Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100220038-100490076

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34877 7 100200776 to 100227209 26433 - lncRNA gene predicted gene, 34877
Cpgi19480 7 100227094 to 100228243 1149 CpG island CpG island 19480
Tssr68101 7 100227311 to 100227384 73 + TSS region transcription start site region 68101
Pgm2l1 7 100227394 to 100278868 51474 + protein coding gene phosphoglucomutase 2-like 1
Tssr68102 7 100227462 to 100227504 42 + TSS region transcription start site region 68102
Tssr68103 7 100227624 to 100227635 11 + TSS region transcription start site region 68103
Tssr68104 7 100227638 to 100227706 68 + TSS region transcription start site region 68104
Tssr68105 7 100227740 to 100227781 41 + TSS region transcription start site region 68105
Tssr68106 7 100227783 to 100227788 5 + TSS region transcription start site region 68106
Tssr68107 7 100235119 to 100235122 3 + TSS region transcription start site region 68107
Tssr68108 7 100264645 to 100264667 22 + TSS region transcription start site region 68108
Gpx2-ps1 7 100264675 to 100265245 570 + pseudogene glutathione peroxidase 2, pseudogene 1
Tssr68109 7 100276648 to 100276650 2 + TSS region transcription start site region 68109
Cpgi19481 7 100285162 to 100285876 714 CpG island CpG island 19481
Tssr68110 7 100285478 to 100285564 86 + TSS region transcription start site region 68110
P4ha3 7 100285520 to 100319699 34179 + protein coding gene procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
Tssr68111 7 100319030 to 100319048 18 + TSS region transcription start site region 68111
Tssr68112 7 100319094 to 100319105 11 + TSS region transcription start site region 68112
Tssr68113 7 100319249 to 100319272 23 + TSS region transcription start site region 68113
Tssr68114 7 100319404 to 100319433 29 + TSS region transcription start site region 68114
Ppme1 7 100326737 to 100371896 45159 - protein coding gene protein phosphatase methylesterase 1
Tssr73736 7 100355038 to 100355076 38 - TSS region transcription start site region 73736
Cpgi19482 7 100371587 to 100372498 911 CpG island CpG island 19482
Tssr73737 7 100371773 to 100371788 15 - TSS region transcription start site region 73737
Tssr73738 7 100371889 to 100371988 99 - TSS region transcription start site region 73738
Tssr68115 7 100372051 to 100372084 33 + TSS region transcription start site region 68115
Tssr68116 7 100372092 to 100372101 9 + TSS region transcription start site region 68116
Tssr68117 7 100372224 to 100372383 159 + TSS region transcription start site region 68117
C2cd3 7 100372233 to 100470152 97919 + protein coding gene C2 calcium-dependent domain containing 3
Tssr68118 7 100372388 to 100372424 36 + TSS region transcription start site region 68118
Gm44571 7 100381594 to 100382308 714 + pseudogene predicted gene 44571
Gm37716 7 100458460 to 100459406 946 + unclassified gene predicted gene, 37716
Gm10603 7 100463049 to 100467382 4333 - antisense lncRNA gene predicted gene 10603
Tssr73739 7 100467125 to 100467148 23 - TSS region transcription start site region 73739
Tssr73740 7 100467149 to 100467171 22 - TSS region transcription start site region 73740
Tssr73741 7 100467217 to 100467244 27 - TSS region transcription start site region 73741
Tssr73742 7 100467253 to 100467266 13 - TSS region transcription start site region 73742
Tssr68119 7 100472929 to 100472938 9 + TSS region transcription start site region 68119
Tssr68120 7 100472960 to 100472975 15 + TSS region transcription start site region 68120
Tssr68121 7 100472985 to 100472998 13 + TSS region transcription start site region 68121
Ucp3 7 100472991 to 100486432 13441 + protein coding gene uncoupling protein 3 (mitochondrial, proton carrier)
Tssr68122 7 100473016 to 100473024 8 + TSS region transcription start site region 68122
Cpgi19483 7 100479569 to 100480313 744 CpG island CpG island 19483