Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:97850069-100010084

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258 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc45 6 92607306 to 98258933 5651627 QTL susceptibility to lung cancer 45
Mitf 6 97807052 to 98021349 214297 + protein coding gene melanogenesis associated transcription factor
Tssr57888 6 97850132 to 97850144 12 + TSS region transcription start site region 57888
Tssr57889 6 97850672 to 97850700 28 + TSS region transcription start site region 57889
Tssr57890 6 97850917 to 97850943 26 + TSS region transcription start site region 57890
Tssr57891 6 97850977 to 97850986 9 + TSS region transcription start site region 57891
Tssr57892 6 97853502 to 97853518 16 + TSS region transcription start site region 57892
Tssr1946 6 97854735 to 97854753 18 + TSS region transcription start site region 1946
Tssr57893 6 97862889 to 97862934 45 + TSS region transcription start site region 57893
Tssr62248 6 97863398 to 97863402 4 - TSS region transcription start site region 62248
Tssr57894 6 97868791 to 97868806 15 + TSS region transcription start site region 57894
Tssr57895 6 97869376 to 97869387 11 + TSS region transcription start site region 57895
Tssr57896 6 97874174 to 97874182 8 + TSS region transcription start site region 57896
Tssr57897 6 97875948 to 97875959 11 + TSS region transcription start site region 57897
Tssr57898 6 97876151 to 97876170 19 + TSS region transcription start site region 57898
Tssr57899 6 97876540 to 97876569 29 + TSS region transcription start site region 57899
Tssr57900 6 97880515 to 97880519 4 + TSS region transcription start site region 57900
Tssr57901 6 97884046 to 97884050 4 + TSS region transcription start site region 57901
Tssr57902 6 97888258 to 97888269 11 + TSS region transcription start site region 57902
Gm15531 6 97890288 to 97890539 251 - pseudogene predicted gene 15531
Tssr62249 6 97890570 to 97890575 5 - TSS region transcription start site region 62249
Tssr57903 6 97892355 to 97892371 16 + TSS region transcription start site region 57903
Tssr57904 6 97893936 to 97893952 16 + TSS region transcription start site region 57904
Tssr57905 6 97894036 to 97894064 28 + TSS region transcription start site region 57905
Tssr57906 6 97904652 to 97904668 16 + TSS region transcription start site region 57906
Tssr57907 6 97904703 to 97904715 12 + TSS region transcription start site region 57907
Tssr57908 6 97915186 to 97915201 15 + TSS region transcription start site region 57908
Tssr57909 6 97915235 to 97915244 9 + TSS region transcription start site region 57909
Tssr57910 6 97915418 to 97915429 11 + TSS region transcription start site region 57910
Tssr57911 6 97922751 to 97922757 6 + TSS region transcription start site region 57911
Tssr57912 6 97925662 to 97925666 4 + TSS region transcription start site region 57912
Tssr57913 6 97929808 to 97929822 14 + TSS region transcription start site region 57913
Tssr57914 6 97929823 to 97929863 40 + TSS region transcription start site region 57914
Tssr57915 6 97941141 to 97941153 12 + TSS region transcription start site region 57915
Tssr57916 6 97941172 to 97941192 20 + TSS region transcription start site region 57916
Tssr57917 6 97941195 to 97941209 14 + TSS region transcription start site region 57917
Tssr57918 6 97941227 to 97941229 2 + TSS region transcription start site region 57918
Tssr57919 6 97941971 to 97941979 8 + TSS region transcription start site region 57919
Tssr57920 6 97943270 to 97943297 27 + TSS region transcription start site region 57920
Tssr57921 6 97943299 to 97943311 12 + TSS region transcription start site region 57921
Tssr57922 6 97943325 to 97943337 12 + TSS region transcription start site region 57922
Tssr57923 6 97944245 to 97944294 49 + TSS region transcription start site region 57923
Tssr57924 6 97944342 to 97944353 11 + TSS region transcription start site region 57924
Tssr57925 6 97944544 to 97944555 11 + TSS region transcription start site region 57925
Tssr57926 6 97944564 to 97944580 16 + TSS region transcription start site region 57926
Tssr57927 6 97945175 to 97945190 15 + TSS region transcription start site region 57927
Tssr57928 6 97946833 to 97946855 22 + TSS region transcription start site region 57928
Tssr57929 6 97951013 to 97951024 11 + TSS region transcription start site region 57929
