Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:99171021-99581036

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Tssr57966 6 99172390 to 99172422 32 + TSS region transcription start site region 57966
Tssr62280 6 99173307 to 99173318 11 - TSS region transcription start site region 62280
Tssr62281 6 99173327 to 99173365 38 - TSS region transcription start site region 62281
Tssr1950 6 99173377 to 99173388 11 - TSS region transcription start site region 1950
Tssr62282 6 99173592 to 99173597 5 - TSS region transcription start site region 62282
Tssr62283 6 99176359 to 99176367 8 - TSS region transcription start site region 62283
Tssr57967 6 99189082 to 99189106 24 + TSS region transcription start site region 57967
Tssr62284 6 99193038 to 99193041 3 - TSS region transcription start site region 62284
Tssr62285 6 99194509 to 99194513 4 - TSS region transcription start site region 62285
Tssr62286 6 99203127 to 99203131 4 - TSS region transcription start site region 62286
Tssr57968 6 99204438 to 99204459 21 + TSS region transcription start site region 57968
Tssr62287 6 99204462 to 99204470 8 - TSS region transcription start site region 62287
Tssr62288 6 99204488 to 99204497 9 - TSS region transcription start site region 62288
Tssr62289 6 99204955 to 99204974 19 - TSS region transcription start site region 62289
Tssr62290 6 99234306 to 99234310 4 - TSS region transcription start site region 62290
Gm20696 6 99257484 to 99666797 409313 - protein coding gene predicted gene 20696
Tssr57969 6 99262886 to 99262891 5 + TSS region transcription start site region 57969
Tssr57970 6 99262924 to 99262928 4 + TSS region transcription start site region 57970
Tssr57971 6 99264456 to 99264488 32 + TSS region transcription start site region 57971
Tssr57972 6 99265022 to 99265042 20 + TSS region transcription start site region 57972
Tssr62291 6 99266366 to 99266378 12 - TSS region transcription start site region 62291
Tssr62292 6 99266381 to 99266401 20 - TSS region transcription start site region 62292
Tssr62293 6 99266494 to 99266540 46 - TSS region transcription start site region 62293
Tssr62294 6 99300299 to 99300313 14 - TSS region transcription start site region 62294
Tssr57973 6 99305986 to 99305994 8 + TSS region transcription start site region 57973
Gm32882 6 99318493 to 99323409 4916 + lncRNA gene predicted gene, 32882
Tssr62295 6 99334332 to 99334357 25 - TSS region transcription start site region 62295
Tssr57974 6 99334472 to 99334482 10 + TSS region transcription start site region 57974
Tssr62296 6 99338279 to 99338290 11 - TSS region transcription start site region 62296
Tssr62297 6 99338329 to 99338350 21 - TSS region transcription start site region 62297
Tssr62298 6 99339100 to 99339102 2 - TSS region transcription start site region 62298
Tssr62299 6 99339375 to 99339386 11 - TSS region transcription start site region 62299
Tssr62300 6 99339398 to 99339417 19 - TSS region transcription start site region 62300
Tssr62301 6 99339420 to 99339455 35 - TSS region transcription start site region 62301
Tssr62302 6 99339463 to 99339484 21 - TSS region transcription start site region 62302
Tssr57975 6 99340546 to 99340557 11 + TSS region transcription start site region 57975
Tssr62303 6 99364282 to 99364286 4 - TSS region transcription start site region 62303
Tssr62304 6 99376021 to 99376036 15 - TSS region transcription start site region 62304
Tssr62305 6 99376044 to 99376065 21 - TSS region transcription start site region 62305
Gm20705 6 99384607 to 99388499 3892 - sense intronic lncRNA gene predicted gene 20705
Tssr62306 6 99402047 to 99402050 3 - TSS region transcription start site region 62306
Tssr62307 6 99404055 to 99404060 5 - TSS region transcription start site region 62307
Tssr62308 6 99429015 to 99429043 28 - TSS region transcription start site region 62308
Tssr57976 6 99433479 to 99433491 12 + TSS region transcription start site region 57976
Tssr62309 6 99435346 to 99435368 22 - TSS region transcription start site region 62309
Tssr62310 6 99435371 to 99435382 11 - TSS region transcription start site region 62310
Tssr62311 6 99484187 to 99484197 10 - TSS region transcription start site region 62311
Gm22328 6 99484591 to 99484702 111 - miRNA gene predicted gene, 22328
Tssr62312 6 99500204 to 99500207 3 - TSS region transcription start site region 62312
Tssr62313 6 99504790 to 99504798 8 - TSS region transcription start site region 62313
Tssr62314 6 99516866 to 99516870 4 - TSS region transcription start site region 62314
Tssr62315 6 99518637 to 99518640 3 - TSS region transcription start site region 62315
Cpgi17781 6 99520215 to 99523601 3386 CpG island CpG island 17781
Tssr62316 6 99520949 to 99521030 81 - TSS region transcription start site region 62316
Tssr62317 6 99521050 to 99521072 22 - TSS region transcription start site region 62317
Tssr62318 6 99521153 to 99521167 14 - TSS region transcription start site region 62318
Tssr62319 6 99521212 to 99521225 13 - TSS region transcription start site region 62319
Tssr62320 6 99521229 to 99521260 31 - TSS region transcription start site region 62320
Tssr57977 6 99521348 to 99521363 15 + TSS region transcription start site region 57977
Tssr57978 6 99521371 to 99521399 28 + TSS region transcription start site region 57978
Tssr57979 6 99521406 to 99521419 13 + TSS region transcription start site region 57979
Tssr62321 6 99521728 to 99521744 16 - TSS region transcription start site region 62321
Tssr57980 6 99522449 to 99522454 5 + TSS region transcription start site region 57980
Tssr62322 6 99522570 to 99522592 22 - TSS region transcription start site region 62322
Tssr62323 6 99522655 to 99522736 81 - TSS region transcription start site region 62323
Tssr62324 6 99523323 to 99523338 15 - TSS region transcription start site region 62324
Tssr62325 6 99523373 to 99523405 32 - TSS region transcription start site region 62325
Gm46991 6 99527748 to 99533668 5920 - lncRNA gene predicted gene, 46991
Tssr62326 6 99545813 to 99545814 1 - TSS region transcription start site region 62326
Gm24936 6 99575891 to 99576137 246 + unclassified non-coding RNA gene predicted gene, 24936