Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:98325912-99245916

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm765 6 98238014 to 98342754 104740 - protein coding gene predicted gene 765
Tssr62251 6 98342643 to 98342656 13 - TSS region transcription start site region 62251
Tssr62252 6 98342661 to 98342691 30 - TSS region transcription start site region 62252
Tssr62253 6 98342728 to 98342734 6 - TSS region transcription start site region 62253
Tssr1947 6 98382935 to 98382942 7 + TSS region transcription start site region 1947
Gm32646 6 98402742 to 98423101 20359 + lncRNA gene predicted gene, 32646
Tssr62254 6 98504852 to 98504858 6 - TSS region transcription start site region 62254
D6Mit230 6 98506837 to 98506960 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 230
Gm32705 6 98507719 to 98510391 2672 + lncRNA gene predicted gene, 32705
Gm44196 6 98507726 to 98697674 189948 - lincRNA gene predicted gene, 44196
Gm32783 6 98517640 to 98521954 4314 + lncRNA gene predicted gene, 32783
4930595L18Rik 6 98535246 to 98552107 16861 - lincRNA gene RIKEN cDNA 4930595L18 gene
Tssr62255 6 98697667 to 98697680 13 - TSS region transcription start site region 62255
Tssr1948 6 98697693 to 98697698 5 - TSS region transcription start site region 1948
Gm32308 6 98757749 to 98758028 279 + pseudogene predicted gene, 32308
Tssr1949 6 98785912 to 98785916 4 + TSS region transcription start site region 1949
Gm32381 6 98860340 to 98860815 475 - pseudogene predicted gene, 32381
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Tssr62256 6 98928026 to 98928043 17 - TSS region transcription start site region 62256
Tssr62257 6 98928923 to 98928925 2 - TSS region transcription start site region 62257
Tssr62258 6 98929393 to 98929398 5 - TSS region transcription start site region 62258
Tssr62259 6 98930069 to 98930084 15 - TSS region transcription start site region 62259
Tssr62260 6 98941742 to 98941743 1 - TSS region transcription start site region 62260
Tssr62261 6 98945576 to 98945591 15 - TSS region transcription start site region 62261
9130401L11Rik 6 98967701 to 98971926 4225 unclassified gene RIKEN cDNA 9130401L11 gene
Tssr62262 6 98978159 to 98978169 10 - TSS region transcription start site region 62262
D6Mit103 6 98993988 to 98994106 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 103
6030492E11Rik 6 98997642 to 98998605 963 unclassified gene RIKEN cDNA 6030492E11 gene
Tssr57961 6 99003216 to 99003229 13 + TSS region transcription start site region 57961
Tssr62263 6 99025212 to 99025215 3 - TSS region transcription start site region 62263
Cpgi17779 6 99027665 to 99028981 1316 CpG island CpG island 17779
Tssr62264 6 99028195 to 99028204 9 - TSS region transcription start site region 62264
Tssr62265 6 99028251 to 99028295 44 - TSS region transcription start site region 62265
Tssr62266 6 99028434 to 99028456 22 - TSS region transcription start site region 62266
Tssr62267 6 99028874 to 99028924 50 - TSS region transcription start site region 62267
Tssr62268 6 99044414 to 99044426 12 - TSS region transcription start site region 62268
Tssr62269 6 99052849 to 99052872 23 - TSS region transcription start site region 62269
Tssr57962 6 99053469 to 99053475 6 + TSS region transcription start site region 57962
Tssr62270 6 99057295 to 99057331 36 - TSS region transcription start site region 62270
Cpgi17780 6 99062721 to 99063039 318 CpG island CpG island 17780
Gm49348 6 99075911 to 99076057 146 - miRNA gene predicted gene, 49348
Tssr62271 6 99087497 to 99087544 47 - TSS region transcription start site region 62271
Tssr57963 6 99094731 to 99094737 6 + TSS region transcription start site region 57963
Tssr62272 6 99095581 to 99095593 12 - TSS region transcription start site region 62272
Tssr62273 6 99095603 to 99095613 10 - TSS region transcription start site region 62273
Tssr57964 6 99095720 to 99095731 11 + TSS region transcription start site region 57964
Tssr57965 6 99095773 to 99095782 9 + TSS region transcription start site region 57965
Tssr62274 6 99096181 to 99096186 5 - TSS region transcription start site region 62274
Tssr62275 6 99096196 to 99096240 44 - TSS region transcription start site region 62275
Tssr62276 6 99096245 to 99096259 14 - TSS region transcription start site region 62276
Tssr62277 6 99096261 to 99096272 11 - TSS region transcription start site region 62277
Tssr62278 6 99096955 to 99096961 6 - TSS region transcription start site region 62278
Gm19665 6 99097669 to 99108316 10647 - unclassified gene predicted gene, 19665
Gm38865 6 99118335 to 99127527 9192 - lncRNA gene predicted gene, 38865
Tssr62279 6 99167759 to 99167763 4 - TSS region transcription start site region 62279
Tssr57966 6 99172390 to 99172422 32 + TSS region transcription start site region 57966
Tssr62280 6 99173307 to 99173318 11 - TSS region transcription start site region 62280
Tssr62281 6 99173327 to 99173365 38 - TSS region transcription start site region 62281
Tssr1950 6 99173377 to 99173388 11 - TSS region transcription start site region 1950
Tssr62282 6 99173592 to 99173597 5 - TSS region transcription start site region 62282
Tssr62283 6 99176359 to 99176367 8 - TSS region transcription start site region 62283
Tssr57967 6 99189082 to 99189106 24 + TSS region transcription start site region 57967
Tssr62284 6 99193038 to 99193041 3 - TSS region transcription start site region 62284
Tssr62285 6 99194509 to 99194513 4 - TSS region transcription start site region 62285
Tssr62286 6 99203127 to 99203131 4 - TSS region transcription start site region 62286
Tssr57968 6 99204438 to 99204459 21 + TSS region transcription start site region 57968
Tssr62287 6 99204462 to 99204470 8 - TSS region transcription start site region 62287
Tssr62288 6 99204488 to 99204497 9 - TSS region transcription start site region 62288
Tssr62289 6 99204955 to 99204974 19 - TSS region transcription start site region 62289
Tssr62290 6 99234306 to 99234310 4 - TSS region transcription start site region 62290
Bbaa5 6 145935444 to 98506837 -47428607 QTL B.burgdorferi-associated arthritis 5