Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:98472749-99043028

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr62254 6 98504852 to 98504858 6 - TSS region transcription start site region 62254
D6Mit230 6 98506837 to 98506960 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 230
Gm32705 6 98507719 to 98510391 2672 + lncRNA gene predicted gene, 32705
Gm44196 6 98507726 to 98697674 189948 - lincRNA gene predicted gene, 44196
Gm32783 6 98517640 to 98521954 4314 + lncRNA gene predicted gene, 32783
4930595L18Rik 6 98535246 to 98552107 16861 - lincRNA gene RIKEN cDNA 4930595L18 gene
Tssr62255 6 98697667 to 98697680 13 - TSS region transcription start site region 62255
Tssr1948 6 98697693 to 98697698 5 - TSS region transcription start site region 1948
Gm32308 6 98757749 to 98758028 279 + pseudogene predicted gene, 32308
Tssr1949 6 98785912 to 98785916 4 + TSS region transcription start site region 1949
Gm32381 6 98860340 to 98860815 475 - pseudogene predicted gene, 32381
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Tssr62256 6 98928026 to 98928043 17 - TSS region transcription start site region 62256
Tssr62257 6 98928923 to 98928925 2 - TSS region transcription start site region 62257
Tssr62258 6 98929393 to 98929398 5 - TSS region transcription start site region 62258
Tssr62259 6 98930069 to 98930084 15 - TSS region transcription start site region 62259
Tssr62260 6 98941742 to 98941743 1 - TSS region transcription start site region 62260
Tssr62261 6 98945576 to 98945591 15 - TSS region transcription start site region 62261
9130401L11Rik 6 98967701 to 98971926 4225 unclassified gene RIKEN cDNA 9130401L11 gene
Tssr62262 6 98978159 to 98978169 10 - TSS region transcription start site region 62262
D6Mit103 6 98993988 to 98994106 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 103
6030492E11Rik 6 98997642 to 98998605 963 unclassified gene RIKEN cDNA 6030492E11 gene
Tssr57961 6 99003216 to 99003229 13 + TSS region transcription start site region 57961
Tssr62263 6 99025212 to 99025215 3 - TSS region transcription start site region 62263
Cpgi17779 6 99027665 to 99028981 1316 CpG island CpG island 17779
Tssr62264 6 99028195 to 99028204 9 - TSS region transcription start site region 62264
Tssr62265 6 99028251 to 99028295 44 - TSS region transcription start site region 62265
Tssr62266 6 99028434 to 99028456 22 - TSS region transcription start site region 62266
Tssr62267 6 99028874 to 99028924 50 - TSS region transcription start site region 62267
Bbaa5 6 145935444 to 98506837 -47428607 QTL B.burgdorferi-associated arthritis 5