Tssr57930 6 97957011 to 97957017 6 + TSS region transcription start site region 57930
Tssr57931 6 97957033 to 97957038 5 + TSS region transcription start site region 57931
Tssr57932 6 97957039 to 97957049 10 + TSS region transcription start site region 57932
Tssr57933 6 97957079 to 97957086 7 + TSS region transcription start site region 57933
Tssr57934 6 97971220 to 97971266 46 + TSS region transcription start site region 57934
Tssr57935 6 97972598 to 97972607 9 + TSS region transcription start site region 57935
Tssr57936 6 97977728 to 97977739 11 + TSS region transcription start site region 57936
Tssr57937 6 97977862 to 97977878 16 + TSS region transcription start site region 57937
Tssr57938 6 97977955 to 97977969 14 + TSS region transcription start site region 57938
Tssr57939 6 97978633 to 97978655 22 + TSS region transcription start site region 57939
Tssr57940 6 97978752 to 97978763 11 + TSS region transcription start site region 57940
Tssr57941 6 97978802 to 97978815 13 + TSS region transcription start site region 57941
Tssr57942 6 97980126 to 97980156 30 + TSS region transcription start site region 57942
Tssr57943 6 97991776 to 97991790 14 + TSS region transcription start site region 57943
Tssr62250 6 97993158 to 97993203 45 - TSS region transcription start site region 62250
Tssr57944 6 97993289 to 97993302 13 + TSS region transcription start site region 57944
Tssr57945 6 97994376 to 97994402 26 + TSS region transcription start site region 57945
Tssr57946 6 98000996 to 98001015 19 + TSS region transcription start site region 57946
Tssr57947 6 98004756 to 98004781 25 + TSS region transcription start site region 57947
Tssr57948 6 98005075 to 98005089 14 + TSS region transcription start site region 57948
Cpgi17778 6 98017982 to 98018207 225 CpG island CpG island 17778
Tssr57949 6 98018440 to 98018461 21 + TSS region transcription start site region 57949
Tssr57950 6 98018487 to 98018500 13 + TSS region transcription start site region 57950
Tssr57951 6 98018665 to 98018678 13 + TSS region transcription start site region 57951
Tssr57952 6 98018702 to 98018730 28 + TSS region transcription start site region 57952
Tssr57953 6 98019012 to 98019029 17 + TSS region transcription start site region 57953
Tssr57954 6 98019067 to 98019077 10 + TSS region transcription start site region 57954
Tssr57955 6 98020043 to 98020047 4 + TSS region transcription start site region 57955
Tssr57956 6 98020400 to 98020431 31 + TSS region transcription start site region 57956
D6Mit388 6 98048208 to 98048332 124 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 388
D6Mit214 6 98064336 to 98064638 302 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 214
Gm32592 6 98224517 to 98251307 26790 + antisense lncRNA gene predicted gene, 32592
Gm765 6 98238014 to 98342754 104740 - protein coding gene predicted gene 765
Gm32535 6 98258289 to 98266369 8080 + lncRNA gene predicted gene, 32535
D6Mit165 6 98258792 to 98258933 141 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 165
D6Mit66 6 98270318 to 98270528 210 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 66
Tssr57957 6 98275462 to 98275473 11 + TSS region transcription start site region 57957
Tssr57958 6 98275486 to 98275505 19 + TSS region transcription start site region 57958
Gm7892 6 98275536 to 98276113 577 + pseudogene predicted gene 7892
Tssr57959 6 98275915 to 98275923 8 + TSS region transcription start site region 57959
Tssr57960 6 98276504 to 98276525 21 + TSS region transcription start site region 57960
Tssr62251 6 98342643 to 98342656 13 - TSS region transcription start site region 62251
Tssr62252 6 98342661 to 98342691 30 - TSS region transcription start site region 62252
Tssr62253 6 98342728 to 98342734 6 - TSS region transcription start site region 62253
Tssr1947 6 98382935 to 98382942 7 + TSS region transcription start site region 1947
Gm32646 6 98402742 to 98423101 20359 + lncRNA gene predicted gene, 32646
Tssr62254 6 98504852 to 98504858 6 - TSS region transcription start site region 62254
D6Mit230 6 98506837 to 98506960 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 230
Gm32705 6 98507719 to 98510391 2672 + lncRNA gene predicted gene, 32705
Gm44196 6 98507726 to 98697674 189948 - lincRNA gene predicted gene, 44196
