Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:99357748-99703668

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Gm20696 6 99257484 to 99666797 409313 - protein coding gene predicted gene 20696
Tssr62303 6 99364282 to 99364286 4 - TSS region transcription start site region 62303
Tssr62304 6 99376021 to 99376036 15 - TSS region transcription start site region 62304
Tssr62305 6 99376044 to 99376065 21 - TSS region transcription start site region 62305
Gm20705 6 99384607 to 99388499 3892 - sense intronic lncRNA gene predicted gene 20705
Tssr62306 6 99402047 to 99402050 3 - TSS region transcription start site region 62306
Tssr62307 6 99404055 to 99404060 5 - TSS region transcription start site region 62307
Tssr62308 6 99429015 to 99429043 28 - TSS region transcription start site region 62308
Tssr57976 6 99433479 to 99433491 12 + TSS region transcription start site region 57976
Tssr62309 6 99435346 to 99435368 22 - TSS region transcription start site region 62309
Tssr62310 6 99435371 to 99435382 11 - TSS region transcription start site region 62310
Tssr62311 6 99484187 to 99484197 10 - TSS region transcription start site region 62311
Gm22328 6 99484591 to 99484702 111 - miRNA gene predicted gene, 22328
Tssr62312 6 99500204 to 99500207 3 - TSS region transcription start site region 62312
Tssr62313 6 99504790 to 99504798 8 - TSS region transcription start site region 62313
Tssr62314 6 99516866 to 99516870 4 - TSS region transcription start site region 62314
Tssr62315 6 99518637 to 99518640 3 - TSS region transcription start site region 62315
Cpgi17781 6 99520215 to 99523601 3386 CpG island CpG island 17781
Tssr62316 6 99520949 to 99521030 81 - TSS region transcription start site region 62316
Tssr62317 6 99521050 to 99521072 22 - TSS region transcription start site region 62317
Tssr62318 6 99521153 to 99521167 14 - TSS region transcription start site region 62318
Tssr62319 6 99521212 to 99521225 13 - TSS region transcription start site region 62319
Tssr62320 6 99521229 to 99521260 31 - TSS region transcription start site region 62320
Tssr57977 6 99521348 to 99521363 15 + TSS region transcription start site region 57977
Tssr57978 6 99521371 to 99521399 28 + TSS region transcription start site region 57978
Tssr57979 6 99521406 to 99521419 13 + TSS region transcription start site region 57979
Tssr62321 6 99521728 to 99521744 16 - TSS region transcription start site region 62321
Tssr57980 6 99522449 to 99522454 5 + TSS region transcription start site region 57980
Tssr62322 6 99522570 to 99522592 22 - TSS region transcription start site region 62322
Tssr62323 6 99522655 to 99522736 81 - TSS region transcription start site region 62323
Tssr62324 6 99523323 to 99523338 15 - TSS region transcription start site region 62324
Tssr62325 6 99523373 to 99523405 32 - TSS region transcription start site region 62325
Gm46991 6 99527748 to 99533668 5920 - lncRNA gene predicted gene, 46991
Tssr62326 6 99545813 to 99545814 1 - TSS region transcription start site region 62326
Gm24936 6 99575891 to 99576137 246 + unclassified non-coding RNA gene predicted gene, 24936
Tssr62327 6 99585256 to 99585260 4 - TSS region transcription start site region 62327
Tssr62328 6 99595000 to 99595011 11 - TSS region transcription start site region 62328
Tssr1951 6 99618889 to 99618915 26 - TSS region transcription start site region 1951
Eif4e3 6 99625137 to 99666771 41634 - protein coding gene eukaryotic translation initiation factor 4E member 3
Tssr62329 6 99628942 to 99628945 3 - TSS region transcription start site region 62329
Tssr57981 6 99655665 to 99655676 11 + TSS region transcription start site region 57981
Gm44104 6 99658442 to 99662218 3776 - unclassified gene predicted gene, 44104
Tssr57982 6 99665868 to 99665877 9 + TSS region transcription start site region 57982
Cpgi17782 6 99666074 to 99667255 1181 CpG island CpG island 17782
Tssr62330 6 99666762 to 99666786 24 - TSS region transcription start site region 62330
Tssr62331 6 99666790 to 99666823 33 - TSS region transcription start site region 62331
Tssr62332 6 99667430 to 99667448 18 - TSS region transcription start site region 62332
Tssr62333 6 99669580 to 99669595 15 - TSS region transcription start site region 62333
Cpgi17783 6 99691663 to 99693878 2215 CpG island CpG island 17783
Tssr57983 6 99692280 to 99692323 43 + TSS region transcription start site region 57983
Tssr57984 6 99692362 to 99692377 15 + TSS region transcription start site region 57984
Gpr27 6 99692679 to 99693818 1139 + protein coding gene G protein-coupled receptor 27