Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:92673949-94254097

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107 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa20 6 71322621 to 93464093 22141472 QTL B.burgdorferi-associated arthritis 20
Nidd3n 6 75544356 to 94225955 18681599 QTL non-insulin-dependent diabetes mellitus 3 in NSY
Efw 6 75544356 to 94225955 18681599 QTL epididymal fat weight
Idd20 6 92039950 to 92716697 676747 QTL insulin dependent diabetes susceptibility 20
Prickle2 6 92370908 to 92706155 335247 - protein coding gene prickle planar cell polarity protein 2
Tssr62129 6 92677853 to 92677856 3 - TSS region transcription start site region 62129
Cpgi17751 6 92705782 to 92706416 634 CpG island CpG island 17751
Tssr62130 6 92706173 to 92706234 61 - TSS region transcription start site region 62130
Tssr62131 6 92706237 to 92706296 59 - TSS region transcription start site region 62131
D6Mit31.2 6 92716403 to 92716531 128 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 31.2
Cypr4 6 92716503 to 92716697 194 QTL cytokine production 4
D6Mit31 6 92716503 to 92716697 194 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 31
Adamts9 6 92772699 to 92943492 170793 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
Tssr62132 6 92773333 to 92773338 5 - TSS region transcription start site region 62132
Tssr57792 6 92816433 to 92816455 22 + TSS region transcription start site region 57792
Tssr57793 6 92816460 to 92816483 23 + TSS region transcription start site region 57793
Tssr57794 6 92816489 to 92816498 9 + TSS region transcription start site region 57794
A730049H05Rik 6 92816578 to 92847176 30598 + protein coding gene RIKEN cDNA A730049H05 gene
Tssr62133 6 92816636 to 92816655 19 - TSS region transcription start site region 62133
Tssr57795 6 92827634 to 92827663 29 + TSS region transcription start site region 57795
Tssr57796 6 92827672 to 92827685 13 + TSS region transcription start site region 57796
Tssr57797 6 92827725 to 92827747 22 + TSS region transcription start site region 57797
Tssr57798 6 92827779 to 92827790 11 + TSS region transcription start site region 57798
Tssr62134 6 92857026 to 92857031 5 - TSS region transcription start site region 62134
Tssr62135 6 92860431 to 92860447 16 - TSS region transcription start site region 62135
Tssr62136 6 92860494 to 92860509 15 - TSS region transcription start site region 62136
Gm15737 6 92869357 to 92884411 15054 + protein coding gene predicted gene 15737
Tssr62137 6 92870105 to 92870107 2 - TSS region transcription start site region 62137
Tssr62138 6 92908343 to 92908347 4 - TSS region transcription start site region 62138
Tssr62139 6 92918067 to 92918085 18 - TSS region transcription start site region 62139
Cpgi17752 6 92940535 to 92941364 829 CpG island CpG island 17752
Tssr57799 6 92940572 to 92940592 20 + TSS region transcription start site region 57799
9530026P05Rik 6 92940582 to 93111749 171167 + antisense lncRNA gene RIKEN cDNA 9530026P05 gene
Tssr57800 6 92940594 to 92940619 25 + TSS region transcription start site region 57800
Cpgi17753 6 92941400 to 92941680 280 CpG island CpG island 17753
Cpgi17754 6 92942020 to 92942417 397 CpG island CpG island 17754
Cpgi17755 6 92942935 to 92943977 1042 CpG island CpG island 17755
Tssr62140 6 92943370 to 92943382 12 - TSS region transcription start site region 62140
Tssr62141 6 92943485 to 92943507 22 - TSS region transcription start site region 62141
Tssr62142 6 92943513 to 92943539 26 - TSS region transcription start site region 62142
D630004L18Rik 6 92963853 to 92964660 807 unclassified gene RIKEN cDNA D630004L18 gene
Tssr62143 6 92988202 to 92988212 10 - TSS region transcription start site region 62143
Tssr62144 6 92988266 to 92988270 4 - TSS region transcription start site region 62144
Tssr57801 6 93018520 to 93018524 4 + TSS region transcription start site region 57801
Tssr57802 6 93034959 to 93034964 5 + TSS region transcription start site region 57802
Gm44224 6 93079108 to 93080570 1462 + unclassified gene predicted gene, 44224
Gm5313 6 93137004 to 93137990 986 - pseudogene predicted gene 5313
Gm38863 6 93194131 to 93238995 44864 + lncRNA gene predicted gene, 38863
Gm43923 6 93194941 to 93197851 2910 + unclassified gene predicted gene, 43923
Tssr57803 6 93234056 to 93234069 13 + TSS region transcription start site region 57803
Gm44220 6 93241720 to 93244206 2486 + unclassified gene predicted gene, 44220
Tssr57804 6 93241982 to 93241987 5 + TSS region transcription start site region 57804
Gm21052 6 93278033 to 93279705 1672 + pseudogene predicted gene, 21052
