Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100177394-100328868

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kcne3	7	100176507 to 100184869	8362	+	protein coding gene	potassium voltage-gated channel, Isk-related subfamily, gene 3
Cpgi19479	7	100178548 to 100179205	657		CpG island	CpG island 19479
Tssr68099	7	100178679 to 100178704	25	+	TSS region	transcription start site region 68099
Tssr68100	7	100178732 to 100178739	7	+	TSS region	transcription start site region 68100
Gm45994	7	100189261 to 100192666	3405	-	lncRNA gene	predicted gene, 45994
Gm7067	7	100197111 to 100198348	1237	-	pseudogene	predicted gene 7067
Gm34877	7	100200776 to 100227209	26433	-	lncRNA gene	predicted gene, 34877
Cpgi19480	7	100227094 to 100228243	1149		CpG island	CpG island 19480
Tssr68101	7	100227311 to 100227384	73	+	TSS region	transcription start site region 68101
Pgm2l1	7	100227394 to 100278868	51474	+	protein coding gene	phosphoglucomutase 2-like 1
Tssr68102	7	100227462 to 100227504	42	+	TSS region	transcription start site region 68102
Tssr68103	7	100227624 to 100227635	11	+	TSS region	transcription start site region 68103
Tssr68104	7	100227638 to 100227706	68	+	TSS region	transcription start site region 68104
Tssr68105	7	100227740 to 100227781	41	+	TSS region	transcription start site region 68105
Tssr68106	7	100227783 to 100227788	5	+	TSS region	transcription start site region 68106
Tssr68107	7	100235119 to 100235122	3	+	TSS region	transcription start site region 68107
Tssr68108	7	100264645 to 100264667	22	+	TSS region	transcription start site region 68108
Gpx2-ps1	7	100264675 to 100265245	570	+	pseudogene	glutathione peroxidase 2, pseudogene 1
Tssr68109	7	100276648 to 100276650	2	+	TSS region	transcription start site region 68109
Cpgi19481	7	100285162 to 100285876	714		CpG island	CpG island 19481
Tssr68110	7	100285478 to 100285564	86	+	TSS region	transcription start site region 68110
P4ha3	7	100285520 to 100319699	34179	+	protein coding gene	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
Tssr68111	7	100319030 to 100319048	18	+	TSS region	transcription start site region 68111
Tssr68112	7	100319094 to 100319105	11	+	TSS region	transcription start site region 68112
Tssr68113	7	100319249 to 100319272	23	+	TSS region	transcription start site region 68113
Tssr68114	7	100319404 to 100319433	29	+	TSS region	transcription start site region 68114
Ppme1	7	100326737 to 100371896	45159	-	protein coding gene	protein phosphatase methylesterase 1