Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:94653441-95543706

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrig1 6 94604529 to 94700158 95629 - protein coding gene leucine-rich repeats and immunoglobulin-like domains 1
Tssr62178 6 94654617 to 94654622 5 - TSS region transcription start site region 62178
Tssr57812 6 94661669 to 94661706 37 + TSS region transcription start site region 57812
Tssr62179 6 94665193 to 94665220 27 - TSS region transcription start site region 62179
Tssr62180 6 94665325 to 94665347 22 - TSS region transcription start site region 62180
Tssr57813 6 94665536 to 94665551 15 + TSS region transcription start site region 57813
Tssr57814 6 94672712 to 94672725 13 + TSS region transcription start site region 57814
Tssr57815 6 94680942 to 94680952 10 + TSS region transcription start site region 57815
Tssr62181 6 94681684 to 94681694 10 - TSS region transcription start site region 62181
Tssr57816 6 94681755 to 94681791 36 + TSS region transcription start site region 57816
Tssr62182 6 94683876 to 94683880 4 - TSS region transcription start site region 62182
Tssr62183 6 94698856 to 94698859 3 - TSS region transcription start site region 62183
Tssr57817 6 94698909 to 94698915 6 + TSS region transcription start site region 57817
Cpgi17761 6 94699072 to 94700493 1421 CpG island CpG island 17761
Tssr57818 6 94699214 to 94699224 10 + TSS region transcription start site region 57818
Tssr62184 6 94700154 to 94700176 22 - TSS region transcription start site region 62184
Gm6638 6 94722169 to 94722803 634 + pseudogene predicted gene 6638
Tssr57819 6 94722172 to 94722177 5 + TSS region transcription start site region 57819
Cpgi17762 6 94730048 to 94730255 207 CpG island CpG island 17762
D6Nds2 6 94739206 to 94739316 110 DNA segment DNA segment, Chr 6, Nuffield Department of Surgery 2
Tssr57820 6 94745551 to 94745558 7 + TSS region transcription start site region 57820
Cpgi17763 6 94760716 to 94761134 418 CpG island CpG island 17763
Gm43997 6 94799432 to 94800436 1004 + unclassified gene predicted gene, 43997
Gm7833 6 94820530 to 94821519 989 + pseudogene predicted gene 7833
Gm23364 6 94823733 to 94823805 72 + miRNA gene predicted gene, 23364
Gm24601 6 94826781 to 94826923 142 - rRNA gene predicted gene, 24601
Tssr62185 6 94826881 to 94826889 8 - TSS region transcription start site region 62185
Gm44100 6 94848398 to 94848833 435 - pseudogene predicted gene, 44100
D6Mit101 6 94859651 to 94859795 144 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 101
4930511E03Rik 6 94943834 to 94951545 7711 + lincRNA gene RIKEN cDNA 4930511E03 gene
2410024F20Rik 6 95092012 to 95095080 3068 unclassified gene RIKEN cDNA 2410024F20 gene
Cpgi17764 6 95098441 to 95098706 265 CpG island CpG island 17764
Gm26501 6 95100201 to 95100307 106 - snRNA gene predicted gene, 26501
Kbtbd8os 6 95114017 to 95117631 3614 - antisense lncRNA gene kelch repeat and BTB (POZ) domain containing 8, opposite strand
Cpgi17765 6 95117589 to 95118586 997 CpG island CpG island 17765
Kbtbd8 6 95117880 to 95129793 11913 + protein coding gene kelch repeat and BTB (POZ) domain containing 8
Tssr57821 6 95117901 to 95117960 59 + TSS region transcription start site region 57821
Tssr1941 6 95149866 to 95149872 6 + TSS region transcription start site region 1941
Gm17822 6 95240228 to 95240578 350 - pseudogene predicted gene, 17822
D6Mit156 6 95245438 to 95245535 97 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 156
Tssr57822 6 95250264 to 95250274 10 + TSS region transcription start site region 57822
Gm5723 6 95250301 to 95254515 4214 + pseudogene predicted gene 5723
AY512915 6 95290574 to 95333993 43419 - lncRNA gene cDNA sequence AY512915
Gm10234 6 95322112 to 95322210 98 + protein coding gene predicted gene 10234
Tssr62186 6 95333992 to 95333994 2 - TSS region transcription start site region 62186
Suclg2 6 95473009 to 95718800 245791 - protein coding gene succinate-Coenzyme A ligase, GDP-forming, beta subunit