Gm46968 6 93299147 to 93314734 15587 - lncRNA gene predicted gene, 46968
Gm25094 6 93335458 to 93335588 130 - snoRNA gene predicted gene, 25094
D6Mit285 6 93426700 to 93426834 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 285
Tssr57805 6 93452322 to 93452325 3 + TSS region transcription start site region 57805
Gm44181 6 93455075 to 93455557 482 - unclassified gene predicted gene, 44181
Pfat2 6 93463949 to 93464093 144 QTL predicted fat percentage 2
D6Mit102 6 93463949 to 93464093 144 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 102
D6Dcr22 6 93463949 to 93464097 148 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 22
Gm22312 6 93509573 to 93509702 129 + snoRNA gene predicted gene, 22312
D6Mit177 6 93533087 to 93533275 188 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 177
Gm7812 6 93649352 to 93650225 873 - pseudogene predicted gene 7812
Magi1 6 93675455 to 94283917 608462 - protein coding gene membrane associated guanylate kinase, WW and PDZ domain containing 1
Tssr62145 6 93675915 to 93675919 4 - TSS region transcription start site region 62145
Cpgi17756 6 93678420 to 93679024 604 CpG island CpG island 17756
Tssr62146 6 93678926 to 93678942 16 - TSS region transcription start site region 62146
Cpgi17757 6 93715937 to 93716204 267 CpG island CpG island 17757
Tssr62147 6 93717489 to 93717517 28 - TSS region transcription start site region 62147
Tssr62148 6 93717588 to 93717598 10 - TSS region transcription start site region 62148
Tssr62149 6 93717614 to 93717622 8 - TSS region transcription start site region 62149
Tssr62150 6 93769633 to 93769637 4 - TSS region transcription start site region 62150
Tssr62151 6 93792466 to 93792482 16 - TSS region transcription start site region 62151
Gm23035 6 93793772 to 93793877 105 + snRNA gene predicted gene, 23035
Tssr62152 6 93806405 to 93806409 4 - TSS region transcription start site region 62152
Tssr62153 6 93811090 to 93811093 3 - TSS region transcription start site region 62153
Tssr62154 6 93815804 to 93815812 8 - TSS region transcription start site region 62154
Gm22840 6 93890615 to 93890750 135 + snoRNA gene predicted gene, 22840
Tssr62155 6 93893331 to 93893341 10 - TSS region transcription start site region 62155
Tssr62156 6 93912503 to 93912514 11 - TSS region transcription start site region 62156
Tssr62157 6 93912520 to 93912563 43 - TSS region transcription start site region 62157
Tssr62158 6 93912586 to 93912623 37 - TSS region transcription start site region 62158
Tssr62159 6 93912954 to 93912977 23 - TSS region transcription start site region 62159
Cpgi17758 6 93913083 to 93913355 272 CpG island CpG island 17758
Tssr62160 6 93913270 to 93913281 11 - TSS region transcription start site region 62160
Tssr62161 6 93913407 to 93913425 18 - TSS region transcription start site region 62161
Tssr62162 6 93913538 to 93913562 24 - TSS region transcription start site region 62162
Tssr62163 6 93913595 to 93913610 15 - TSS region transcription start site region 62163
Tssr62164 6 93913647 to 93913658 11 - TSS region transcription start site region 62164
Tssr62165 6 93913678 to 93913719 41 - TSS region transcription start site region 62165
B430316J06Rik 6 93917764 to 93920776 3012 unclassified gene RIKEN cDNA B430316J06 gene
8030459D09Rik 6 93988801 to 93989738 937 unclassified gene RIKEN cDNA 8030459D09 gene
Tssr62166 6 94028836 to 94028839 3 - TSS region transcription start site region 62166
Tssr1940 6 94086589 to 94086591 2 + TSS region transcription start site region 1940
D6Mit365 6 94104439 to 94104563 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 365
Tssr62167 6 94124870 to 94124873 3 - TSS region transcription start site region 62167
Gm31721 6 94129511 to 94132659 3148 + lncRNA gene predicted gene, 31721
Tssr57806 6 94130644 to 94130663 19 + TSS region transcription start site region 57806
4930511A08Rik 6 94132923 to 94237442 104519 - lncRNA gene RIKEN cDNA 4930511A08 gene
Tssr62168 6 94159789 to 94159792 3 - TSS region transcription start site region 62168
Tssr57807 6 94221955 to 94221958 3 + TSS region transcription start site region 57807
D6Mit178 6 94225829 to 94225955 126 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 178
Tssr62169 6 94229105 to 94229118 13 - TSS region transcription start site region 62169
Tssr62170 6 94241324 to 94241336 12 - TSS region transcription start site region 62170
D6Mit249 6 94249215 to 94249355 140 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 249
Tssr62171 6 94251474 to 94251478 4 - TSS region transcription start site region 62171