Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:97957719-99060391

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc45 6 92607306 to 98258933 5651627 QTL susceptibility to lung cancer 45
Mitf 6 97807052 to 98021349 214297 + protein coding gene melanogenesis associated transcription factor
Tssr57934 6 97971220 to 97971266 46 + TSS region transcription start site region 57934
Tssr57935 6 97972598 to 97972607 9 + TSS region transcription start site region 57935
Tssr57936 6 97977728 to 97977739 11 + TSS region transcription start site region 57936
Tssr57937 6 97977862 to 97977878 16 + TSS region transcription start site region 57937
Tssr57938 6 97977955 to 97977969 14 + TSS region transcription start site region 57938
Tssr57939 6 97978633 to 97978655 22 + TSS region transcription start site region 57939
Tssr57940 6 97978752 to 97978763 11 + TSS region transcription start site region 57940
Tssr57941 6 97978802 to 97978815 13 + TSS region transcription start site region 57941
Tssr57942 6 97980126 to 97980156 30 + TSS region transcription start site region 57942
Tssr57943 6 97991776 to 97991790 14 + TSS region transcription start site region 57943
Tssr62250 6 97993158 to 97993203 45 - TSS region transcription start site region 62250
Tssr57944 6 97993289 to 97993302 13 + TSS region transcription start site region 57944
Tssr57945 6 97994376 to 97994402 26 + TSS region transcription start site region 57945
Tssr57946 6 98000996 to 98001015 19 + TSS region transcription start site region 57946
Tssr57947 6 98004756 to 98004781 25 + TSS region transcription start site region 57947
Tssr57948 6 98005075 to 98005089 14 + TSS region transcription start site region 57948
Cpgi17778 6 98017982 to 98018207 225 CpG island CpG island 17778
Tssr57949 6 98018440 to 98018461 21 + TSS region transcription start site region 57949
Tssr57950 6 98018487 to 98018500 13 + TSS region transcription start site region 57950
Tssr57951 6 98018665 to 98018678 13 + TSS region transcription start site region 57951
Tssr57952 6 98018702 to 98018730 28 + TSS region transcription start site region 57952
Tssr57953 6 98019012 to 98019029 17 + TSS region transcription start site region 57953
Tssr57954 6 98019067 to 98019077 10 + TSS region transcription start site region 57954
Tssr57955 6 98020043 to 98020047 4 + TSS region transcription start site region 57955
Tssr57956 6 98020400 to 98020431 31 + TSS region transcription start site region 57956
D6Mit388 6 98048208 to 98048332 124 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 388
D6Mit214 6 98064336 to 98064638 302 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 214
Gm32592 6 98224517 to 98251307 26790 + antisense lncRNA gene predicted gene, 32592
Gm765 6 98238014 to 98342754 104740 - protein coding gene predicted gene 765
Gm32535 6 98258289 to 98266369 8080 + lncRNA gene predicted gene, 32535
D6Mit165 6 98258792 to 98258933 141 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 165
D6Mit66 6 98270318 to 98270528 210 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 66
Tssr57957 6 98275462 to 98275473 11 + TSS region transcription start site region 57957
Tssr57958 6 98275486 to 98275505 19 + TSS region transcription start site region 57958
Gm7892 6 98275536 to 98276113 577 + pseudogene predicted gene 7892
Tssr57959 6 98275915 to 98275923 8 + TSS region transcription start site region 57959
Tssr57960 6 98276504 to 98276525 21 + TSS region transcription start site region 57960
Tssr62251 6 98342643 to 98342656 13 - TSS region transcription start site region 62251
Tssr62252 6 98342661 to 98342691 30 - TSS region transcription start site region 62252
Tssr62253 6 98342728 to 98342734 6 - TSS region transcription start site region 62253
Tssr1947 6 98382935 to 98382942 7 + TSS region transcription start site region 1947
Gm32646 6 98402742 to 98423101 20359 + lncRNA gene predicted gene, 32646
Tssr62254 6 98504852 to 98504858 6 - TSS region transcription start site region 62254
D6Mit230 6 98506837 to 98506960 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 230
Gm32705 6 98507719 to 98510391 2672 + lncRNA gene predicted gene, 32705
Gm44196 6 98507726 to 98697674 189948 - lincRNA gene predicted gene, 44196
Gm32783 6 98517640 to 98521954 4314 + lncRNA gene predicted gene, 32783
4930595L18Rik 6 98535246 to 98552107 16861 - lincRNA gene RIKEN cDNA 4930595L18 gene
Tssr62255 6 98697667 to 98697680 13 - TSS region transcription start site region 62255
Tssr1948 6 98697693 to 98697698 5 - TSS region transcription start site region 1948
Gm32308 6 98757749 to 98758028 279 + pseudogene predicted gene, 32308
Tssr1949 6 98785912 to 98785916 4 + TSS region transcription start site region 1949
Gm32381 6 98860340 to 98860815 475 - pseudogene predicted gene, 32381
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Tssr62256 6 98928026 to 98928043 17 - TSS region transcription start site region 62256
Tssr62257 6 98928923 to 98928925 2 - TSS region transcription start site region 62257
Tssr62258 6 98929393 to 98929398 5 - TSS region transcription start site region 62258
Tssr62259 6 98930069 to 98930084 15 - TSS region transcription start site region 62259
Tssr62260 6 98941742 to 98941743 1 - TSS region transcription start site region 62260
Tssr62261 6 98945576 to 98945591 15 - TSS region transcription start site region 62261
9130401L11Rik 6 98967701 to 98971926 4225 unclassified gene RIKEN cDNA 9130401L11 gene
Tssr62262 6 98978159 to 98978169 10 - TSS region transcription start site region 62262
D6Mit103 6 98993988 to 98994106 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 103
6030492E11Rik 6 98997642 to 98998605 963 unclassified gene RIKEN cDNA 6030492E11 gene
Tssr57961 6 99003216 to 99003229 13 + TSS region transcription start site region 57961
Tssr62263 6 99025212 to 99025215 3 - TSS region transcription start site region 62263
Cpgi17779 6 99027665 to 99028981 1316 CpG island CpG island 17779
Tssr62264 6 99028195 to 99028204 9 - TSS region transcription start site region 62264
Tssr62265 6 99028251 to 99028295 44 - TSS region transcription start site region 62265
Tssr62266 6 99028434 to 99028456 22 - TSS region transcription start site region 62266
Tssr62267 6 99028874 to 99028924 50 - TSS region transcription start site region 62267
Tssr62268 6 99044414 to 99044426 12 - TSS region transcription start site region 62268
Tssr62269 6 99052849 to 99052872 23 - TSS region transcription start site region 62269
Tssr57962 6 99053469 to 99053475 6 + TSS region transcription start site region 57962
Tssr62270 6 99057295 to 99057331 36 - TSS region transcription start site region 62270
Bbaa5 6 145935444 to 98506837 -47428607 QTL B.burgdorferi-associated arthritis 5