10 - TSS region transcription start site region 73755
Tssr73756 7 100539589 to 100539598 9 - TSS region transcription start site region 73756
Tssr68158 7 100539899 to 100539927 28 + TSS region transcription start site region 68158
Gm39059 7 100542338 to 100543180 842 - lincRNA gene predicted gene, 39059
Mrpl48 7 100549117 to 100607996 58879 - protein coding gene mitochondrial ribosomal protein L48
Tssr73757 7 100550745 to 100550754 9 - TSS region transcription start site region 73757
Gm44648 7 100571922 to 100572250 328 + pseudogene predicted gene 44648
Cox20b 7 100580267 to 100580619 352 + pseudogene cytochrome c oxidase assembly protein 20B
Tssr68159 7 100580278 to 100580302 24 + TSS region transcription start site region 68159
Cpgi19486 7 100582715 to 100583183 468 CpG island CpG island 19486
Tssr73758 7 100583072 to 100583124 52 - TSS region transcription start site region 73758
Tssr73759 7 100589945 to 100589993 48 - TSS region transcription start site region 73759
Tssr73760 7 100590852 to 100590862 10 - TSS region transcription start site region 73760
Cpgi19487 7 100607071 to 100608710 1639 CpG island CpG island 19487
Tssr68160 7 100607556 to 100607618 62 + TSS region transcription start site region 68160
Rab6a 7 100607586 to 100641268 33682 + protein coding gene RAB6A, member RAS oncogene family
Tssr73761 7 100607658 to 100607692 34 - TSS region transcription start site region 73761
Tssr68161 7 100607660 to 100607823 163 + TSS region transcription start site region 68161
Tssr68162 7 100607836 to 100607854 18 + TSS region transcription start site region 68162
Tssr68163 7 100607887 to 100607899 12 + TSS region transcription start site region 68163
Tssr68164 7 100607912 to 100607992 80 + TSS region transcription start site region 68164
Tssr73762 7 100608229 to 100608268 39 - TSS region transcription start site region 73762
Tssr73763 7 100608293 to 100608308 15 - TSS region transcription start site region 73763
D930046H04Rik 7 100618772 to 100621256 2484 unclassified non-coding RNA gene RIKEN cDNA D930046H04 gene
Gm14382 7 100624518 to 100624954 436 + pseudogene predicted gene 14382
Tssr68165 7 100639304 to 100639313 9 + TSS region transcription start site region 68165
Tssr68166 7 100640560 to 100640583 23 + TSS region transcription start site region 68166
Plekhb1 7 100643896 to 100662394 18498 - protein coding gene pleckstrin homology domain containing, family B (evectins) member 1
Tssr73764 7 100644918 to 100644931 13 - TSS region transcription start site region 73764
Tssr73765 7 100653396 to 100653401 5 - TSS region transcription start site region 73765
Tssr73766 7 100653951 to 100653965 14 - TSS region transcription start site region 73766
Tssr73767 7 100656831 to 100656834 3 - TSS region transcription start site region 73767
Tssr73768 7 100656857 to 100656868 11 - TSS region transcription start site region 73768
Tssr73769 7 100656893 to 100656914 21 - TSS region transcription start site region 73769
Tssr73770 7 100656916 to 100656942 26 - TSS region transcription start site region 73770
Tssr73771 7 100656959 to 100656985 26 - TSS region transcription start site region 73771
Tssr73772 7 100658345 to 100658356 11 - TSS region transcription start site region 73772
Tssr73773 7 100658369 to 100658386 17 - TSS region transcription start site region 73773
Tssr73774 7 100658394 to 100658451 57 - TSS region transcription start site region 73774
Tssr2343 7 100658406 to 100658411 5 + TSS region transcription start site region 2343
Tssr73775 7 100662331 to 100662362 31 - TSS region transcription start site region 73775
Tssr73776 7 100662376 to 100662395 19 - TSS region transcription start site region 73776
Tssr73777 7 100662431 to 100662440 9 - TSS region transcription start site region 73777
Tssr73778 7 100664303 to 100664313 10 - TSS region transcription start site region 73778
Gm35082 7 100675088 to 100677760 2672 + lincRNA gene predicted gene, 35082
Tssr2344 7 100681302 to 100681310 8 + TSS region transcription start site region 2344
Tssr73779 7 100706274 to 100706284 10 - TSS region transcription start site region 73779
Cpgi19488 7 100706365 to 100707144 779 CpG island CpG island 19488