Gm32783 6 98517640 to 98521954 4314 + lncRNA gene predicted gene, 32783
4930595L18Rik 6 98535246 to 98552107 16861 - lincRNA gene RIKEN cDNA 4930595L18 gene
Tssr62255 6 98697667 to 98697680 13 - TSS region transcription start site region 62255
Tssr1948 6 98697693 to 98697698 5 - TSS region transcription start site region 1948
Gm32308 6 98757749 to 98758028 279 + pseudogene predicted gene, 32308
Tssr1949 6 98785912 to 98785916 4 + TSS region transcription start site region 1949
Gm32381 6 98860340 to 98860815 475 - pseudogene predicted gene, 32381
Foxp1 6 98925338 to 99522721 597383 - protein coding gene forkhead box P1
Tssr62256 6 98928026 to 98928043 17 - TSS region transcription start site region 62256
Tssr62257 6 98928923 to 98928925 2 - TSS region transcription start site region 62257
Tssr62258 6 98929393 to 98929398 5 - TSS region transcription start site region 62258
Tssr62259 6 98930069 to 98930084 15 - TSS region transcription start site region 62259
Tssr62260 6 98941742 to 98941743 1 - TSS region transcription start site region 62260
Tssr62261 6 98945576 to 98945591 15 - TSS region transcription start site region 62261
9130401L11Rik 6 98967701 to 98971926 4225 unclassified gene RIKEN cDNA 9130401L11 gene
Tssr62262 6 98978159 to 98978169 10 - TSS region transcription start site region 62262
D6Mit103 6 98993988 to 98994106 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 103
6030492E11Rik 6 98997642 to 98998605 963 unclassified gene RIKEN cDNA 6030492E11 gene
Tssr57961 6 99003216 to 99003229 13 + TSS region transcription start site region 57961
Tssr62263 6 99025212 to 99025215 3 - TSS region transcription start site region 62263
Cpgi17779 6 99027665 to 99028981 1316 CpG island CpG island 17779
Tssr62264 6 99028195 to 99028204 9 - TSS region transcription start site region 62264
Tssr62265 6 99028251 to 99028295 44 - TSS region transcription start site region 62265
Tssr62266 6 99028434 to 99028456 22 - TSS region transcription start site region 62266
Tssr62267 6 99028874 to 99028924 50 - TSS region transcription start site region 62267
Tssr62268 6 99044414 to 99044426 12 - TSS region transcription start site region 62268
Tssr62269 6 99052849 to 99052872 23 - TSS region transcription start site region 62269
Tssr57962 6 99053469 to 99053475 6 + TSS region transcription start site region 57962
Tssr62270 6 99057295 to 99057331 36 - TSS region transcription start site region 62270
Cpgi17780 6 99062721 to 99063039 318 CpG island CpG island 17780
Gm49348 6 99075911 to 99076057 146 - miRNA gene predicted gene, 49348
Tssr62271 6 99087497 to 99087544 47 - TSS region transcription start site region 62271
Tssr57963 6 99094731 to 99094737 6 + TSS region transcription start site region 57963
Tssr62272 6 99095581 to 99095593 12 - TSS region transcription start site region 62272
Tssr62273 6 99095603 to 99095613 10 - TSS region transcription start site region 62273
Tssr57964 6 99095720 to 99095731 11 + TSS region transcription start site region 57964
Tssr57965 6 99095773 to 99095782 9 + TSS region transcription start site region 57965
Tssr62274 6 99096181 to 99096186 5 - TSS region transcription start site region 62274
Tssr62275 6 99096196 to 99096240 44 - TSS region transcription start site region 62275
Tssr62276 6 99096245 to 99096259 14 - TSS region transcription start site region 62276
Tssr62277 6 99096261 to 99096272 11 - TSS region transcription start site region 62277
Tssr62278 6 99096955 to 99096961 6 - TSS region transcription start site region 62278
Gm19665 6 99097669 to 99108316 10647 - unclassified gene predicted gene, 19665
Gm38865 6 99118335 to 99127527 9192 - lncRNA gene predicted gene, 38865
Tssr62279 6 99167759 to 99167763 4 - TSS region transcription start site region 62279
Tssr57966 6 99172390 to 99172422 32 + TSS region transcription start site region 57966
Tssr62280 6 99173307 to 99173318 11 - TSS region transcription start site region 62280
Tssr62281 6 99173327 to 99173365 38 - TSS region transcription start site region 62281
Tssr1950 6 99173377 to 99173388 11 - TSS region transcription start site region 1950
Tssr62282 6 99173592 to 99173597 5 - TSS region transcription start site region 62282
Tssr62283 6 99176359 to 99176367 8 - TSS region transcription start site region 62283
Tssr57967 6 99189082 to 99189106 24 + TSS region transcription start site region 57967
