Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:99619400-100161845

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20696 6 99257484 to 99666797 409313 - protein coding gene predicted gene 20696
Eif4e3 6 99625137 to 99666771 41634 - protein coding gene eukaryotic translation initiation factor 4E member 3
Tssr62329 6 99628942 to 99628945 3 - TSS region transcription start site region 62329
Tssr57981 6 99655665 to 99655676 11 + TSS region transcription start site region 57981
Gm44104 6 99658442 to 99662218 3776 - unclassified gene predicted gene, 44104
Tssr57982 6 99665868 to 99665877 9 + TSS region transcription start site region 57982
Cpgi17782 6 99666074 to 99667255 1181 CpG island CpG island 17782
Tssr62330 6 99666762 to 99666786 24 - TSS region transcription start site region 62330
Tssr62331 6 99666790 to 99666823 33 - TSS region transcription start site region 62331
Tssr62332 6 99667430 to 99667448 18 - TSS region transcription start site region 62332
Tssr62333 6 99669580 to 99669595 15 - TSS region transcription start site region 62333
Cpgi17783 6 99691663 to 99693878 2215 CpG island CpG island 17783
Tssr57983 6 99692280 to 99692323 43 + TSS region transcription start site region 57983
Tssr57984 6 99692362 to 99692377 15 + TSS region transcription start site region 57984
Gpr27 6 99692679 to 99693818 1139 + protein coding gene G protein-coupled receptor 27
Prok2 6 99711299 to 99726392 15093 - protein coding gene prokineticin 2
Tssr62334 6 99712167 to 99712174 7 - TSS region transcription start site region 62334
Cpgi17784 6 99725946 to 99727177 1231 CpG island CpG island 17784
Tssr62335 6 99726289 to 99726297 8 - TSS region transcription start site region 62335
Tssr62336 6 99726315 to 99726324 9 - TSS region transcription start site region 62336
Tssr62337 6 99726334 to 99726360 26 - TSS region transcription start site region 62337
Tssr62338 6 99726401 to 99726414 13 - TSS region transcription start site region 62338
Tssr62339 6 99726419 to 99726426 7 - TSS region transcription start site region 62339
Gm26748 6 99726785 to 99732609 5824 + antisense lncRNA gene predicted gene, 26748
Tssr1952 6 99750310 to 99750311 1 + TSS region transcription start site region 1952
Tssr57985 6 99770525 to 99770528 3 + TSS region transcription start site region 57985
Gm5314 6 99770657 to 99771122 465 + pseudogene predicted gene 5314
Tssr57986 6 99774939 to 99774952 13 + TSS region transcription start site region 57986
Tssr1953 6 99775019 to 99775020 1 + TSS region transcription start site region 1953
Gm6681 6 99839708 to 99840314 606 - pseudogene predicted gene 6681
Gm33143 6 99865071 to 99866771 1700 + lncRNA gene predicted gene, 33143
Tssr57987 6 99877607 to 99877621 14 + TSS region transcription start site region 57987
Tpt1-ps3 6 99877816 to 99878334 518 - pseudogene tumor protein, translationally-controlled, pseudogene 3
Tssr57988 6 99877960 to 99877979 19 + TSS region transcription start site region 57988
Tssr62340 6 99878431 to 99878433 2 - TSS region transcription start site region 62340
Gm43067 6 99884400 to 99896845 12445 - lincRNA gene predicted gene 43067
Gm24248 6 99893226 to 99893547 321 - unclassified non-coding RNA gene predicted gene, 24248
Tssr62341 6 99896829 to 99896858 29 - TSS region transcription start site region 62341
Gm44442 6 99928248 to 99950931 22683 - lincRNA gene predicted gene, 44442
D6Mit147 6 99964082 to 99964224 142 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 147
D6Mit147.2 6 99964188 to 99964297 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 147.2
Gm33201 6 99966521 to 99987545 21024 - lincRNA gene predicted gene, 33201
ssl 6 100057020 to 114282207 14225187 heritable phenotypic marker small swaying lethal
D6Mit38 6 100057020 to 100057179 159 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 38
Gm33243 6 100061897 to 100087243 25346 + lncRNA gene predicted gene, 33243
Gm38866 6 100095025 to 100099614 4589 + lncRNA gene predicted gene, 38866
Gm33297 6 100099616 to 100101412 1796 + lncRNA gene predicted gene, 33297
2010109P13Rik 6 100143423 to 100143814 391 - lncRNA gene RIKEN cDNA 2010109P13 gene
Gm33448 6 100155134 to 100181732 26598 - lncRNA gene predicted gene, 33448
Cpgi17785 6 100155655 to 100156184 529 CpG island CpG island 17785