Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:96117987-97067988

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W3q3 6 4503823 to 96656149 92152326 QTL weight 3 weeks QTL 3
W10q11 6 4503823 to 96656149 92152326 QTL weight 10 weeks QTL 11
Egq8 6 4503823 to 96656149 92152326 QTL early growth QTL 8
W6q4 6 4503823 to 96656149 92152326 QTL weight 6 weeks QTL 4
Alh1 6 78000000 to 97000000 19000000 QTL amplitude of lateral head displacement 1
Tafa1 6 96113154 to 96657198 544044 + protein coding gene TAFA chemokine like family member 1
Tssr57829 6 96126649 to 96126663 14 + TSS region transcription start site region 57829
Tssr57830 6 96140780 to 96140802 22 + TSS region transcription start site region 57830
1700123L14Rik 6 96164503 to 96166205 1702 - protein coding gene RIKEN cDNA 1700123L14 gene
Cpgi17768 6 96165416 to 96165570 154 CpG island CpG island 17768
Tssr62192 6 96166195 to 96166208 13 - TSS region transcription start site region 62192
Tssr62193 6 96166211 to 96166258 47 - TSS region transcription start site region 62193
Tssr57831 6 96253810 to 96253813 3 + TSS region transcription start site region 57831
Tssr57832 6 96258619 to 96258634 15 + TSS region transcription start site region 57832
Tssr57833 6 96282417 to 96282420 3 + TSS region transcription start site region 57833
D6Mit68 6 96330435 to 96330583 148 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 68
Tssr57834 6 96357084 to 96357106 22 + TSS region transcription start site region 57834
Tssr57835 6 96375349 to 96375358 9 + TSS region transcription start site region 57835
Tssr57836 6 96377810 to 96377814 4 + TSS region transcription start site region 57836
Tssr57837 6 96399643 to 96399664 21 + TSS region transcription start site region 57837
D6Mit191 6 96413461 to 96413651 190 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 191
Gm22971 6 96469435 to 96469531 96 - snRNA gene predicted gene, 22971
Gm26011 6 96560761 to 96560864 103 - snRNA gene predicted gene, 26011
Tssr57838 6 96592987 to 96592988 1 + TSS region transcription start site region 57838
D6Mit132 6 96655951 to 96656149 198 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 132
D6Mit379 6 96823096 to 96823191 95 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-379
Tafa4 6 96831206 to 97060411 229205 - protein coding gene TAFA chemokine like family member 4
Tssr1942 6 96978270 to 96978274 4 + TSS region transcription start site region 1942
Cpgi17769 6 97060134 to 97060667 533 CpG island CpG island 17769
Tssr62194 6 97060407 to 97060420 13 - TSS region transcription start site region 62194
W6q5 6 146633626 to 96655951 -49977675 QTL weight 6 weeks QTL 5
Tesq2 6 146633626 to 96655951 -49977675 QTL testis weight QTL 2
Egq11 6 146633626 to 96655951 -49977675 QTL early growth QTL 11