Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:95929435-97009531

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W10q11 6 4503823 to 96656149 92152326 QTL weight 10 weeks QTL 11
W3q3 6 4503823 to 96656149 92152326 QTL weight 3 weeks QTL 3
W6q4 6 4503823 to 96656149 92152326 QTL weight 6 weeks QTL 4
Egq8 6 4503823 to 96656149 92152326 QTL early growth QTL 8
Alh1 6 78000000 to 97000000 19000000 QTL amplitude of lateral head displacement 1
2900060L22Rik 6 96022634 to 96117045 94411 - unclassified non-coding RNA gene RIKEN cDNA 2900060L22 gene
Tssr57823 6 96032995 to 96033022 27 + TSS region transcription start site region 57823
Gm5881 6 96033003 to 96033369 366 - pseudogene predicted gene 5881
Tssr62189 6 96033275 to 96033297 22 - TSS region transcription start site region 62189
A330102K18Rik 6 96035431 to 96036590 1159 unclassified gene RIKEN cDNA A330102K18 gene
Tssr57824 6 96113106 to 96113117 11 + TSS region transcription start site region 57824
Tssr57825 6 96113118 to 96113127 9 + TSS region transcription start site region 57825
Tssr57826 6 96113146 to 96113170 24 + TSS region transcription start site region 57826
Tafa1 6 96113154 to 96657198 544044 + protein coding gene TAFA chemokine like family member 1
Tssr57827 6 96113448 to 96113452 4 + TSS region transcription start site region 57827
Tssr57828 6 96115249 to 96115271 22 + TSS region transcription start site region 57828
Tssr62190 6 96115914 to 96115918 4 - TSS region transcription start site region 62190
Cpgi17767 6 96116637 to 96117227 590 CpG island CpG island 17767
Tssr62191 6 96116971 to 96117004 33 - TSS region transcription start site region 62191
Tssr57829 6 96126649 to 96126663 14 + TSS region transcription start site region 57829
Tssr57830 6 96140780 to 96140802 22 + TSS region transcription start site region 57830
1700123L14Rik 6 96164503 to 96166205 1702 - protein coding gene RIKEN cDNA 1700123L14 gene
Cpgi17768 6 96165416 to 96165570 154 CpG island CpG island 17768
Tssr62192 6 96166195 to 96166208 13 - TSS region transcription start site region 62192
Tssr62193 6 96166211 to 96166258 47 - TSS region transcription start site region 62193
Tssr57831 6 96253810 to 96253813 3 + TSS region transcription start site region 57831
Tssr57832 6 96258619 to 96258634 15 + TSS region transcription start site region 57832
Tssr57833 6 96282417 to 96282420 3 + TSS region transcription start site region 57833
D6Mit68 6 96330435 to 96330583 148 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 68
Tssr57834 6 96357084 to 96357106 22 + TSS region transcription start site region 57834
Tssr57835 6 96375349 to 96375358 9 + TSS region transcription start site region 57835
Tssr57836 6 96377810 to 96377814 4 + TSS region transcription start site region 57836
Tssr57837 6 96399643 to 96399664 21 + TSS region transcription start site region 57837
D6Mit191 6 96413461 to 96413651 190 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 191
Gm22971 6 96469435 to 96469531 96 - snRNA gene predicted gene, 22971
Gm26011 6 96560761 to 96560864 103 - snRNA gene predicted gene, 26011
Tssr57838 6 96592987 to 96592988 1 + TSS region transcription start site region 57838
D6Mit132 6 96655951 to 96656149 198 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 132
D6Mit379 6 96823096 to 96823191 95 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-379
Tafa4 6 96831206 to 97060411 229205 - protein coding gene TAFA chemokine like family member 4
Tssr1942 6 96978270 to 96978274 4 + TSS region transcription start site region 1942
Egq11 6 146633626 to 96655951 -49977675 QTL early growth QTL 11
Tesq2 6 146633626 to 96655951 -49977675 QTL testis weight QTL 2
W6q5 6 146633626 to 96655951 -49977675 QTL weight 6 weeks QTL 5