Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100501365-100912144

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103 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnajb13 7 100503011 to 100514815 11804 - protein coding gene DnaJ heat shock protein family (Hsp40) member B13
Stmm1 7 100505707 to 107683208 7177501 QTL skin tumor modifier of MSM 1
D7Mit96 7 100505707 to 100505782 75 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 96
D7Dcr43 7 100505709 to 100505800 91 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 43
Tssr73750 7 100511780 to 100511801 21 - TSS region transcription start site region 73750
Tssr73751 7 100514763 to 100514785 22 - TSS region transcription start site region 73751
Tssr73752 7 100514789 to 100514799 10 - TSS region transcription start site region 73752
Tssr73753 7 100514800 to 100514822 22 - TSS region transcription start site region 73753
Tssr68154 7 100523985 to 100523997 12 + TSS region transcription start site region 68154
Gm8463 7 100524016 to 100524628 612 + pseudogene predicted gene 8463
Tssr73754 7 100533459 to 100533481 22 - TSS region transcription start site region 73754
Gm39058 7 100535591 to 100536980 1389 - lncRNA gene predicted gene, 39058
Cpgi19485 7 100536863 to 100537324 461 CpG island CpG island 19485
Tssr68155 7 100537052 to 100537139 87 + TSS region transcription start site region 68155
Coa4 7 100537100 to 100540372 3272 + protein coding gene cytochrome c oxidase assembly factor 4
Tssr68156 7 100537170 to 100537179 9 + TSS region transcription start site region 68156
Tssr68157 7 100537192 to 100537221 29 + TSS region transcription start site region 68157
Tssr73755 7 100539316 to 100539326 10 - TSS region transcription start site region 73755
Tssr73756 7 100539589 to 100539598 9 - TSS region transcription start site region 73756
Tssr68158 7 100539899 to 100539927 28 + TSS region transcription start site region 68158
Gm39059 7 100542338 to 100543180 842 - lincRNA gene predicted gene, 39059
Mrpl48 7 100549117 to 100607996 58879 - protein coding gene mitochondrial ribosomal protein L48
Tssr73757 7 100550745 to 100550754 9 - TSS region transcription start site region 73757
Gm44648 7 100571922 to 100572250 328 + pseudogene predicted gene 44648
Cox20b 7 100580267 to 100580619 352 + pseudogene cytochrome c oxidase assembly protein 20B
Tssr68159 7 100580278 to 100580302 24 + TSS region transcription start site region 68159
Cpgi19486 7 100582715 to 100583183 468 CpG island CpG island 19486
Tssr73758 7 100583072 to 100583124 52 - TSS region transcription start site region 73758
Tssr73759 7 100589945 to 100589993 48 - TSS region transcription start site region 73759
Tssr73760 7 100590852 to 100590862 10 - TSS region transcription start site region 73760
Cpgi19487 7 100607071 to 100608710 1639 CpG island CpG island 19487
Tssr68160 7 100607556 to 100607618 62 + TSS region transcription start site region 68160
Rab6a 7 100607586 to 100641268 33682 + protein coding gene RAB6A, member RAS oncogene family
Tssr73761 7 100607658 to 100607692 34 - TSS region transcription start site region 73761
Tssr68161 7 100607660 to 100607823 163 + TSS region transcription start site region 68161
Tssr68162 7 100607836 to 100607854 18 + TSS region transcription start site region 68162
Tssr68163 7 100607887 to 100607899 12 + TSS region transcription start site region 68163
Tssr68164 7 100607912 to 100607992 80 + TSS region transcription start site region 68164
Tssr73762 7 100608229 to 100608268 39 - TSS region transcription start site region 73762
Tssr73763 7 100608293 to 100608308 15 - TSS region transcription start site region 73763
D930046H04Rik 7 100618772 to 100621256 2484 unclassified non-coding RNA gene RIKEN cDNA D930046H04 gene
Gm14382 7 100624518 to 100624954 436 + pseudogene predicted gene 14382
Tssr68165 7 100639304 to 100639313 9 + TSS region transcription start site region 68165
Tssr68166 7 100640560 to 100640583 23 + TSS region transcription start site region 68166
Plekhb1 7 100643896 to 100662394 18498 - protein coding gene pleckstrin homology domain containing, family B (evectins) member 1
Tssr73764 7 100644918 to 100644931 13 - TSS region transcription start site region 73764
Tssr73765 7 100653396 to 100653401 5 - TSS region transcription start site region 73765
Tssr73766 7 100653951 to 100653965 14 - TSS region transcription start site region 73766
Tssr73767 7 100656831 to 100656834 3 - TSS region transcription start site region 73767
Tssr73768 7 100656857 to 100656868 11 - TSS region transcription start site region 73768