Tssr68167 7 100706606 to 100706619 13 + TSS region transcription start site region 68167
Tssr68168 7 100706623 to 100706668 45 + TSS region transcription start site region 68168
Fam168a 7 100706640 to 100841646 135006 + protein coding gene family with sequence similarity 168, member A
Tssr68169 7 100706669 to 100706695 26 + TSS region transcription start site region 68169
Tssr68170 7 100706705 to 100706731 26 + TSS region transcription start site region 68170
Tssr2345 7 100706737 to 100706762 25 + TSS region transcription start site region 2345
Tssr68171 7 100706773 to 100706785 12 + TSS region transcription start site region 68171
Tssr68172 7 100706798 to 100706809 11 + TSS region transcription start site region 68172
Tssr2346 7 100706812 to 100706842 30 + TSS region transcription start site region 2346
Tssr2347 7 100706848 to 100706854 6 + TSS region transcription start site region 2347
Gm45209 7 100738052 to 100738628 576 - pseudogene predicted gene 45209
Gm3200 7 100760805 to 100761806 1001 - pseudogene predicted pseudogene 3200
Tssr68173 7 100786341 to 100786374 33 + TSS region transcription start site region 68173
Tssr68174 7 100786852 to 100786856 4 + TSS region transcription start site region 68174
Tssr68175 7 100806607 to 100806619 12 + TSS region transcription start site region 68175
Gm44953 7 100811352 to 100812637 1285 + unclassified gene predicted gene 44953
Tssr68176 7 100816150 to 100816169 19 + TSS region transcription start site region 68176
Tssr68177 7 100831363 to 100831399 36 + TSS region transcription start site region 68177
Tssr68178 7 100834004 to 100834019 15 + TSS region transcription start site region 68178
Tssr68179 7 100839032 to 100839055 23 + TSS region transcription start site region 68179
Relt 7 100845847 to 100863446 17599 - protein coding gene RELT tumor necrosis factor receptor
Tssr73780 7 100855403 to 100855440 37 - TSS region transcription start site region 73780
Tssr73781 7 100855891 to 100855903 12 - TSS region transcription start site region 73781
Tssr73782 7 100856289 to 100856308 19 - TSS region transcription start site region 73782
Tssr73783 7 100856312 to 100856326 14 - TSS region transcription start site region 73783
Cpgi19489 7 100862526 to 100863638 1112 CpG island CpG island 19489
Tssr68180 7 100862736 to 100862741 5 + TSS region transcription start site region 68180
Tssr73784 7 100863353 to 100863368 15 - TSS region transcription start site region 73784
Tssr73785 7 100863373 to 100863426 53 - TSS region transcription start site region 73785
Arhgef17 7 100869752 to 100932107 62355 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 17
D7Mit323 7 100875936 to 100876050 114 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 323
Mir3102 7 100882306 to 100882409 103 - miRNA gene microRNA 3102
Cpgi19490 7 100893974 to 100895101 1127 CpG island CpG island 19490
Tssr68181 7 100894501 to 100894503 2 + TSS region transcription start site region 68181
Tssr73786 7 100894573 to 100894584 11 - TSS region transcription start site region 73786
Tssr73787 7 100894608 to 100894630 22 - TSS region transcription start site region 73787
Tssr73788 7 100894684 to 100894729 45 - TSS region transcription start site region 73788
Tssr73789 7 100894745 to 100894766 21 - TSS region transcription start site region 73789
Tssr73790 7 100928604 to 100928624 20 - TSS region transcription start site region 73790
Cpgi19491 7 100930358 to 100933063 2705 CpG island CpG island 19491
Tssr73791 7 100930912 to 100930954 42 - TSS region transcription start site region 73791
Tssr73792 7 100930961 to 100930974 13 - TSS region transcription start site region 73792
Tssr73793 7 100931482 to 100931533 51 - TSS region transcription start site region 73793
Tssr73794 7 100932140 to 100932200 60 - TSS region transcription start site region 73794
Tssr73795 7 100932534 to 100932570 36 - TSS region transcription start site region 73795
P2ry6 7 100937630 to 100974649 37019 - protein coding gene pyrimidinergic receptor P2Y, G-protein coupled, 6
Cpgi19492 7 100938195 to 100939262 1067 CpG island CpG island 19492
Tssr73796 7 100938210 to 100938226 16 - TSS region transcription start site region 73796
