Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:99868423-100418814

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr57987 6 99877607 to 99877621 14 + TSS region transcription start site region 57987
Tpt1-ps3 6 99877816 to 99878334 518 - pseudogene tumor protein, translationally-controlled, pseudogene 3
Tssr57988 6 99877960 to 99877979 19 + TSS region transcription start site region 57988
Tssr62340 6 99878431 to 99878433 2 - TSS region transcription start site region 62340
Gm43067 6 99884400 to 99896845 12445 - lincRNA gene predicted gene 43067
Gm24248 6 99893226 to 99893547 321 - unclassified non-coding RNA gene predicted gene, 24248
Tssr62341 6 99896829 to 99896858 29 - TSS region transcription start site region 62341
Gm44442 6 99928248 to 99950931 22683 - lincRNA gene predicted gene, 44442
D6Mit147 6 99964082 to 99964224 142 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 147
D6Mit147.2 6 99964188 to 99964297 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 147.2
Gm33201 6 99966521 to 99987545 21024 - lincRNA gene predicted gene, 33201
D6Mit38 6 100057020 to 100057179 159 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 38
ssl 6 100057020 to 114282207 14225187 heritable phenotypic marker small swaying lethal
Gm33243 6 100061897 to 100087243 25346 + lncRNA gene predicted gene, 33243
Gm38866 6 100095025 to 100099614 4589 + lncRNA gene predicted gene, 38866
Gm33297 6 100099616 to 100101412 1796 + lncRNA gene predicted gene, 33297
2010109P13Rik 6 100143423 to 100143814 391 - lncRNA gene RIKEN cDNA 2010109P13 gene
Gm33448 6 100155134 to 100181732 26598 - lncRNA gene predicted gene, 33448
Cpgi17785 6 100155655 to 100156184 529 CpG island CpG island 17785
Cpgi17786 6 100163213 to 100163367 154 CpG island CpG island 17786
Cpgi17787 6 100170855 to 100171048 193 CpG island CpG island 17787
Tssr62342 6 100181717 to 100181733 16 - TSS region transcription start site region 62342
Gm33554 6 100196003 to 100201228 5225 + lncRNA gene predicted gene, 33554
Gm38867 6 100205328 to 100209141 3813 + lncRNA gene predicted gene, 38867
Rybp 6 100228565 to 100287358 58793 - protein coding gene RING1 and YY1 binding protein
Tssr62343 6 100244143 to 100244147 4 - TSS region transcription start site region 62343
Gm18422 6 100247229 to 100248261 1032 + pseudogene predicted gene, 18422
Gm44045 6 100256708 to 100259227 2519 - unclassified gene predicted gene, 44045
Gm44044 6 100272610 to 100273698 1088 - unclassified gene predicted gene, 44044
Tssr62344 6 100286323 to 100286327 4 - TSS region transcription start site region 62344
Cpgi17788 6 100286390 to 100288374 1984 CpG island CpG island 17788
Tssr62345 6 100287444 to 100287465 21 - TSS region transcription start site region 62345
Tssr62346 6 100287479 to 100287501 22 - TSS region transcription start site region 62346