Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:97377959-97856402

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frmd4b 6 97286867 to 97617541 330674 - protein coding gene FERM domain containing 4B
Tssr62229 6 97381106 to 97381117 11 - TSS region transcription start site region 62229
Tssr62230 6 97384504 to 97384510 6 - TSS region transcription start site region 62230
Tssr57856 6 97385198 to 97385203 5 + TSS region transcription start site region 57856
Gm32380 6 97396905 to 97400688 3783 + lncRNA gene predicted gene, 32380
Tssr62231 6 97431402 to 97431453 51 - TSS region transcription start site region 62231
Tssr62232 6 97431459 to 97431466 7 - TSS region transcription start site region 62232
Tssr57857 6 97431494 to 97431512 18 + TSS region transcription start site region 57857
Tssr57858 6 97439542 to 97439557 15 + TSS region transcription start site region 57858
Gm19653 6 97449750 to 97451486 1736 + pseudogene predicted gene, 19653
Tssr62233 6 97457249 to 97457281 32 - TSS region transcription start site region 62233
Tssr62234 6 97459262 to 97459278 16 - TSS region transcription start site region 62234
Tssr62235 6 97459279 to 97459303 24 - TSS region transcription start site region 62235
Tssr62236 6 97459309 to 97459320 11 - TSS region transcription start site region 62236
Tssr62237 6 97459357 to 97459375 18 - TSS region transcription start site region 62237
Cpgi17774 6 97487477 to 97488110 633 CpG island CpG island 17774
Tssr62238 6 97487773 to 97487797 24 - TSS region transcription start site region 62238
Tssr62239 6 97487801 to 97487879 78 - TSS region transcription start site region 62239
Tssr62240 6 97487888 to 97487972 84 - TSS region transcription start site region 62240
Tssr57859 6 97509653 to 97509698 45 + TSS region transcription start site region 57859
Gm46970 6 97514567 to 97538173 23606 + lncRNA gene predicted gene, 46970
Tssr62241 6 97519092 to 97519096 4 - TSS region transcription start site region 62241
Cpgi17775 6 97523130 to 97523422 292 CpG island CpG island 17775
Tssr57860 6 97536591 to 97536593 2 + TSS region transcription start site region 57860
Gm25852 6 97547438 to 97547567 129 - snoRNA gene predicted gene, 25852
Gm46969 6 97566098 to 97577455 11357 + lncRNA gene predicted gene, 46969
Gm23510 6 97572076 to 97572238 162 - snRNA gene predicted gene, 23510
Gm32247 6 97577959 to 97656402 78443 + lncRNA gene predicted gene, 32247
Tssr62242 6 97578093 to 97578125 32 - TSS region transcription start site region 62242
Gm44102 6 97579427 to 97581092 1665 - unclassified gene predicted gene, 44102
Tssr62243 6 97606472 to 97606475 3 - TSS region transcription start site region 62243
Cpgi17776 6 97616719 to 97617849 1130 CpG island CpG island 17776
Tssr62244 6 97617536 to 97617597 61 - TSS region transcription start site region 62244
Tssr62245 6 97617627 to 97617642 15 - TSS region transcription start site region 62245
C030006F08Rik 6 97619678 to 97620415 737 unclassified gene RIKEN cDNA C030006F08 gene
Tssr57861 6 97625002 to 97625007 5 + TSS region transcription start site region 57861
Gm32481 6 97693923 to 97710400 16477 + lncRNA gene predicted gene, 32481
Gm24565 6 97730439 to 97730545 106 + snRNA gene predicted gene, 24565
D6Mit67 6 97751800 to 97751952 152 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 67
Gm23703 6 97790512 to 97790654 142 + snoRNA gene predicted gene, 23703
Cpgi17777 6 97806830 to 97807598 768 CpG island CpG island 17777
Tssr57862 6 97807014 to 97807067 53 + TSS region transcription start site region 57862
Mitf 6 97807052 to 98021349 214297 + protein coding gene melanogenesis associated transcription factor
Tssr57863 6 97807073 to 97807084 11 + TSS region transcription start site region 57863
Tssr57864 6 97807646 to 97807668 22 + TSS region transcription start site region 57864
Tssr57865 6 97807898 to 97807914 16 + TSS region transcription start site region 57865
Tssr62246 6 97818219 to 97818239 20 - TSS region transcription start site region 62246
Tssr62247 6 97821893 to 97821898 5 - TSS region transcription start site region 62247
Tssr57866 6 97826936 to 97826969 33 + TSS region transcription start site region 57866
Tssr57867 6 97827234 to 97827242 8 + TSS region transcription start site region 57867
Tssr57868 6 97827253 to 97827264 11 + TSS region transcription start site region 57868
Tssr57869 6 97827279 to 97827302 23 + TSS region transcription start site region 57869
Tssr1945 6 97827313 to 97827316 3 + TSS region transcription start site region 1945
Tssr57870 6 97827445 to 97827461 16 + TSS region transcription start site region 57870
Tssr57871 6 97827465 to 97827479 14 + TSS region transcription start site region 57871
Tssr57872 6 97828239 to 97828249 10 + TSS region transcription start site region 57872
Tssr57873 6 97828290 to 97828295 5 + TSS region transcription start site region 57873
Tssr57874 6 97828300 to 97828312 12 + TSS region transcription start site region 57874
Tssr57875 6 97828317 to 97828332 15 + TSS region transcription start site region 57875
Tssr57876 6 97828352 to 97828362 10 + TSS region transcription start site region 57876
Tssr57877 6 97829260 to 97829303 43 + TSS region transcription start site region 57877
Tssr57878 6 97829304 to 97829316 12 + TSS region transcription start site region 57878
Tssr57879 6 97829320 to 97829346 26 + TSS region transcription start site region 57879
Tssr57880 6 97829373 to 97829393 20 + TSS region transcription start site region 57880
Tssr57881 6 97829573 to 97829576 3 + TSS region transcription start site region 57881
Tssr57882 6 97829671 to 97829682 11 + TSS region transcription start site region 57882
Tssr57883 6 97830947 to 97830958 11 + TSS region transcription start site region 57883
Tssr57884 6 97831331 to 97831343 12 + TSS region transcription start site region 57884
Tssr57885 6 97833004 to 97833019 15 + TSS region transcription start site region 57885
Tssr57886 6 97835169 to 97835183 14 + TSS region transcription start site region 57886
Tssr57887 6 97836501 to 97836541 40 + TSS region transcription start site region 57887
Tssr57888 6 97850132 to 97850144 12 + TSS region transcription start site region 57888
Tssr57889 6 97850672 to 97850700 28 + TSS region transcription start site region 57889
Tssr57890 6 97850917 to 97850943 26 + TSS region transcription start site region 57890
Tssr57891 6 97850977 to 97850986 9 + TSS region transcription start site region 57891
Tssr57892 6 97853502 to 97853518 16 + TSS region transcription start site region 57892
Tssr1946 6 97854735 to 97854753 18 + TSS region transcription start site region 1946