Tssr73797 7 100938282 to 100938291 9 - TSS region transcription start site region 73797
Tssr73798 7 100938431 to 100938445 14 - TSS region transcription start site region 73798
Tssr73799 7 100938799 to 100938819 20 - TSS region transcription start site region 73799
Tssr73800 7 100938828 to 100938890 62 - TSS region transcription start site region 73800
Tssr68182 7 100938880 to 100938916 36 + TSS region transcription start site region 68182
Tssr73801 7 100938897 to 100939016 119 - TSS region transcription start site region 73801
Tssr73802 7 100939027 to 100939049 22 - TSS region transcription start site region 73802
Tssr73803 7 100939106 to 100939125 19 - TSS region transcription start site region 73803
Tssr73804 7 100939128 to 100939144 16 - TSS region transcription start site region 73804
Tssr73805 7 100939952 to 100939971 19 - TSS region transcription start site region 73805
Tssr68183 7 100943547 to 100943557 10 + TSS region transcription start site region 68183
Tssr68184 7 100943609 to 100943621 12 + TSS region transcription start site region 68184
Tssr73806 7 100947530 to 100947557 27 - TSS region transcription start site region 73806
Tssr73807 7 100947608 to 100947642 34 - TSS region transcription start site region 73807
Tssr68185 7 100950817 to 100950828 11 + TSS region transcription start site region 68185
Gm44545 7 100950817 to 100951562 745 + unclassified gene predicted gene 44545
Tssr73808 7 100954718 to 100954734 16 - TSS region transcription start site region 73808
Tssr73809 7 100955039 to 100955050 11 - TSS region transcription start site region 73809
Tssr73810 7 100956118 to 100956132 14 - TSS region transcription start site region 73810
Tssr73811 7 100958414 to 100958418 4 - TSS region transcription start site region 73811
Tssr73812 7 100959650 to 100959694 44 - TSS region transcription start site region 73812
Tssr73813 7 100964274 to 100964288 14 - TSS region transcription start site region 73813
Tssr73814 7 100964306 to 100964341 35 - TSS region transcription start site region 73814
Tssr73815 7 100964348 to 100964369 21 - TSS region transcription start site region 73815
Tssr73816 7 100964371 to 100964395 24 - TSS region transcription start site region 73816
Tssr73817 7 100964441 to 100964452 11 - TSS region transcription start site region 73817
Cpgi19493 7 100974297 to 100974895 598 CpG island CpG island 19493
Tssr73818 7 100974644 to 100974669 25 - TSS region transcription start site region 73818
Tssr73819 7 100979232 to 100979264 32 - TSS region transcription start site region 73819
Tssr73820 7 100987227 to 100987236 9 - TSS region transcription start site region 73820
P2ry2 7 100996568 to 101012053 15485 - protein coding gene purinergic receptor P2Y, G-protein coupled 2
Cpgi19494 7 100998051 to 100999091 1040 CpG island CpG island 19494
Tssr73821 7 101007797 to 101007807 10 - TSS region transcription start site region 73821
Cpgi19495 7 101011448 to 101012496 1048 CpG island CpG island 19495
Tssr73822 7 101011984 to 101012004 20 - TSS region transcription start site region 73822
Tssr73823 7 101012014 to 101012023 9 - TSS region transcription start site region 73823
Tssr2348 7 101012128 to 101012168 40 + TSS region transcription start site region 2348
Tssr73824 7 101012196 to 101012246 50 - TSS region transcription start site region 73824
Gm45070 7 101018623 to 101018868 245 - pseudogene predicted gene 45070
D7Mit203 7 101020903 to 101021043 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 203
Tssr68186 7 101052962 to 101052964 2 + TSS region transcription start site region 68186
Cpgi19496 7 101061263 to 101061704 441 CpG island CpG island 19496
Gm5735 7 101061309 to 101061475 166 - pseudogene predicted gene 5735
Tssr68187 7 101092828 to 101092859 31 + TSS region transcription start site region 68187
Tssr68188 7 101092875 to 101092882 7 + TSS region transcription start site region 68188
Cpgi19497 7 101107676 to 101109796 2120 CpG island CpG island 19497
Tssr68189 7 101108464 to 101108503 39 + TSS region transcription start site region 68189
Tssr68190 7 101108519 to 101108546 27 + TSS region transcription start site region 68190