Tssr62284 6 99193038 to 99193041 3 - TSS region transcription start site region 62284
Tssr62285 6 99194509 to 99194513 4 - TSS region transcription start site region 62285
Tssr62286 6 99203127 to 99203131 4 - TSS region transcription start site region 62286
Tssr57968 6 99204438 to 99204459 21 + TSS region transcription start site region 57968
Tssr62287 6 99204462 to 99204470 8 - TSS region transcription start site region 62287
Tssr62288 6 99204488 to 99204497 9 - TSS region transcription start site region 62288
Tssr62289 6 99204955 to 99204974 19 - TSS region transcription start site region 62289
Tssr62290 6 99234306 to 99234310 4 - TSS region transcription start site region 62290
Gm20696 6 99257484 to 99666797 409313 - protein coding gene predicted gene 20696
Tssr57969 6 99262886 to 99262891 5 + TSS region transcription start site region 57969
Tssr57970 6 99262924 to 99262928 4 + TSS region transcription start site region 57970
Tssr57971 6 99264456 to 99264488 32 + TSS region transcription start site region 57971
Tssr57972 6 99265022 to 99265042 20 + TSS region transcription start site region 57972
Tssr62291 6 99266366 to 99266378 12 - TSS region transcription start site region 62291
Tssr62292 6 99266381 to 99266401 20 - TSS region transcription start site region 62292
Tssr62293 6 99266494 to 99266540 46 - TSS region transcription start site region 62293
Tssr62294 6 99300299 to 99300313 14 - TSS region transcription start site region 62294
Tssr57973 6 99305986 to 99305994 8 + TSS region transcription start site region 57973
Gm32882 6 99318493 to 99323409 4916 + lncRNA gene predicted gene, 32882
Tssr62295 6 99334332 to 99334357 25 - TSS region transcription start site region 62295
Tssr57974 6 99334472 to 99334482 10 + TSS region transcription start site region 57974
Tssr62296 6 99338279 to 99338290 11 - TSS region transcription start site region 62296
Tssr62297 6 99338329 to 99338350 21 - TSS region transcription start site region 62297
Tssr62298 6 99339100 to 99339102 2 - TSS region transcription start site region 62298
Tssr62299 6 99339375 to 99339386 11 - TSS region transcription start site region 62299
Tssr62300 6 99339398 to 99339417 19 - TSS region transcription start site region 62300
Tssr62301 6 99339420 to 99339455 35 - TSS region transcription start site region 62301
Tssr62302 6 99339463 to 99339484 21 - TSS region transcription start site region 62302
Tssr57975 6 99340546 to 99340557 11 + TSS region transcription start site region 57975
Tssr62303 6 99364282 to 99364286 4 - TSS region transcription start site region 62303
Tssr62304 6 99376021 to 99376036 15 - TSS region transcription start site region 62304
Tssr62305 6 99376044 to 99376065 21 - TSS region transcription start site region 62305
Gm20705 6 99384607 to 99388499 3892 - sense intronic lncRNA gene predicted gene 20705
Tssr62306 6 99402047 to 99402050 3 - TSS region transcription start site region 62306
Tssr62307 6 99404055 to 99404060 5 - TSS region transcription start site region 62307
Tssr62308 6 99429015 to 99429043 28 - TSS region transcription start site region 62308
Tssr57976 6 99433479 to 99433491 12 + TSS region transcription start site region 57976
Tssr62309 6 99435346 to 99435368 22 - TSS region transcription start site region 62309
Tssr62310 6 99435371 to 99435382 11 - TSS region transcription start site region 62310
Tssr62311 6 99484187 to 99484197 10 - TSS region transcription start site region 62311
Gm22328 6 99484591 to 99484702 111 - miRNA gene predicted gene, 22328
Tssr62312 6 99500204 to 99500207 3 - TSS region transcription start site region 62312
Tssr62313 6 99504790 to 99504798 8 - TSS region transcription start site region 62313
Tssr62314 6 99516866 to 99516870 4 - TSS region transcription start site region 62314
Tssr62315 6 99518637 to 99518640 3 - TSS region transcription start site region 62315
Cpgi17781 6 99520215 to 99523601 3386 CpG island CpG island 17781
Tssr62316 6 99520949 to 99521030 81 - TSS region transcription start site region 62316
Tssr62317 6 99521050 to 99521072 22 - TSS region transcription start site region 62317
Tssr62318 6 99521153 to 99521167 14 - TSS region transcription start site region 62318
Tssr62319 6 99521212 to 99521225 13 - TSS region transcription start site region 62319