Tssr73769 7 100656893 to 100656914 21 - TSS region transcription start site region 73769
Tssr73770 7 100656916 to 100656942 26 - TSS region transcription start site region 73770
Tssr73771 7 100656959 to 100656985 26 - TSS region transcription start site region 73771
Tssr73772 7 100658345 to 100658356 11 - TSS region transcription start site region 73772
Tssr73773 7 100658369 to 100658386 17 - TSS region transcription start site region 73773
Tssr73774 7 100658394 to 100658451 57 - TSS region transcription start site region 73774
Tssr2343 7 100658406 to 100658411 5 + TSS region transcription start site region 2343
Tssr73775 7 100662331 to 100662362 31 - TSS region transcription start site region 73775
Tssr73776 7 100662376 to 100662395 19 - TSS region transcription start site region 73776
Tssr73777 7 100662431 to 100662440 9 - TSS region transcription start site region 73777
Tssr73778 7 100664303 to 100664313 10 - TSS region transcription start site region 73778
Gm35082 7 100675088 to 100677760 2672 + lincRNA gene predicted gene, 35082
Tssr2344 7 100681302 to 100681310 8 + TSS region transcription start site region 2344
Tssr73779 7 100706274 to 100706284 10 - TSS region transcription start site region 73779
Cpgi19488 7 100706365 to 100707144 779 CpG island CpG island 19488
Tssr68167 7 100706606 to 100706619 13 + TSS region transcription start site region 68167
Tssr68168 7 100706623 to 100706668 45 + TSS region transcription start site region 68168
Fam168a 7 100706640 to 100841646 135006 + protein coding gene family with sequence similarity 168, member A
Tssr68169 7 100706669 to 100706695 26 + TSS region transcription start site region 68169
Tssr68170 7 100706705 to 100706731 26 + TSS region transcription start site region 68170
Tssr2345 7 100706737 to 100706762 25 + TSS region transcription start site region 2345
Tssr68171 7 100706773 to 100706785 12 + TSS region transcription start site region 68171
Tssr68172 7 100706798 to 100706809 11 + TSS region transcription start site region 68172
Tssr2346 7 100706812 to 100706842 30 + TSS region transcription start site region 2346
Tssr2347 7 100706848 to 100706854 6 + TSS region transcription start site region 2347
Gm45209 7 100738052 to 100738628 576 - pseudogene predicted gene 45209
Gm3200 7 100760805 to 100761806 1001 - pseudogene predicted pseudogene 3200
Tssr68173 7 100786341 to 100786374 33 + TSS region transcription start site region 68173
Tssr68174 7 100786852 to 100786856 4 + TSS region transcription start site region 68174
Tssr68175 7 100806607 to 100806619 12 + TSS region transcription start site region 68175
Gm44953 7 100811352 to 100812637 1285 + unclassified gene predicted gene 44953
Tssr68176 7 100816150 to 100816169 19 + TSS region transcription start site region 68176
Tssr68177 7 100831363 to 100831399 36 + TSS region transcription start site region 68177
Tssr68178 7 100834004 to 100834019 15 + TSS region transcription start site region 68178
Tssr68179 7 100839032 to 100839055 23 + TSS region transcription start site region 68179
Relt 7 100845847 to 100863446 17599 - protein coding gene RELT tumor necrosis factor receptor
Tssr73780 7 100855403 to 100855440 37 - TSS region transcription start site region 73780
Tssr73781 7 100855891 to 100855903 12 - TSS region transcription start site region 73781
Tssr73782 7 100856289 to 100856308 19 - TSS region transcription start site region 73782
Tssr73783 7 100856312 to 100856326 14 - TSS region transcription start site region 73783
Cpgi19489 7 100862526 to 100863638 1112 CpG island CpG island 19489
Tssr68180 7 100862736 to 100862741 5 + TSS region transcription start site region 68180
Tssr73784 7 100863353 to 100863368 15 - TSS region transcription start site region 73784
Tssr73785 7 100863373 to 100863426 53 - TSS region transcription start site region 73785
Arhgef17 7 100869752 to 100932107 62355 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 17
D7Mit323 7 100875936 to 100876050 114 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 323
Mir3102 7 100882306 to 100882409 103 - miRNA gene microRNA 3102
Cpgi19490 7 100893974 to 100895101 1127 CpG island CpG island 19490
Tssr68181 7 100894501 to 100894503 2 + TSS region transcription start site region 68181
Tssr73786 7 100894573 to 100894584 11 - TSS region transcription start site region 73786
Tssr73787 7 100894608 to 100894630 22 - TSS region transcription start site region 73787
Tssr73788 7 100894684 to 100894729 45 - TSS region transcription start site region 73788
Tssr73789 7 100894745 to 100894766 21 - TSS region transcription start site region 73789