Tssr68191 7 101108548 to 101108579 31 + TSS region transcription start site region 68191
Tssr68192 7 101108600 to 101108642 42 + TSS region transcription start site region 68192
Fchsd2 7 101108711 to 101284405 175694 + protein coding gene FCH and double SH3 domains 2
Tssr68193 7 101108740 to 101108753 13 + TSS region transcription start site region 68193
Tssr68194 7 101108768 to 101108783 15 + TSS region transcription start site region 68194
Tssr68195 7 101108788 to 101108811 23 + TSS region transcription start site region 68195
Tssr68196 7 101109313 to 101109323 10 + TSS region transcription start site region 68196
Tssr68197 7 101110735 to 101110747 12 + TSS region transcription start site region 68197
Tssr2349 7 101111995 to 101112029 34 + TSS region transcription start site region 2349
6030496E16Rik 7 101113551 to 101117796 4245 unclassified gene RIKEN cDNA 6030496E16 gene
Tssr2350 7 101144497 to 101144502 5 + TSS region transcription start site region 2350
Tssr68198 7 101148146 to 101148171 25 + TSS region transcription start site region 68198
Gm6341 7 101154645 to 101155055 410 - pseudogene predicted pseudogene 6341
Tssr68199 7 101163029 to 101163037 8 + TSS region transcription start site region 68199
Tssr68200 7 101164195 to 101164200 5 + TSS region transcription start site region 68200
D7Mit126 7 101201127 to 101201300 173 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 126
Tssr68201 7 101201168 to 101201173 5 + TSS region transcription start site region 68201
Tssr68202 7 101205395 to 101205407 12 + TSS region transcription start site region 68202
6430502G17Rik 7 101207664 to 101211024 3360 unclassified gene RIKEN cDNA 6430502G17 gene
Tssr68203 7 101214221 to 101214231 10 + TSS region transcription start site region 68203
Tssr68204 7 101219282 to 101219317 35 + TSS region transcription start site region 68204
Tssr68205 7 101223761 to 101223771 10 + TSS region transcription start site region 68205
Gm47324 7 101238218 to 101239278 1060 + pseudogene predicted gene, 47324
Tssr68206 7 101241056 to 101241061 5 + TSS region transcription start site region 68206
Atg16l2 7 101286325 to 101302267 15942 - protein coding gene autophagy related 16-like 2 (S. cerevisiae)
Tssr73825 7 101293479 to 101293483 4 - TSS region transcription start site region 73825
Cpgi19498 7 101296565 to 101297311 746 CpG island CpG island 19498
Cpgi19499 7 101301270 to 101302368 1098 CpG island CpG island 19499
Tssr68207 7 101301421 to 101301433 12 + TSS region transcription start site region 68207
Tssr73826 7 101301657 to 101301671 14 - TSS region transcription start site region 73826
Tssr73827 7 101301683 to 101301697 14 - TSS region transcription start site region 73827
Tssr73828 7 101301699 to 101301711 12 - TSS region transcription start site region 73828
Tssr73829 7 101301723 to 101301744 21 - TSS region transcription start site region 73829
Tssr68208 7 101301868 to 101301901 33 + TSS region transcription start site region 68208
Tssr73830 7 101302020 to 101302082 62 - TSS region transcription start site region 73830
Cpgi19500 7 101310459 to 101311024 565 CpG island CpG island 19500
Tssr68209 7 101317052 to 101317057 5 + TSS region transcription start site region 68209
Tssr68210 7 101317073 to 101317132 59 + TSS region transcription start site region 68210
Stard10 7 101317091 to 101346312 29221 + protein coding gene START domain containing 10
Gm20476 7 101317724 to 101326231 8507 - antisense lncRNA gene predicted gene 20476
Tssr68211 7 101320626 to 101320637 11 + TSS region transcription start site region 68211
Cpgi19501 7 101320716 to 101322201 1485 CpG island CpG island 19501
Tssr68212 7 101321079 to 101321134 55 + TSS region transcription start site region 68212
Tssr68213 7 101321138 to 101321149 11 + TSS region transcription start site region 68213
Tssr68214 7 101321230 to 101321320 90 + TSS region transcription start site region 68214
Tssr68215 7 101321703 to 101321790 87 + TSS region transcription start site region 68215
Tssr68216 7 101321858 to 101321869 11 + TSS region transcription start site region 68216
Tssr68217 7 101324402 to 101324405 3 + TSS region transcription start site region 68217